Digital Commons Network^™

Brain-Inspired Spatio-Temporal Learning With Application To Robotics, Thiago André Ferreira Medeiros

USF Tampa Graduate Theses and Dissertations

The human brain still has many mysteries and one of them is how it encodes information. The following study intends to unravel at least one such mechanism. For this it will be demonstrated how a set of specialized neurons may use spatial and temporal information to encode information. These neurons, called Place Cells, become active when the animal enters a place in the environment, allowing it to build a cognitive map of the environment. In a recent paper by Scleidorovich et al. in 2022, it was demonstrated that it was possible to differentiate between two sequences of activations of a …

Determining The P-Wave Velocity Structure In The Near-Surface Of Nw Miami, Florida, Using Quarry Blasts, Elham Moslemi

USF Tampa Graduate Theses and Dissertations

The fact that Florida is an earthquake-free region has caused seismologists to pay less attention to it. Few earthquakes in this state mean it is not a usual practice to study the propagation of seismic waves. However, utilizing data from quarry blasts, we studied wave propagation in this region. The primary objective of the project is to investigate the near-surface P-wave velocity structure and factors that may affect it. We also analyzed the amplitude of signals versus distance and blast size. A network of up to 10 Raspberry Shake instruments around the NW Miami-Lakes mining area was deployed where four …

Methods For Analytical And Biophysical Analysis For Investigation Of Stimulator Of Interferon Genes In Drug Discovery, William Emmett Brian Lawless

USF Tampa Graduate Theses and Dissertations

This work elaborates on analytical and biophysical techniques including high pressure liquid chromatography (HPLC), mass spectrometry quadrupole time-of-flight (MS-QToF), dynamic light scattering (DLS), microscale thermophoresis (MST), surface plasmon resonance (SPR), isothermal calorimetry (ITC), size exclusion chromatography, and native gel electrophoresis. A basic overview is described for each technique and is designed for easy understanding by both novice and experienced analysts. Best practices for each technique are discussed and suggestions are made for protocol improvements or troubleshooting. Protocol development is discussed, and a method is introduced for MST that can be adapted to any target protein for rapid screening of analog …

Integration Of Algae And Biomass Processes To Synthesize Renewable Bioproducts For The Circular Economy, Jessica Martin

USF Tampa Graduate Theses and Dissertations

Rapid population growth and global industrialization have substantially heightened the demand for fossil-based fuels and products in various sectors of the global economy, including energy production, transportation fuels, and as raw materials for petrochemicals. The intense consumption of fossil fuels has caused immense environmental impacts, especially pertaining to carbon dioxide emissions. Shifting to renewable feedstocks (raw materials) is expected to reduce these emissions by lowering the carbon footprint of fuels and products compared to traditional fossil-derived alternatives. This transition aligns with the goal of creating a sustainable and circular economy, emphasizing efficient resource use, and reducing waste generation through recycling …

Multi-Model Digital Twins With Ai Forecasting For Seed To Stand Supply Chain, Rania Sherif Elashmawy

USF Tampa Graduate Theses and Dissertations

The present dissertation embodies a multi-faceted investigation aimed at enhancing strawberry production pre-harvest and post-harvest quality through data-driven approaches. It unfolds multi-stages framework.

The first stage presents a complete data collection and its preliminary statistical analysis obtained from the first phase of a large-scale soil study on how to improve strawberry production and achieve sustainable and high-quality harvests through sensor-assisted real-time field monitoring. Six real-time loggers were placed in an operational commercial strawberry farm in Central Florida for the entirety of a harvest season from soil preparation to planting to harvesting. Along with high-resolution soil sensory measurements including water content, …

Swelling Induced Buckling Of Photopatterned Hydrogel Beams, Chinar Yogesh Kokaje

USF Tampa Graduate Theses and Dissertations

The main goal of this study was to learn more about swelling induced buckling of surface-attached gel lines photo-patterned from thermally responsive polymers. A library of 10 different polymer compositions was synthesized using methacryloyloxybenzophenone (MABP) as the photo-cross-linking monomer. For each of the polymers, a series of beam-like patterns were prepared on polystyrene tissue culture dishes by first depositing a known amount of polymer into the tissue culture dish followed by pattern generation using a photo-lithography mask with line widths of 10, 20, 30, 50, and 80 μm. The target height of each polymer line was 100 μm. After development …

