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Integrated Periphyton Biofilters In Marine Recirculating Aquaculture Systems, Adam N. Bell

USF Tampa Graduate Theses and Dissertations

Marine aquaculture is a growing industry that has the potential to reduce eutrophication, overfishing, and loss of biodiversity. Recirculating aquaculture systems (RAS) are a type of aquaculture system that decreases discharge, raises biological control, and conserves water; however, RAS are challenged due to high energy cost, low biodiversity, water quality control, and waste nutrients. Periphyton biofilters are a new technology that allows for feed production, water quality control, microbial diversity, and resource recovery in marine aquaculture systems. The overarching question that this dissertation investigates is, how can periphyton biofilters be integrated into RAS to address the challenges of modern sustainable …

Brain Metastasis-Associated Fibroblasts Secrete Fucosylated Pvr/Cd155 That Induces Breast Cancer Invasion, Emma Adhikari

USF Tampa Graduate Theses and Dissertations

Breast cancer (BC) continues to be the most diagnosed cancer and the second leading cause of cancer deaths in women worldwide. High mortality, in most cancers, is due to metastasis; BC is the most common source of one of the deadliest forms of metastasis–brain metastasis (BM) in female. Patients with triple negative breast cancer (TNBC) exhibit the highest incidence of BM and poorest survival outcomes upon diagnosis with BM. The prognosis of breast cancer brain metastasis (BCBM) remains poor because the blood–brain barrier (BBB) prevents the uptake of drug substances, including chemotherapeutic agents, targeted agents, and toxins, from the brain. …

Procedures For Assessment Of The Marine Carbon System And Evaluation Of Access And Ocean Acidification Literacy In The Deaf Community, Loraine Martell-Bonet

USF Tampa Graduate Theses and Dissertations

One major goal of this dissertation addresses the need for improved laboratory procedures to measure chemical changes in seawater caused by the uptake of atmospheric CO2, especially in coastal environments. Due to the proximity of anthropogenic stressors in the coastal zone, the biogeochemical complexity of the CO2 system is more dynamic than the open ocean. My principal research objectives were addressed by developing methods for (1) improving the accuracy of pH measurements over a wide range of salinities and (2) investigating the acid-base properties of natural organics in the coastal ocean.

The accuracy of pH electrode calibrations is affected when …

“I Was Doing The Best With What I Had”: Exploring Student Veterans’ Experiences With Community Reintegration, Food Insecurity, And Health Challenges, Jacquelyn N. Heuer

USF Tampa Graduate Theses and Dissertations

Food insecurity is a concern for many populations, including college students and military veterans. The impacts of food insecurity on student veterans are understudied, especially in relation to community reintegration and health. Employing the theoretical frameworks of structural violence and embodiment, this dissertation explores how community reintegration, food insecurity, diet quality, and health interact and influence one another among post-9/11 student veterans in Florida. In doing so, this dissertation considers how the experiences of student veterans are shaped by social inequities (i.e., structural violence) and how these experiences become embodied, thereby shaping student veterans’ health outcomes.

Utilizing findings from surveys …

Deep Learning-Based Automatic Stereology For High- And Low-Magnification Images, Hunter Morera

USF Tampa Graduate Theses and Dissertations

Quantification of the true number of stained cells in specific brain regions is an important metric in many fields of biomedical research involving cell degeneration, cytotoxicology, cellular inflammation, and drug development for a wide range of neurological disorders and mental illnesses. Unbiased stereology is the current state-of-the-art method for collecting the cell count data from tissue sections. These studies require trained experts to manually focus through a z-stack of microscopy images and count (click) on a hundred or more cells per case, making this approach time consuming (~1 hour per case) and prone to human error (i.e., inter-rater variability). Thus, …

Developing New Strategy Toward Ruthenium And Gold Redox Catalysis, Chenhuan Wang

USF Tampa Graduate Theses and Dissertations

This dissertation mainly contains three parts: 1) The discovery of triazole-modified Ru carbene catalysts for alkene metathesis and dynamic covalent chemistry; 2) The study of ligand assisted gold oxidative addition toward aryl iodide to achieve the alkene difunctionalization; 3) Gold redox catalysis via chiral P,N-chelating ligands. In the first part, the 1,2,3-triazole coordinated ruthenium carbene complexes (TA-Ru) were reported for the first time as a new class of modified Grubbs catalyst to achieve challenging olefin metathesis at higher temperatures without catalyst decomposition. With this new TA-Ru catalyst, cross-metathesis (CM), ring-closing metathesis (RCM) and dynamic covalent chemistry (DCvC) were achieved. The …

