Digital Commons Network^™

A System Dynamics Model Of Soil Carbon Stock And Flows In Grasslands Under Climate And Grazing Scenarios., Deirdre Sommerlad-Rogers

Master's Theses

Carbon sequestration is paramount to reducing climate change. Grasslands, representing 40% of all terrestrial area, can serve as a primary sequestration location if optimal management strategies can be realized. This study used system dynamics modeling to examine the temporal dynamics of carbon stocks and flows in response to grass species composition, grazing intensity, and temperature and precipitation changes at the landscape level. While there are other biogeochemical models in existence, they are either meant to model large areas, including globally, or are meant to be at a farm level and have limited plot sizes, limiting the options for rangeland managers …

An Artificial Neural Network For Bankruptcy Prediction, Walter D. Magdefrau

Master's Theses

Assessing the financial health of organizations remains a topic of great interest to economists, financial institutions, and invested stakeholders. For more than a century, research into financial distress has focused primarily on traditional applications of statistical analysis; however, modern advances in computational efficiency have created a significant opportunity for more sophisticated approaches. This thesis investigates the application of artificial intelligence on company bankruptcy prediction. The proposed neural network model is evaluated using the Polish Companies Bankruptcy dataset and yields a 5-year prediction accuracy of 96.5% and an AUC (area under receiver operating characteristic curve) measure of 92.4%.

Evaluation Of Masculinization Treatments To Produce Feminized Hemp Seed (Cannabis Sativa L.), Ted Fitzgerald, J. Wyatt Brown

Master's Theses

Cannabis sativa L. (hemp) develops plants with either male or female flowers, and growers of hemp greatly prefer female flowers which bear the glandular trichomes that contain cannabinoids. Feminized (all female) seeds are highly desired, which are produced by crossing a female plant with a masculinized female plant. Masculinization is achieved through the inhibition of ethylene and/or addition of gibberellins before flower initiation in female plants. The hemp industry uses silver thiosulfate (STS) to masculinize hemp, but spraying silver poses environmental concerns. This study compared STS to three other ethylene-inhibiting agents: aminoethoxyvinylglycine (AVG), cobalt nitrate (CBN), and 1-methylcyclopropene (1-MCP). Treatments …

Reciprocal Transplant And Machine Learning Study Of Oak Mistletoe On Three Host Oak Species In Santa Margarita, California, Ella Abelli-Amen

Master's Theses

At Santa Margarita Ranch, California, oak mistletoe (Phoradendron villosum) parasitizes valley oak and blue oak but cannot be found growing on coast live oak despite its abundance and ability to parasitize coast live oak in other areas. It seems as though this species of mistletoe is specializing on certain host oak trees, but the mechanisms of this specialization are unknown. In order to investigate this pattern, we utilized a type of machine learning in GIS called supervised classification as well as a reciprocal transplant study in the field. The three species of oak trees were classified with 87% accuracy using …

Effects Of Compost On Soil Health And Greenhouse Gas Emissions: A Case Study In A Mediterranean Vineyard, Tsz Fai Wong

Master's Theses

Compost is commonly used as an organic amendment in cropping systems such as vineyards, and has been shown to be beneficial to carbon (C) sequestration and soil health. As perennial crops, grapevines have a larger potential for C sequestration than most crops. Yet, there is a lack of understanding regarding the relationship between compost application rate, the magnitude of C sequestration, and its environmental tradeoff in the form of greenhouse gas (GHG) emissions. In the study, we investigated the effects of compost application rate on soil C sequestration, GHG emissions, crop growth, and overall soil health after two annual compost …

Investigating The Mechanism Of The Escherichia Coli Atp-Binding Cassette (Abc) Transporter Metni, Matthew Foronda

Master's Theses

Chemical homeostasis is a baseline requirement for any cell to survive. ATP-binding cassette (ABC) transporters play a vital role in homeostasis by importing nutrients and exporting toxins against their concentration gradients by utilizing the energy of ATP hydrolysis. Malfunctioning ABC transporters cause a variety of health problems, including cystic fibrosis, Stargardt’s disease (vision loss), and the development of drug-resistant tumors. An important step in solving these medical issues is to first understand the structure and mechanism of ABC transporters. Various studies have made great strides in depicting the structure and details of different ABC transporters and their mechanisms, however, many …