In Silico And In Vitro Drug Discovery Strategies And The Chemical Investigation Of Endophytic Fungi, Sarah Grace Dietrick

USF Tampa Graduate Theses and Dissertations

The biodiversity of our global marine ecosystems provides substantial treasure to discover: chemistry. Marine organisms that live in proximity to one another use their unique chemistry to compete with one another and thrive in their environment. Benthic invertebrates, specifically, that lack physical means of protection will produce secondary metabolites as a means of defense from their surroundings and predators. The compounds which they produce are ordinarily species-specific, highly diverse biomolecules. Biosynthetic processes within an organism construct these secondary metabolites from fragments of primary metabolites (amino acids, fatty acids, sugars, and so on). Their roles in protection have antibiotic, toxic, and …

Student Perceptions Of The Nonmedical Use Of Prescription Stimulants And Preferences For Health Education, Ana Gutierrez

USF Tampa Graduate Theses and Dissertations

Nonmedical use of prescription stimulants (NMUPS) for the purpose of improving academic performance is a growing concern among the college population. According to the Substance Abuse and Mental Health Services Administration in 2020, rates of NMUPS were highest among 18–25-year-olds attending college. There are several adverse health outcomes associated with NMUPS, including cardiovascular damage, seizures, psychosis, and dependence. Given the rising rates of NMUPS in this group, and the negative health outcomes associated with NMUPS, it is vital to employ health education that allows students to make informed decisions about behaviors that impact their health. The purpose of this study …

All Quiet On The Digital Front: The Unseen Psychological Impacts On Cybersecurity First Responders, Tammie R. Hollis

USF Tampa Graduate Theses and Dissertations

Driven by the increasing frequency of cyberattacks and the existing talent gap between industry needs and skilled professionals, this research study focused on the crucial human element in the domain of cybersecurity incident response. The objective of this dissertation was to offer a meaningful exploration of the lived experiences encountered by cybersecurity incident responders and an assessment of the subsequent impacts on their well-being. Additionally, this study sought to draw comparisons between the experiences of cybersecurity incident responders and their counterparts in traditional emergency response roles. Semi-structured interviews were conducted with a cohort of 22 individuals with first-hand experience working …

Syntheses, Photophysics, & Application Of Porphyrinic Metal-Organic Frameworks, Zachary L. Magnuson

USF Tampa Graduate Theses and Dissertations

Porphyrins are a group of heterocyclic macrocycles that play crucial roles in various biological processes such as electron transfer, catalysis, and sensing. Hemoglobin, which carries oxygen in the blood of mammals, and chlorophyll, which drives photosynthesis in plants and algae, are both porphyrins. The ability of porphyrins to bind metal ions and their unique electronic and photophysical properties make them an excellent platform for designing functional materials for various applications, often drawing inspiration from their function in nature. Metal-organic frameworks (MOFs) are a class of porous materials that have been extensively studied in recent years due to their high surface …

Synthetic Studies Of Potential New Ketogenic Molecules, Mohammad Nazmus Sakib

USF Tampa Graduate Theses and Dissertations

The ketogenic diet has gained popularity in the past few decades among people and physicians due to its various health benefits. A significant amount of research has been done for the modification of the original ketogenic diet and investigation of its potential health benefits. However, synthesis of novel ketogenic compounds as a dietary supplement has not received the same level of attention. That is the primary objective of this research project. The first chapter of this manuscript describes the synthesis of various short and medium chain esters of different polyols that have been done so far, and areas of their …

Saudi Mothers’ Perspectives And Experiences About Family-School Partnership In Early Childhood: A Qualitative Study, Mona Mohsen Alzahrani

USF Tampa Graduate Theses and Dissertations

In this study, I explored Saudi mothers’ perspectives on family-school partnerships, besides understanding the challenges they had faced. I used the ecological theoretical framework, to understand the complexity of the relationships between family and school and the impact of the environment on children's development. The ecological theory allowed me to simplify these relationships and recognize the effect on the children's development by examining Saudi mothers' perspectives. I selected qualitative research to gain a better thoughtful of the complex phenomena. I conducted semi-structured interviews to gain a deeper understanding of mothers’ perspectives. I applied a thematic analysis by Clark and Braun …

