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Hydrogen Sulfide Gas Detection Via Multivariate Optical Computing, Bin Dai, Christopher Michael Jones, Megan Pearl, Mickey Pelletier, Michael L. Myrick Jul 2018

Hydrogen Sulfide Gas Detection Via Multivariate Optical Computing, Bin Dai, Christopher Michael Jones, Megan Pearl, Mickey Pelletier, Michael L. Myrick

Faculty Publications

Hydrogen-sulfide gas is a toxic, colorless gas with a pungent odor that occurs naturally as a decomposition by-product. It is critical to monitor the concentration of hydrogen sulfide. Multivariate optical computing (MOC) is a method that can monitor analytes while minimizing responses to interferences. MOC is a technique by which an analogue calculation is performed entirely in the optical domain, which simplifies instrument design, prevents the drift of a calibration, and increases the strength and durability of spectroscopic instrumentation against physical perturbation when used for chemical detection and identification. This paper discusses the detection of hydrogen-sulfide gas in the ultraviolet …

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A Test Of The Psychometric Characteristics Of The Bis-Brief Among Three Groups Of Youth, Charles W. Mathias, Matthew S. Stanford, Yuanyuan Lang, Martin Goros, Nora E. Charles, Arielle H. Sheftall, Jillian Mullen, Nathalie Hill-Kapturczak, Ashley Acheson, Rene L. Olvera, Donald M. Dougherty Jul 2018

A Test Of The Psychometric Characteristics Of The Bis-Brief Among Three Groups Of Youth, Charles W. Mathias, Matthew S. Stanford, Yuanyuan Lang, Martin Goros, Nora E. Charles, Arielle H. Sheftall, Jillian Mullen, Nathalie Hill-Kapturczak, Ashley Acheson, Rene L. Olvera, Donald M. Dougherty

Faculty Publications

The current study empirically investigates the relationships between the Dark Triad personality traits and cyber-aggression among adolescents (14–18 year old). The sample consisted of 324 participants aged 14–18 (M = 16.05, SD = 1.31). Participants completed the Short Dark Triad (SD3) as a measure of the Dark Triad personality traits, the Facebook Intensity Scale and a scale to measure cyber-aggression. Structural equation modelling was applied to investigate the relationships. Results show that only Facebook intensity and psychopathy significantly predict cyber-aggression, when controlling for age and gender. Findings are discussed regarding the potential importance to further study Dark Triad traits, and …

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Combined Effects Of Deepwater Horizon Crude Oil And Environmental Stressors On Fundulus Grandis Embryos, Maria L. Rodgers, Elizabeth R. Jones, Christopher Klinkhamer, Cecon T. Mahapatra, Jennifer Serafin, Thijs Bosker, Chris Perkins, Robert J. Griffitt, Sylvain De Guise, Maria S. Sepúlveda Jul 2018

Combined Effects Of Deepwater Horizon Crude Oil And Environmental Stressors On Fundulus Grandis Embryos, Maria L. Rodgers, Elizabeth R. Jones, Christopher Klinkhamer, Cecon T. Mahapatra, Jennifer Serafin, Thijs Bosker, Chris Perkins, Robert J. Griffitt, Sylvain De Guise, Maria S. Sepúlveda

Faculty Publications

In the present study, we examined how sensitivity to oil changes in combination with environmental stressors in Fundulus grandis embryos. We exposed embryos (fertilization) to a range of high‐energy water accommodated fraction (HEWAF) concentrations (0–50 parts per billion [ppb] total polycyclic aromatic hydrocarbons [PAHs]) made from Macondo crude oil in conjunction with various environmental conditions (temperature: 20 and 30 °C; salinity: 3, 7, and 30 practical salinity units [PSU]; and dissolved oxygen: 2 and 6 mg/L). Endpoints included mortality, hatching rates, and expression of cytochrome p450 1a and 1c (cyp1a, cyp1c) in hatched larvae. There was 100% …

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Cyber War And Deterrence: Applying A General Theoretical Framework, Isaac Nacita, Mark Reith Jul 2018

Cyber War And Deterrence: Applying A General Theoretical Framework, Isaac Nacita, Mark Reith