Booker Creek: Wet Season Water Quality Trends In A Florida Urban Stream, Alexandra M. Shostak

USF Tampa Graduate Theses and Dissertations

Booker Creek, a 1.9-mile stream with a 4.9-mi2 watershed, flows southeast through highly urbanized St. Petersburg, Florida, and empties into Bayboro Harbor, which connects with Tampa Bay. This study collected and analyzed water quality data for several parameters (TN, TP, nitrate-nitrite, ammonia, orthophosphate, chl-a, fecal coliform, dissolved oxygen, pH, turbidity, temperature, and salinity) every two weeks, at four different sites, during the 2022 wet season to characterize the current state and geographic variability of Booker Creek. Current creek sampling regimes, though consistent, do not sample at multiple sites along the creek. Urban streams do not display uniform water quality along …

“We Need To Figure Out Who We Are”: Reframing Manhood In An Online Discussion Forum, Tomas Sanjuan Jr.

USF Tampa Graduate Theses and Dissertations

In this thesis, I explore the potential of online communities in negotiating alternative forms of “doing” masculinity. I focus on the /r/bropill which is hosted on Reddit – home to thousands of active discussion forums called subreddits. I argue that the members of /r/bropill subreddit are attempting to redefine what it means to live your life not only as a man but as a “good man.” Using a purposive sample, I analyzed 24 discussions which totaled 1325 posts (n = 1325). I conducted a qualitative textual analysis of the original posts and comments inspired by grounded theory. My findings reveal …

Neuroendocrine Regulation Of Chemokine Receptor-Mediated Leukocyte Migration Via Heteromeric G Protein-Coupled Receptor Complexes, Garrett Enten

USF Tampa Graduate Theses and Dissertations

Neuroendocrine regulation of the innate immune system is a well-documentedphenomenon. The underlying mechanisms, however, are not well understood. Here we show that at least 20 members of the human chemokine receptor (CR) family heteromerize with one or more members of the α1-adrenergic receptor (AR) family and that all CRs, apart from CXCR1, heteromerize with arginine vasopressin receptor 1A (AVPR1A) in recombinant systems. These heteromeric complexes are detectable in human monocytes and the monocytic leukemia cell line THP-1. Though currently technical limitations prevent the direct visualization of endogenously expressed higher-order hetero-oligomeric receptor complexes, we provide evidence through functional analysis and proximity-based …

Cellulose Ester As Membranes For Controlled Release Fertilizer’S, Muhammed Salman Fajis

USF Tampa Graduate Theses and Dissertations

Growing environmental pollution and non-sustainable materials has escalated the need for research in sustainable practices for many areas including crop production and fertilization. The conventional coating for the controlled-release fertilizers (CRFs) is non-biodegradable. Hence, the development of novel biodegradable coatings for fertilizer prills has emerged as an important area of study. In this thesis, conducting synthesis and application of cellulose esters (biomass membrane) as an encapsulation for the controlled release fertilizers. Therefore, the coating would be effective for a controlled release of nutrients to the crops by sustaining nature. Here, synthesized biodegradable cellulose esters by 8 and 16-carbon fatty acids …

Affordances And Limitations Of Molecular Representations In General And Organic Chemistry, Ayesha Farheen

USF Tampa Graduate Theses and Dissertations

Molecular representations that show chemical bonding are ubiquitous in general and organic chemistry. These help in communicating chemistry concepts that are fundamental to understanding how and why molecules interact. The goal of this dissertation work is to offer an evidence-based report on the affordances and limitations of the variety of molecular representations by chemistry topic. The variety of representations investigated are chemical formula, Lewis dot structure, line-angle diagram, ball and stick, space filling, and electrostatic potential maps. Five studies were conducted with general and organic chemistry students and three key findings emerged. First, affordances and limitations of molecular representations are …

Red Mangrove (Rhizophora Mangle) Recruitment And Retention Dynamics On Eastern Oyster (Crassostrea Virginica) Reefs In A Subtropical Estuary, Noreen Selma Mathews

USF Tampa Graduate Theses and Dissertations

Mangroves are invading oyster reefs in areas no longer impacted by winter freezes and completely transforming them into mangrove islands. The mechanisms influencing the transition between these two habitat states remain unclear. Here, I test experimentally whether oyster reef (Crassostrea virginica) structure directly facilitates red mangrove (Rhizophora mangle) propagule capture via differences in propagule retention and successful mangrove establishment. In addition to oyster reef structure, I compared physical reef features of size, elevation, and wind-wave exposure to uncover whether these traits influenced mangrove retention. Recently- abscised red mangrove propagules were inserted onto 21 oyster reefs across 5 sites in Tampa …