Machine Learning For Electronic Design Automation: Specification Mining And High-Level Synthesis, Md Rubel Ahmed

USF Tampa Graduate Theses and Dissertations

The rapid growth of complex system-on-chip (SoC) designs has presented unprecedented opportunities and challenges in electronic design automation (EDA). This dissertation explores two facets of electronic design automation: message flow specification mining using data mining and natural language processing (NLP) and high-level synthesis (HLS) acceleration using different machine learning (ML) methods. It also discusses an ML model co-optimization method for energy-efficient hardware implementation.

Effective SoC design validation relies heavily on message flow specifications. This dissertation presents an efficient technique for synthesizing finite state automaton (FSA) models from SoC execution traces. The synthesized models can provide valuable insights into the on-chip …

Influence Of Thickness And Capping Materials On The Static And Dynamic Properties Of Ferrimagnetic Thin Films, Noha Alzahrani

USF Tampa Graduate Theses and Dissertations

Spintronics traditionally relied on ferromagnetic materials for their strong spin properties but facedissues like large stray magnetic fields. To address these challenges, researchers turned to antiferromagnetic materials with fast spin dynamics, due to their zero net magnetic moment but the lack of a net spin moment complicated operation. In this context, ferrimagnetic materials have emerged as promising alternatives. They combine ferromagnetic and antiferromagnetic traits and feature different magnetic ions in their sublattices. This dissertation explores how film thickness and capping materials affect the properties of ferrimagnetic thin films. Rare-earth transition metal ferrimagnetic amorphous alloys have garnered attention in the realm …

The Contextualization Of Socioscientific Issues In An Age Of Accountability, Karrie A. Wikman

USF Tampa Graduate Theses and Dissertations

The overarching aim of this research was to ultimately support global resiliency through science education, preparing citizens to laudably negotiate the contentious socio-cultural science- and technology-based issues of modern times. Correspondingly, this mixed methods study aimed to move a large, diverse school district toward school environments conducive to contextualized socioscientific issues (SSI)-based learning. Of interest to teachers, administrators, and policymakers, the research investigated the effects of subsuming standards-based objectives within the SSI instructional framework on science achievement. Analysis of variance of multilevel assessment and classroom observation protocol data revealed that students experiencing the SSI intervention showed statistically significant gains in …

Refining The Machine Learning Pipeline For Us-Based Public Transit Systems, Jennifer Adorno

USF Tampa Graduate Theses and Dissertations

According to the Population Division of the United Nations, in the United States, almost 90% of the population will live in urban areas by the year 2050. As the population in a given area increases, higher traffic congestion follows due to an increase of vehicles in the road. A possible way to alleviate congestion could be with widespread use of public transit. However, according to the US Census Bureau, the percentage of individuals commuting through public transportation has been decreasing steadily over time, and the American Community Survey reports that during 2019, only around five percent of the US population …

Optimizing The Dynamic Replacement Of Soft Soils With Sand Using A Fem Tools, Walid Salem A Elsiwi

USF Tampa Graduate Theses and Dissertations

First a dynamic finite element methodology (FEM) was developed to simulate an entire dynamic replacement (DR) program of clay with sand involving multiple poundings. The main objective of this research was to employ FEM and geotechnical test data such as cone penetration test (CPT) data at the site to predict the maximum achievable sand column (SC) depth and the corresponding optimum levels of attributing parameters such as number and height of pounder drops. Another goal was to predict the pore pressure generated in clay due to pounding. A full-scale ground improvement project was used to guide the analytical process. Comparison …

An Empirical Analysis Of Sentiment And Confidence Regarding Interest Rates In Disclosures Of Public Firms In The U.S. Fintech Sector, James J. Farley

USF Tampa Graduate Theses and Dissertations

This dissertation studied the channel of communication of 10-K and 10-Q financial reports and the effectiveness of relaying interest rate sentiment. 10-K financial reports relay information regarding a company’s financials on a yearly basis while 10-Q reports relay information on a quarterly basis. To study a newer industry of Fintech and how it may be affected by interest rates it was necessary to narrow Fintech to the United States and a coordinated public channel of communication using the 10-Q and 10-K financial reports. Fintech emerged as a relevant word and industry coming off the Great Recession of 2009. During the …