Gender Differences In Risk, Social, And Competitive Preference. Experimental Evidence From Uzbekistan., Firuzjon Khayrulloev

Master's Theses

Most of the previous literature suggests that women are less competitive than men. However, I we hypothesize that women are as competitive as man when the incentive for winning equally matter for both genders. The option to share some of their winnings with other competitors may afford females benefit from rewards without suffering some of its potential costs. In this paper we conducted an experiment on 212 subjects and the results support our hypothesis. The gap in competitiveness between males and females vanishes when we allowed winners an opportunity to share some of their winnings. Overall, our work demonstrates that …

Exploring The Mechanism Of The Electrostatic Denaturation Of Double-Stranded Dna, Gayatri Raghu

Master's Theses

Electrostatic melting is an electrochemical tool that can be used to analyze the stability of DNA, allowing for the detection of various mutations in double-stranded DNA (dsDNA). Here, we explore the influence of electrostatic double layer formation on the unzipping of dsDNA to better comprehend the mechanism of this process. Previous studies by our lab show that the melting curve produced can distinguish between fully complementary 34-bp strands and a version of the same sequence in which one base pair has been replaced with a mismatch pair or detect and characterize the crosslinking of the dsDNA by anticancer drug cisplatin. …

Temperature Effects On Prevalence Of Sexually Transmitted Infections Among At-Risk Female Sex Workers In India, Rajshri Suresh

Master's Theses

Vulnerability to climate change varies depending on the baseline climate, sensitivity to given exposure, and the presence of social, political, cultural, and institutional inequalities that influence access to essential resources of livelihood, particularly among informal labor market participants. Within the risky informal labor market, the transient nature of sex work implies that sex workers suffer disproportional losses in health, income, protection, and other aspects of general well-being as a result of the effects of climate anomalies. In this paper, I investigate the effect of temperature on the prevalence of sexually transmitted infections in a high-risk population of female sex workers …

Lgbtq Forced Migrants' Labor Market Integration In Mexico City: Perspectives From Mexico's Government Agencies, International Organizations, And Mexican Civil Society, Rolando Diaz

Master's Theses

Mexico holds a unique position as a country of immigration, emigration, refuge, transit, and return migration. In recent decades, researchers have built awareness on the country’s received migrants’ diverse characteristics by posing questions and tackling the challenges that certain migrants face. Lesbian, Gay, Bisexual, Transgender, and Queer (LGBTQ) forced migrants have become increasingly visible since the exodus of asylum-seekers from Central America. Many of these LGBTQ migrants flee state and non-state actors that present life-threatening conditions for the LGBTQ community. Though Mexico as a whole is going through its own evolution on LGBTQ and migrants’ rights, its capital city has …

Testimonios Of The Multiracial Latinx/A/O Student Experience, Victoria Juarez

Master's Theses

This thesis examines the experiences and identity development of multiracial Latinx/a/o students who attend Jesuit higher education institutions by way of testimonios. The research project sought to examine the following research questions: How do multicultural Latinx/a/o students perceive their identities in relation to their campus environment? What are the unique ways that multicultural Latinx/a/o students perceive themselves in the larger framework of society? How do multiracial Latinx/a/o students negotiate racial/ethnic/cultural boundaries? This research project found that multiracial Latinx/a/o understand their positionality as “othered” within a monoracial framework and that they face various barriers to full inclusion in either of their …

Alliance Building In The Food Sovereignty Movement: Perspectives From Activists Advocating For Farmworker Justice And Agrarian Justice, Sarah Ruszkowski

Master's Theses

The food sovereignty movement has come to encompass a wide-range of constituent groups, all with unique perspectives and interests. While some of these groups’ goals align naturally, others present priorities differently, namely organizations that advocate for farmworker justice and those that advocate for agrarian justice. Because of the power imbalance embedded in this relationship as well as the racist, patriarchal, and neoliberal nature of agrarian capitalism, it can be challenging to navigate an equitable path forward. In this thesis, I examine whether and how food sovereignty as a broader umbrella movement is generative towards building ties between advocates for farmworker …