Wastewater Treatment Using Encapsulated Chabazite In Polyvinyl Alcohol-Sodium Alginate Hydrogel Biofilm Carriers, Susieanna Nevada Persaud

USF Tampa Graduate Theses and Dissertations

Nitrogen discharge from wastewater is a global issue and with increased urbanization as well as industrialization, it has become even more essential to develop more efficient wastewater treatment systems. The dominant form of nitrogen in wastewater is ammonium. Biological oxidation of ammonium to nitrite and nitrate is the first step in biological nitrogen removal processes. If left untreated, nitrogen can cause toxicity to aquatic life, unsafe changes in water quality, and eutrophication.

Biofilm carriers can help to improve the efficiency of traditional activated sludge wastewater treatment systems by reducing operating costs and reducing hydraulic retention time. Biofilm carriers also promote …

Labile Dissolved Nickel (Ni) Concentrations In The North Pacific, Calyn M. Crawford

USF Tampa Graduate Theses and Dissertations

Nickel (Ni) is an important micronutrient for phytoplankton and bacteria that serves as a required co-factor in several metalloenzymes. Despite these known biological uses, total dissolved Ni concentrations remain elevated in global surface waters, in contrast to the surface depletion commonly observed for macronutrients and other nutrient-type trace elements. A prevailing hypothesis for the muted depletion of dissolved Ni concentrations in surface waters is that dissolved Ni in seawater is not in a bioavailable form. The chemical lability of Ni in seawater provides insight into Ni speciation and bioavailability, but few measurements have been made in the open ocean to …

The Sun Shines On Us, Too: Bobby Smith And Tampa's Early Lgbtq Community, Connor G. Lasseter

USF Tampa Graduate Theses and Dissertations

Bobby Smith (1923-2008) was a Tampa Bay butch lesbian, photographer, and earlyLGBTQ Florida figure, together with his partner of nearly fifty years, Katherine “Kay” Thompson (1923-2009). Coming of age as the Second World War provided women and girls with a certain level of independence, Smith easily found comfort presenting in a masculine, butch fashion outside of certain spheres such as school, and quickly dropped any remaining femininity once he left it. Throughout his life, in the workplace, at social gatherings, and at home, he maintained a masculine presentation for his entire life. As a photographer, Smith documented numerous photographs of …

Time-Series Analysis Of Coral Reef And Reef-Fish Biodiversity In The Florida Keys National Marine Sanctuary, Cara L. Estes

USF Tampa Graduate Theses and Dissertations

The general decline in coral-reef ecosystem health throughout the Caribbean between the 1970’s and late 1990’s seems to have slowed down or stopped, with only slight decreases in coral reef cover observed in the 2000’s through 2019. The earlier decline can be attributed to many different local and regional stressors that have acted together, and include naturally occurring (hurricanes, diseases) and anthropogenic pressures (increased sedimentation, fishing). These ecosystems provide a range of services to people, including food and protection from storms, with an annual benefit of billions of dollars. This has driven a desire to better understand these ecosystems. The …

Mining Multibeam Transit Data For Deep Ocean Polymetallic Nodules: Case Study In Se Pacific Ocean, Mark E. Mussett

USF Tampa Graduate Theses and Dissertations

Occurrences of nodules on the seafloor represent benthic habitats and present potential deposits of economically important metals. Better understanding their extent throughout Earth’s oceans will aid in resource management and determining different factors which influence their formative factors and respective local characteristics. Multibeam bathymetry and backscatter data, along with auxiliary data suggest an area of seafloor near the Foundation Seamount chain in the southern Pacific Ocean, centered around -36.84° latitude, -119.75° longitude, contains a previously uncharted polymetallic nodule occurrence. Our analysis of Simrad EM12 DUAL (12 kHz) multibeam data, collected during a 1997 transit, shows an area of strong backscatter …

Discovery Of Small-Molecule Inhibitors For The Β-Catenin/B-Cell Lymphoma 9 Protein-Protein Interaction., Zilu Li

USF Tampa Graduate Theses and Dissertations

The Wnt/β-catenin signaling pathway is associated with activating genes that support cell proliferation, differentiation, and survival. Excessive activation of Wnt/β‐catenin signaling has been associated with development of several types of cancer and activation of stem-like cancer cells. Direct targeting of β‐catenin, the central hub in this signaling pathway, is a promising strategy to suppress the hyperactive β‐catenin signaling but has proven to be highlychallenging. Substantial efforts have been made to discover compounds that bind with β‐catenin, block β‐catenin mediated protein–protein interactions (PPIs) and suppress β‐catenin signaling. β‐catenin/BCL9 PPI has a smaller contacting area (1450 Å2) and a moderate binding affinity …