Big Data Analytics For Healthcare Social Media: New Algorithms And Insights, Negar Maleki

USF Tampa Graduate Theses and Dissertations

Over the last two decades, there has been a rapid evolution in information and communication technology, including the emergence of social media. Social media has a significant impact on various fields such as politics, business, culture, education, careers, innovation, and especially healthcare. This influence is not a new phenomenon since a survey from ten years ago showed that up to 78\% of American adults used the internet to look for health-related information for themselves or someone else. With the shift towards on-demand services in society, healthcare is also affected by this trend. Instead of waiting for weeks or months to …

Human Vs Machine: Hyper-Realistic Avatars And Their Efficacy As A Communication Channel, Jill S. Schiefelbein

USF Tampa Graduate Theses and Dissertations

Hyper-realistic avatars (HRAs), a form of synthetic media, are custom-created digital embodiments of a human, created by capturing and combining that person’s video and vocal likeness. This is the first known study of the efficacy of videos delivered by hyper-realistic avatars as a communication channel in comparison to videos delivered by their human counterparts. An experiment testing how information retention, engagement, and trust vary between viewers of videos delivered by a real human, videos delivered by the HRA representing that same human, and videos delivered by the HRA that discloses to viewers that it is a hyper-realistic avatar is presented. …

Utilizing Binding-Based Proteomic Profiling And Mass Spectrometry Imaging As Innovative Tools For Lipid Research, Suzeeta Bhandari

USF Tampa Graduate Theses and Dissertations

Mass spectrometry-based omics research involves global identification and quantification of molecules in the biological system, which can form the basis of the multi-omics approach integrating multiple layers of information to provide a comprehensive overview of systems biology. The investigation of fatty acid amides (FAA) is one such research avenue that benefits significantly from the high-throughput, multi-level, and interdisciplinary approach of integrative omics. Currently, FAA research is dominated by lipidomic-based studies that have successfully identified and quantified >100 different FAAs in different model systems. Few studies are credited with exploring the biological function and evolution of FAA-dependent signaling pathways. Previous literature …

Interdependency Between Water And Road Infrastructures: Cases And Impacts, Shihab Uddin

USF Tampa Graduate Theses and Dissertations

This dissertation studies the interdependency between road and water infrastructures and associated interdependency impact on these two critical infrastructure systems. Critical infrastructures and the interdependency among these infrastructures have gained much attention recently because of its growing complexity, importance, and vulnerability to natural and man-made threats. In response, researchers have spent significant effort to study these infrastructures individually as well as when they are interdependent to understand complex interdependency relationship and to figure out ways to make these infrastructures more reliable, robust, and resilient. However, water and road infrastructure systems have not been studied as vastly as other critical infrastructures …

Social Justice Integration In Stem Content With Early Childhood Education Pre-Service Teachers, Elyse D. Ledford

USF Tampa Graduate Theses and Dissertations

Following the social justice education ideal of building from local sources of knowledge the purpose of this multi-case study was to develop describe and explain the ways pre-service teachers examined how pre-service teachers make use of social justice pedagogies in teaching STEM. The study was guided by the following research questions: In what ways do pre-service teachers make us of social justice pedagogies while planning STEM lessons for young children? In what was do pre-service teachers enact social justice pedagogies in STEM instruction for young children? This study explores the experience of three Early Childhood Education pre-service teachers who were …

Advanced Multiscale Molecular Dynamics Simulations Of Amorphous Polymers, Sahar Zenoozi

USF Tampa Graduate Theses and Dissertations

Polymers are in a wide range of material forms with various resources, including natural to synthetic processes. Polymers consist of covalently bonded monomers to each other. The chain length of polymers varies from a few monomers to thousands of monomers. This wide range of chain length enables polymers with attractive capabilities of chemical and physical properties. Thus, polymers are highly attractive in different scientific and industrial applications such as drug delivery, optical coatings, catalysts, semiconductors and organic photovoltaics. This work has combined updated accurate methods for accurate initial conformations, and modified force field parameters to produce a generalized method for …

Trace Metal Cycling During Phytoplankton Growth In The Southern Ocean, North Pacific, And Tampa Bay, Shannon Michelle Burns