Assessing Convolutional Neural Network Animal Classification Models For Practical Applications In Wildlife Conservation, Julia Larson

Master's Theses

Convolution neural network models (CNNs) can successfully identify animal species in camera-trap images in simplified testing environments. CNN performance in more complex, realistic environments is understudied. Here the Wellington Camera Traps dataset was used to simulate a wildlife conservation project to detect invasive species at low population levels using camera-trap images and CNN models. Ten CNNs were developed and analyzed with seven testing datasets, simulating 13 possible project scenarios. Model performance was measured using standard computer science metrics, top-1, and top-5 accuracy, and two novel performance metrics developed for this research to directly reflect wildlife conservation goals, false alarm rate, …

The Language Of The Creative Person: Validating The Use Of Linguistic Analysis To Assess Creativity, Sana Tariq Ahmed

Master's Theses

Creativity is most commonly assessed through methods such as questionnaires and specific tasks, the validity of which can be weakened by scorer or experimenter error, subjective and response biases, and self-knowledge constraints. Linguistic analysis provides researchers with an automatic, objective method of assessing creativity, free from human error and bias. This study used 419 creativity text samples from a wide range of creative individuals (Big-C, Pro-C, and Small-c) to investigate whether linguistic analysis can, in fact, distinguish between creativity levels and creativity domains using creativity dictionaries and personality dimension language patterns in the Linguistic Inquiry and Word Count (LIWC) text …

Geographic And Ontogenetic Variation In The Trophic Ecology Of Lingcod (Ophiodon Elongatus) Along The U.S. West Coast, Bonnie Brown

Master's Theses

Dietary studies of fishes provide an understanding of predator-prey interactions and may be used to inform resource managers about food web dynamics. Along the West Coast of North America, Lingcod (Ophiodon elongatus) are top marine predators in rocky-reef habitats and support an economically important fishery. In this study, gut content and stable isotope analyses were used to evaluate differences in the diets of Lingcod collected in U.S. waters from Alaska to Southern California during 2016 and 2017. Overall, Lingcod consumed a wide variety of prey and exhibited both generalist and opportunist feeding strategies. Significant variability in Lingcod diets was driven …

Physics-Based Modeling Of Phase-Change Memory Devices And Materials, Johan Saltin

Master's Theses

Artificial intelligence (AI) has become a key enabler in many applications but requires fast and energy-efficient computation. IBM is exploring an “Analog AI" acceleration approach using phase change memories (PCM). As such, there is a need to accurately model the physics inside each PCM cell, including the interplay between thermal and electrical dynamics, and the impact of PCM polycrystal grains and grain boundaries in materials such as Ge2Sb2Te5. The thesis uses an existing thermo electrodynamic Technology Computer-Aided Design (TCAD), which was created at IBM, to simulate the intermediate resistance states critical to the “Analog AI" application. The thesis discusses the …

Testing The Climatic Variability Hypothesis With Coastal And Inland Populations Of Mimulus Guttatus And Implications For These Populations Under Climate Change, Alec Chiono

Master's Theses

How climate shapes the niche of a species is a core interest in evolution and ecology. Research on the evolution of climatic niches can inform us on the historical relationship between organisms and their climate, and, in an era of great environmental change, what that relationship may look like in the future. In this study, I tested an essential idea in the history of climate niche research, the Climatic Variability Hypothesis, by comparing the thermal niche breadth of coastal and inland populations of Mimulus guttatus. Using thermal performance results from this experiment, I also forecasted how the suitability of …

The Role Of Med31 And Med12 In Directing Adipogenesis Of Human Adult-Derived Mesenchymal Stem Cells, Joseph Straub

Master's Theses

Selective gene expression is crucial in maintaining the self-renewing and multipotent properties of stem cells. Mediator is a large, evolutionarily conserved, multisubunit protein complex that modulates gene expression by relaying signals from cell type-specific transcription factors to RNA polymerase II. In humans, this complex consists of 30 subunits arranged in four modules: head, middle, tail, and kinase. In our introduction, we show the state of the field of Mediator study with a focus on the critical kinase module. In the following chapters, we used siRNA knockdowns to investigate the roles of the highly-conserved core subunit MED31 and the kinase module …