Faculty Publications

There is a saying that politicians and generals are always fighting the last war, which is emphasized when the weapons and characteristics of warfare are changing rapidly. However, if this is true, it is often not due to an inability to learn lessons from previous conflicts, but to “overlearn” or overcompensate for the failures and experiences of the past. In reality, this is not a learning problem but one of forming poor implications from historical events, which leads to poor applications of doctrine the next time around. The DOD now acknowledges that warfare has extended into cyberspace, and it is …

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High Circulatory Leptin Mediated Nox-2-Peroxynitrite-Mir21 Axis Activate Mesangial Cells And Promotes Renal Inflammatory Pathology In Nonalcoholic Fatty Liver Disease, Firas Alhasson, Ratanesh K. Seth, Sutapa Sarkar, Diana A. Kimono, Muayad S. Albadrani, Diptadip Dattaroy, Varun Chandrashekaran, Geoffry Scott, Samir Raychoudhury, Mitzi Nagarkatti, Prakash Nagarkatti, Anna Mae Diehl, Saurabh Chatterjee Jul 2018

High Circulatory Leptin Mediated Nox-2-Peroxynitrite-Mir21 Axis Activate Mesangial Cells And Promotes Renal Inflammatory Pathology In Nonalcoholic Fatty Liver Disease, Firas Alhasson, Ratanesh K. Seth, Sutapa Sarkar, Diana A. Kimono, Muayad S. Albadrani, Diptadip Dattaroy, Varun Chandrashekaran, Geoffry Scott, Samir Raychoudhury, Mitzi Nagarkatti, Prakash Nagarkatti, Anna Mae Diehl, Saurabh Chatterjee

Faculty Publications

High circulatory insulin and leptin followed by underlying inflammation are often ascribed to the ectopic manifestations in non-alcoholic fatty liver disease (NAFLD) but the exact molecular pathways remain unclear. We have shown previously that CYP2E1-mediated oxidative stress and circulating leptin in NAFLD is associated with renal disease severity. Extending the studies, we hypothesized that high circulatory leptin in NAFLD causes renal mesangial cell activation and tubular inflammation via a NOX2 dependent pathway that upregulates proinflammatory miR21. High-fat diet (60% kcal) was used to induce fatty liver phenotype with parallel insulin and leptin resistance. The kidneys were probed for mesangial cell …

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Gekko Optimization Suite, Logan Beal, Daniel Hill, Ronald Abraham Martin, John Hedengren Jul 2018

Gekko Optimization Suite, Logan Beal, Daniel Hill, Ronald Abraham Martin, John Hedengren

Faculty Publications

This paper introduces GEKKO as an optimization suite for Python. GEKKO specializes in dynamic optimization problems for mixed-integer, nonlinear, and differential algebraic equations (DAE) problems. By blending the approaches of typical algebraic modeling languages (AML) and optimal control packages, GEKKO greatly facilitates the development and application of tools such as nonlinear model predicative control (NMPC), real-time optimization (RTO), moving horizon estimation (MHE), and dynamic simulation. GEKKO is an object-oriented Python library that offers model construction, analysis tools, and visualization of simulation and optimization. In a single package, GEKKO provides model reduction, an object-oriented library for data reconciliation/model predictive control, and …

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Detection And Verification Of Mammalian Mirtrons By Northern Blotting, Mohammad Farid Zia, Alex S. Flynt Jun 2018

Detection And Verification Of Mammalian Mirtrons By Northern Blotting, Mohammad Farid Zia, Alex S. Flynt

Faculty Publications

microRNAs (miRNAs) have vital roles in regulating gene expression—contributing to major diseases like cancer and heart disease. Over the last decade, thousands of miRNAs have been discovered through high throughput sequencing-based annotation. Different classes have been described, as well as a great dynamic range of expression levels. While sequencing approaches provide insight into biogenesis and allow confident identification, there is a need for additional methods for validation and characterization. Northern blotting was one of the first techniques used for studying miRNAs, and remains one of the most valuable as it avoids enzymatic manipulation of miRNA transcripts. Blotting can also provide …

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The Impact Of The Deepwater Horizon Blowout On Historic Shipwreck-Associated Sediment Microbiomes In The Northern Gulf Of Mexico, Leila J. Hamdan, Jennifer Salerno, Allen H. Reed, Samantha B. Joye, Melanie Damour Jun 2018