USF Tampa Graduate Theses and Dissertations

The trace metals iron (Fe), manganese (Mn), cobalt (Co), nickel (Ni), copper (Cu), zinc (Zn), and cadmium (Cd) are essential to primary production in the oceans. They act as micronutrients, used in intracellular enzymes for macronutrient acquisition, light harvesting, and mediation of reactive oxygen species. In some cases, they can also substitute for each other when a primary trace metal micronutrient is depleted. Characterizing the interplay amongst trace metals, macronutrients, and phytoplankton growth is vital for understanding the biogeochemical underpinnings of primary production, and for modelers who develop biological pump frameworks for global carbon cycling.

In Chapter two, I investigated …

Investigating Mobility In The Northern Balkans During The Fifth Millenium Bc Through Strontium Analysis Of Human Tooth Enamel, Aurélien Tafani

USF Tampa Graduate Theses and Dissertations

This research investigates how individual mobility among ancient populations in Romania during the Eneolithic, between 5000 and 4000 BC, may be related to the spread of the material culture known as Kodjadermen-Gumelniţa-Karonovo VI (KGK VI) that extended over most of southern Romania and Bulgaria. This work seeks to combine results on individual mobility with other lines of archaeological evidence to provide a better understanding of the social context and kinship relationships that were in place when these events took place.

Strontium isotopic analyses were performed on 130 individuals from two sites located in the southern Romania: 49 from Sultana and …

Using Social Network Analysis To Measure And Visualize Student Clustering Within Middle And High Schools, Geoffrey David West

USF Tampa Graduate Theses and Dissertations

The dominant philosophy of American public schools has been to group students together based on similar characteristics. Known as tracking, high achieving students would take courses on the “college track” while others would take “career track” courses. It was not long until advocates noticed that this process unfairly advantaged affluent and White student over poor and minoritized groups. A new process called “ability grouping” took over where tracking left off, but to the same effect. It is difficult to measure the degree students are grouped together by a certain characteristic, and while a few research papers aim to do so, …

Deciphering Trends And Tactics: Data-Driven Techniques For Forecasting Information Spread And Detecting Coordinated Campaigns In Social Media, Kin Wai Ng Lugo

USF Tampa Graduate Theses and Dissertations

The main objective of this dissertation is to develop models that predict and investigate the spread of information in social media over time. In this context, we consider topics of discussions as the information that spreads. Thus, we are interested in forecasting the number of messages per day in a future interval of time. We take a data-driven approach, in which we compare our results with real datasets from a multitude of socio-political contexts and from multiple social media platforms, specifically, Twitter and YouTube.

We identified a number of challenges related to forecasting social media time series per topic. First, …

Coupling Chemical And Genomic Data Of Marine Sediment-Associated Bacteria For Metabolite Profiling, Stephanie P. Suarez

USF Tampa Graduate Theses and Dissertations

Marine sediment-associated bacteria house many new and exciting novel secondary metabolites. These metabolites can be tested for bioactivity against various types of cancer and fungal, bacterial, and viral infections. In this thesis, we investigated the combination of biosynthetic gene cluster information with mass spectra to perform a chemical profiling of sediment- associated bacteria. Furthermore, we utilized a scoring technique to provide an identification and confidence score to each annotated compound. The sediment was collected from east Arthur Harbor, Palmer Station, Antarctica, at depths of 20 ft and 60 ft. After plating on agar, 52 unique bacterial strains were isolated, with …

Examining Paleoshorelines In The Eastern Gulf Of Mexico: Insights On Sea Level History And Potential Areas Of Interest For Habitat Management, Catalina Rubiano

USF Tampa Graduate Theses and Dissertations

An inventory of multibeam bathymetry containing relict drowned and lithified paleoshorelines has been compiled and analyzed in the first ever shelf-wide investigation of paleo sea level indicators on the west Florida shelf (WFS). On the largest scale, the WFS is a wide and gently sloping terrain that is characterized by a carbonate-rich sediment regime. This framework coupled with the region’s tectonic stability provided a setting in which sea level changes since ~ 20 ka have been recorded to a remarkable degree of resolution in the form of paleoshorelines which formed at sea level and were subsequently drowned and preserved in …