No More Shade: Deforestation And Rural-Urban Migration In Nigeria, Kambre Sims

Master's Theses

Some of the most well-documented motivating factors of migration in Nigeria include education, employment opportunities, and cultural conflicts. However, as the deforestation crisis has not improved and Nigeria has maintained its spot as the country with the most deforestation on Earth, access to critical forest resources may be in danger. In light of this crisis, this paper attempts to determine if deforestation has become a new motivating factor for migration as those in rural communities seek other avenues of obtaining those vital resources. Subsequently, Nigeria is also experiencing a housing crisis within its rapidly growing urban centers; obtaining and keeping …

Structural Re-Orientation Of Magmatic Fabrics And Layering In The Lower Oceanic Crust: Hole Gt1, Wadi Tayin Massif, Samail Ophiolite, Justin Guillot

Master's Theses

This thesis aims to re-orient borehole images of layered gabbros sampled beneath Hole GT1 in the Wadi Tayin massif of the Oman ophiolite by the Oman Drilling Project to better constrain models of crustal accretion. The gabbro glacier model proposes that crystallized basalt flows down and away from the crystallization site to form the lower crust while the sheeted sill model proposes that basaltic melt crystallizes at multiple levels in the crust through sills. Hole GT1 provides an unprecedented 400 m, 100% recovery, look at the lower oceanic crust. Cores lose their geographic orientation when drilled, requiring use of the …

Women In The Outdoors: Navigating Fear And Creating Space For Spiritual Inspiration 2021, Morgan Costello

Master's Theses

The purpose of this study was to examine the relationship between fear and spiritual inspiration for women in the outdoors. Specifically, this study looked at participants from SUNY Cortland’s Outdoor Education Practicum, a core course in the Recreation, Parks, and Leisure Studies Department that culminates with a two-week outdoor experience, with the goals of teaching outdoor skills and building community. This was a mixed-method study, with quantitative data collected according to pre(mid)post design and qualitative data coming from journal entries over a 5-day period. Testing was conducted using the Outdoor Situational Fear Inventory to measure fear, and the Nature Relatedness …

Notch And Mediator Work Together To Direct Hasc Self-Renewal, Jaylen Mumphrey

Master's Theses

Stem cells are unique in that they possess totipotent, pluripotent, or multipotent differentiation capabilities and can also self-renew. Stem cells are in either a state of selfrenewal or differentiation, but never both. If we are able to gain a full understanding of the underlying mechanisms that allow stem cells to remain self-renewing and multipotent, we will better be able to control the fate of cells, ultimately allowing stem cells to be used to their full capabilities in regenerative medicine. My research focuses on MED12 and its effects on Notch signaling. Here we describe the expression profile and activity of MED12, …

The Role Of Med12 In Adipogenesis Of Human Adipose Stem Cells, Onyekachi Chinelo Idigo

Master's Theses

The interest in adipogenesis stems from the high rate of obesity in the world and the motivation to better understand the process of cell fate in relation to human diseases. Mutations in MED12 lead to developmental disorders and certain malignancies. To date, specific roles of Mediator and MED12 in cell state regulation are unclear, nevertheless, they are critical for understanding stem cell regulation and enhancement of their clinical applications. This study investigates the role of MED12 in relation to the Mediator complex kinase domain to better understand transcriptional control of adipogenesis in hASCs. In this study, MED12 expression was diminished …

Loblolly Pine (Pinus Taeda) Leaf-Level Physiology And The Influence Of Genotype, Drought, And Thinning, Norman Jesse Cone Iv

Master's Theses

The Southeastern U.S. is known as the “Wood Basket” for producing the vast majority of U.S. timber, but projected increases in the frequency of severe drought events could threaten timber plantations. Loblolly pine (Pinus taeda) is the principle timber species of the southeast and is distributed across the Atlantic Coastal Plains and west into Texas. Western Gulf states (LA, TX, AR, and OK) lie at the edge of the range for loblolly pine and are particularly vulnerable to any changes in precipitation or temperature. Current research suggests two main methods to increase plantation drought resistance: plant drought resistant seedlings or …