The Impact Of The Deepwater Horizon Blowout On Historic Shipwreck-Associated Sediment Microbiomes In The Northern Gulf Of Mexico, Leila J. Hamdan, Jennifer Salerno, Allen H. Reed, Samantha B. Joye, Melanie Damour

Faculty Publications

More than 2,000 historic shipwrecks spanning 500 years of history, rest on the Gulf of Mexico seafloor. Shipwrecks serve as artificial reefs and hotspots of biodiversity by providing hard substrate, something rare in deep ocean regions. The Deepwater Horizon (DWH) spill discharged crude oil into the deep Gulf. Because of physical, biological, and chemical interactions, DWH oil was deposited on the seafloor, where historic shipwrecks are present. This study examined sediment microbiomes at seven historic shipwrecks. Steel-hulled, World War II-era shipwrecks and wooden-hulled, 19th century shipwrecks within and outside of the surface oiled area and subsurface plume were examined. Analysis …

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Purifying Selection In The Toll-Like Receptors Of Song Sparrows Melospiza Melodia, Martha J. Nelson-Flower, Ryan R. Germain, Elizabeth A. Macdougall-Shackleton, Sabrina S. Taylor, Peter Arcese Jun 2018

Purifying Selection In The Toll-Like Receptors Of Song Sparrows Melospiza Melodia, Martha J. Nelson-Flower, Ryan R. Germain, Elizabeth A. Macdougall-Shackleton, Sabrina S. Taylor, Peter Arcese

Faculty Publications

Variation in immune gene sequences is known to influence resistance to infectious diseases and parasites, and hence survival and mate choice, across animal taxa. Toll-like receptors (TLRs) comprise one essential gene family in the vertebrate innate immune system and recognize evolutionarily conserved structures from all major microorganism classes. However, the causes and consequences of TLR variation in passerine birds remain largely unexplored. We examined 7 TLR genes in song sparrows (Melospiza melodia), a species that is studied across North America. We then examined sequences from 4 unduplicated TLRs (TLR1LB, TLR3, TLR4, and TLR15) from birds in 2 parts of the …

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Spatial Assessment Of Water Quality With Urbanization In 2007-2015, Shanghai, China, Huixuan Li, Cuizhen Wang, Xiao Huang, Andrew Hug Jun 2018

Spatial Assessment Of Water Quality With Urbanization In 2007-2015, Shanghai, China, Huixuan Li, Cuizhen Wang, Xiao Huang, Andrew Hug

Faculty Publications

Shanghai, as one of the megacities and economic centers of China, is facing critical water quality challenges. This study analyzed the impact of urbanization on the water quality in Shanghai, from 2007 to 2015, using remote sensing (RS) and geographic information system (GIS) techniques. Five measurements of water quality were employed: total discharged wastewater volume, general water quality levels, dissolved oxygen (DO), permanganate, and ammonia nitrogen. The impacts of urban land-use changes on water quality were examined. An urban index was extracted from satellite image classification and was used to quantify the anthropogenic activities. In the watershed level, unit watersheds …

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Identification Of Genomic Regions Controlling Leaf Scald Resistance In Sugarcane Using A Bi-Parental Mapping Population And Selective Genotyping By Sequencing, Andres F. Gutierrez, Jeffrey W. Hoy, Collins A. Kimbeng, Niranjan Baisakh Jun 2018

Identification Of Genomic Regions Controlling Leaf Scald Resistance In Sugarcane Using A Bi-Parental Mapping Population And Selective Genotyping By Sequencing, Andres F. Gutierrez, Jeffrey W. Hoy, Collins A. Kimbeng, Niranjan Baisakh

Faculty Publications

Leaf scald, caused by Xanthomonas albilineans, is a major sugarcane disease worldwide. The disease is managed primarily with resistant cultivars obtained through classical breeding. However, erratic symptom expression hinders the reliability and reproducibility of selection for resistance. The development and use of molecular markers associated with incompatible/compatible reactions could overcome this limitation. The aim of the present work was to find leaf scald resistance-associated molecular markers in sugarcane to facilitate marker-assisted breeding. A genetic linkage map was constructed by selective genotyping of 89 pseudo F2 progenies of a cross between LCP 85-384 (resistant) and L 99-226 (susceptible) using 1,948 single …