Regulated Intramembrane Proteolysis By M82 Peptidases: The Role Of Prss In The Staphylococcus Aureus Stress Response, Baylie M. Schott

USF Tampa Graduate Theses and Dissertations

Staphylococcus aureus is a major threat to human health, which is only exacerbated by its resistance to methicillin and other frontline antibiotics. Consequently, annual hospitalizations resulting from methicillin-resistant Staphylococcus aureus (MRSA) have been recorded in the hundreds of thousands for decades. However, the global impact of this opportunistic pathogen cannot solely be attributed to its antibiotic resistance, as S. aureus is also an expert at adapting to host conditions and responding to external stress. Here we attempt to gain a better understanding of a S. aureus factor that aids in circumventing such external insult - PrsS - a membrane protease …

Hurricanes And Tropical Storms’ Impact On Water Quality In Lake Okeechobee, Florida, Daniela Vasquez Diaz

USF Tampa Graduate Theses and Dissertations

Hurricanes are natural events with catastrophic outcomes, while climate change's effects on their intensity and frequency remain discussed. However, it is crucial to analyze these through models and statistics to understand their behavior and impact on the basins. Particularly in lakes on tropical coasts since disruptive events such as hurricanes tend to be highly affected. Lake Okeechobee is a unique lake located in Florida and one of the largest freshwater lakes. The lake and some of its significant stations are the locations chosen to perform the investigation. The main focus of the investigation is determining the effect that hurricanes have …

Patterns In Biodiversity And Community Assemblage In Macrofaunal Fouling Communities On Tampa Bay Floating Docks, Cassidy C. Bell

USF Tampa Graduate Theses and Dissertations

Understanding biodiversity trends of highly disturbed urban landscapes is essential as anthropogenic factors continue to drive global biodiversity loss. Within marine ecosystems, macrofaunal fouling communities, aggregations of epibenthic invertebrates that colonize human-made structures, represent an ecologically important subset of urban coastlines. Tampa Bay is a highly urbanized estuary in Florida, USA, and is home to the state’s largest port, Port Tampa Bay. This makes the bay a prime site for the introduction of new species, with many organisms either considered invasive or cryptogenic, their origins left unclear. Many factors may contribute to the communities that form on urban structures including …

Knowledge Integration In Domain-Informed Machine Learning And Multi-Scale Modeling Of Nonlinear Dynamics In Complex Systems, Phat K. Huynh

USF Tampa Graduate Theses and Dissertations

Nonlinear dynamical systems have been extensively used to model various phenomena in the changing world around us, especially in science and engineering fields. Thanks to breakthrough advancements in sensing technologies, an increasingly high volume of multi-modal sensor data has been collected, which enables us gain better insights into complex systems dynamics and build sophisticated data-driven machine-learning-based dynamic models without having the access to the underlying governing equations. However, integrating domain-specific knowledge in machine learning algorithms remains pivotal for various reasons: it promises enhanced predictive accuracy, better model interpretability, and increased generalizability. This dissertation delves into three core research questions, each …

Analyzing Multi-Robot Leader-Follower Formations In Obstacle-Laden Environments, Zachary J. Hinnen

USF Tampa Graduate Theses and Dissertations

Observations in biological formation from nature likes flocks of birds, herds of mammals and packs of wolves have inspired the innovation of robotic architectures. This thesis presents an approach that aims to use robotic systems to mimic leader-follower behaviors in the navigation and formation of sparse and dense environments. The goal of this work is to extend and further analyze the original work of Weitzenfeld et al [3] to evaluate new swarm and pack based multi-robot architectures with the inclusion of obstacle avoidance and variations in group formations. The multiple robot architecture is based off a wolf pack with a …

Chemical Analysis Of Metabolites From Mangrove Endophytic Fungus, Sefat E Munjerin

USF Tampa Graduate Theses and Dissertations

Natural products hold a significant place in drug discovery for their abundant and unique secondary metabolites. These secondary metabolites which encompass a range of organic compounds such as alkaloids, phenols, peptides, flavonoids, polyketides, and terpenoids, can easily be exploited for drug development. Endophytic fungi, residing harmoniously with its host, have emerged as generous producers of bioactive secondary metabolites, displaying efficacy against a wide array of human pathogens, including the challenging ESKAPE pathogens.