The Role Of Med12 In Adipogenesis, Caroline Helen Rinderle

Master's Theses

In order for any function to occur within a cell, transcription factors must be able to interact with genes. When this occurs, genes are expressed, and ultimately, proteins are translated and perform the specific function that needs to be done within the cell. In order for this to occur, genes must interact with transcription machinery. The Mediator complex recruits transcription factors to genes in order to promote cell-type specific gene expression. The Mediator complex is a multi-protein complex consisting of four modules: head, middle, tail, and kinase. The kinase module is known to dissociate from the rest of the complex …

Remaking Divinity In Aldous Huxley’S Brave New World 2021, Sebastian Vignone

Master's Theses

Humanity is an experience. Shaped through both individual and collective encounters, we understand the self and the world around us as an amalgamation of interactions over the course of our lives. Arguably, one of the most common experiential archetypes is religion, and more specifically the relationship one has with a divine being as it has been framed by a religious institution. While the United States does not have an official religion, there is a host of people who refer to the U.S. as a “Christian nation,” and it is therefore irresponsible to elide the panoply of inequities that run through …

Evaluating Marsh Restoration Success Using Structural And Trophic Metrics On Deer Island, Ms, Emelia Marshall

Master's Theses

Coastal marshes in the northern Gulf of Mexico provide essential habitat for various consumer species, however, land loss has severely degraded marsh habitat in this region. Few studies have examined restored black needlerush (Juncus roemerianus) marshes, such as those found in Mississippi (MS), and how they affect faunal inhabitants.

Restoration of Juncus-dominated marshes on Deer Island, MS sought to reestablish ecological functions with the intention of supporting natural consumer assemblages. To test this, quadrat and minnow trap sampling were used to compare invertebrate and nekton abundance, species richness, and diversity of two restored marshes (5+ yrs and …

An Evaluation Of Activity In A Colonial Maya Cemetery Using Femoral Cross-Sectional Analysis, Casey Lejeune

Master's Theses

Cortical bone formation in the population of Tipu, a colonial visita site in Belize, was examined here to reveal factors of their activity and address the possibility of a status-based burial plan. To answer this question, this research examined the endosteal surface of the midshaft femur using digital imaging methods. The femora from 70 individuals were photographed and examined using the BoneJ plugin in ImageJ software. The cortical bone area was compared to additional variables, including sex, age, stature, pilastric index, and burial location. It was hypothesized that sex, age, and stature would correlate with cortical bone area similarly across …

Effects Of Bacterial Metabolites In Conditioned Media On Colon Cancer Proliferation, Hunter Panier

Master's Theses

Cancer is the second leading cause of death in the United States with colorectal cancer (CRC) being the third most common type. Available treatments include a combination of surgery and chemotherapy but have debilitating side effects. These also have limited effectiveness in some cases, creating the need for additional treatment options, or supplementary treatments to increase their effectiveness. This is leading scientists to consider the microbiome to fix this shortcoming. Current research is focusing on the microbiome and its interactions with certain diseases, which could lead to pro- or prebiotic therapies. This work aims to establish specific bacterial species can …

Correlation Between Tooth Root Translucency, Crystallinity, And Dna Preservation In Teeth For Unidentified Human Remains (Uhr) Investigations, Paul Yount

Master's Theses

Endogenous genetic material protected by the rigid, mineralized hard tissues of bones and teeth is often targeted for forensic DNA testing in missing persons and unidentified human remains (UHR) investigations. Although standard approaches have narrowed sample selection to a few optimal skeletal elements (i.e., weight-bearing long bones, teeth), subsampling and decisions beyond this can be challenging due to the non-uniform, heterogeneous pattern of postmortem diagenesis. One particular component of skeletal microstructure — the inorganic mineral matrix [hydroxyapatite (HAp), Ca10(PO4)6(OH)2] — is purported to play a major role in DNA preservation. The potential correlation between molecular changes to skeletal microstructure and …