The research explores endophytic fungi and their prospective for drug discovery and development through the synthesis of distinctive secondary metabolites. Endophytic fungus, HM13-26C-2B, collected from Honeymoon Island, Florida …

3d Musculoskeletal Analysis Of The Rhea Americana Forelimb And Implications For The Evolution Of Avian Flight, Sarah Elizabeth Guzinski

USF Tampa Graduate Theses and Dissertations

To understand the evolutionary gain, and loss, of avian powered flight, attention must be paid to the wing morphology of species across these transitions. However, paleognaths, while being the most well-known flightless birds, have greatly understudied forelimbs. Additionally, current literature regarding their forelimb anatomy generally lacks a three-dimensional (3D), biomechanical approach. Among the flightless paleognaths, the rhea is notable in having the least reduced forelimb. Though not used for flight, the wings of rheas are used in other behaviors such as courtship and threat display, as well as nest defense. In this study, I investigate the forelimb anatomy of an …

Stable Isotope Analysis On Yellowfin And Blackfin Tuna Eye Lenses Reveals Life History Patterns In The Gulf Of Mexico, Kylee M. Rullo

USF Tampa Graduate Theses and Dissertations

Spatial geography, ontogenetic movement, and trophic patterns of mobile species are key elements of effective marine resource management. A number of methods are currently available for tracking movements of pelagic migratory species, including the use of conventional and electronic tags. However, tagging campaigns can take years to provide useful data, can be expensive, and only capture a portion of a fish’s lifetime. For this project, I used stable-isotopic ratios of nitrogen (δ15N) and carbon (δ13C) in metabolically inert, chronologically-layered fish-eye lenses to explore lifetime movement and trophic patterns of yellowfin tuna (Thunnus albacares) and blackfin tuna (Thunnus atlanticus) in the …

Developing A Point-Of-Care Detection Kit For Parkinson’S Disease Using Gold Nanoparticle-Based Lateral Flow Assay, Ali Aljassabi

USF Tampa Graduate Theses and Dissertations

Parkinson’s disease (PD) is the second most common neurodegenerative disease after Alzheimer’s disease and the fastest-growing neurodegenerative disorder in the world. The major issue with PD is that it takes several years of biological changes until the patient starts to experience physiological symptoms that could affect their daily lives. The major hallmark of PD is the appearance of Lewy body inclusions in the neuron’s cytoplasm, which is rich in a protein called α-Synuclein (α-Syn). Several studies have shown that the levels of α-Syn in blood increase because the excess α-Syn is released from neurons into the bloodstream through extracellular vesicles. …

Spatial Structure Of Germination And Seed-Associated Fungi In Tropical Pioneer Seeds, Daniela Varon Garcia

USF Tampa Graduate Theses and Dissertations

Negative density-dependent regulation is the process by which host-specific natural enemies reduce the survival of seeds and seedlings of conspecifics near adult trees, favoring heterospecific recruitment, and ultimately increasing local diversity. Negative density-dependent regulation by fungal pathogens has been consistently reported to promote plant diversity in the tropics, even though they tend to be multi-host and host-specificity is rarely reported. Nevertheless, evidence suggests that host-generalist fungi can have host-specific effects that produce disproportionate negative effects on some plant species but not others, promoting regional diversity. However, such studies have not tested for both host-specificity and distance-dependent effects in fully replicated …

Entanglements Of Teenage Food Security Within High School Pantries In Pinellas County, Florida, Karen T. Díaz Serrano

USF Tampa Graduate Theses and Dissertations

Food insecurity has the ability to shape an individual’s or a family’s everyday life and take emotional, psychological, and physical tolls. Among adolescents, not having access to nutritious food could lead to physical effects during growth and development. Moreover, the stress and anxiety of not knowing where their next meal is coming from and the social stigma associated with being food insecure can have negative effects on mental health. A recent solution to these issues is locating food pantries in high schools. Purpose: This exploratory study examined how high school students in Pinellas County, Florida perceive the use of a …

A Queered Exhibition: Lgbtqia+ Artists Expressing Identity And Visibility Through Art-Based Research, Christy D. Paris

USF Tampa Graduate Theses and Dissertations

Too often museums, galleries, and art curriculum ignore or erase the lives and art of LGBTQIA+ individuals. This exhibition aimed to make the diverse lives and art from the queer community visible. Integrating queer perspectives and visibility is empowering and creates a sense of belonging. Queering the art world can present alternative perspectives, promote diversity, and provide exposure to a more inclusive experience for all. The aim of this inquiry is to inform institutional practices within museums on queer inclusivity and further scholarship on this topic by engaging with the queer art community and public during an exhibition held in …