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A Model Of Motor And Sensory Axon Activation In The Median Nerve Using Surface Electrical Stimulation, Jessica L. Gaines, Kathleen E. Finn, Julia P. Slopsema, Lane A. Heyboer, Katharine H. Polasek Jun 2018

A Model Of Motor And Sensory Axon Activation In The Median Nerve Using Surface Electrical Stimulation, Jessica L. Gaines, Kathleen E. Finn, Julia P. Slopsema, Lane A. Heyboer, Katharine H. Polasek

Faculty Publications

Surface electrical stimulation has the potential to be a powerful and non-invasive treatment for a variety of medical conditions but currently it is difficult to obtain consistent evoked responses. A viable clinical system must be able to adapt to variations in individuals to produce repeatable results. To more fully study the effect of these variations without performing exhaustive testing on human subjects, a system of computer models was created to predict motor and sensory axon activation in the median nerve due to surface electrical stimulation at the elbow. An anatomically-based finite element model of the arm was built to accurately …

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Msab And Cody Interact To Regulate Staphylococcus Aureus Capsule In A Nutrient-Dependent Manner, Justin Batte, Gyan S. Sahukhal, Mohamed O. Elasri Jun 2018

Msab And Cody Interact To Regulate Staphylococcus Aureus Capsule In A Nutrient-Dependent Manner, Justin Batte, Gyan S. Sahukhal, Mohamed O. Elasri

Faculty Publications

Staphylococcus aureus has a complex regulatory network for controlling the production of capsule polysaccharide. In S. aureus, capsule production is controlled by several regulators in response to various environmental stimuli. Previously, we described MsaB as a new regulator that specifically binds to the cap promoter in a growth-phase or nutrient-dependent manner. In addition to MsaB, several other regulators have also been shown to bind the same region. In this study, we examined the interactions between MsaB and other nutrient-sensing regulators (CodY and CcpE) with respect to binding to the cap promoter in a nutrient-dependent manner. We observed that msaABCR …

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Phosphorus Fluxes From Three Coastalwatersheds Under Varied Agriculture Intensities To The Northern Gulf Of Mexico, Songjie He, Y. Jun Xu Jun 2018

Phosphorus Fluxes From Three Coastalwatersheds Under Varied Agriculture Intensities To The Northern Gulf Of Mexico, Songjie He, Y. Jun Xu

Faculty Publications

This study aims to evaluate recent total phosphorus (TP) and dissolved inorganic phosphorus (DIP) transport from three coastal rivers-the Calcasieu, Mermentau, and Vermilion Rivers-that drain watersheds with varied agriculture intensities (21%, 67%, and 61%, respectively) into the northern Gulf of Mexico, one of the world's largest summer hypoxic zones. The study also examined the spatial trends of TP and DIP from freshwater to saltwater along an 88-km estuarine reach with salinity increasing from 0.02 to 29.50. The results showed that from 1990-2009 to 2010-2017, the TP fluxes for one of the agriculture-intensive rivers increased while no significant change was found …

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Agency In Action: Exploring User Responses And Rhetorical Choices In Interactive Data Displays, Jacob D. Rawlins, Gregory D. Wilson, Kate Crane Jun 2018

Agency In Action: Exploring User Responses And Rhetorical Choices In Interactive Data Displays, Jacob D. Rawlins, Gregory D. Wilson, Kate Crane

Faculty Publications

n 2014, Rawlins and Wilson proposed a typology of agential interactions between users and designers of interactive data displays. This article tests that typology by studying 20 users working with three different types of interactive data displays and answering questions, which were coded by verb and actor and analyzed for themes. The authors show that rhetorical agency is marked by thoughts, actions, and language. Affordances by the designer open a shared rhetorical space where user and designer are coparticipants. As interactivity increases, participants see themselves as rhetorical agents in a community of rhetorical agents rather than as conduits of information.

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Tetrafluorobenzo-Fused Bodipy: A Platform For Regioselective Synthesis Of Bodipy Dye Derivatives, Andrea Savoldelli, Qianli Meng, Roberto Paolesse, Frank R. Fronczek, Kevin M. Smith, M. Graça H. Vicente Jun 2018

Tetrafluorobenzo-Fused Bodipy: A Platform For Regioselective Synthesis Of Bodipy Dye Derivatives, Andrea Savoldelli, Qianli Meng, Roberto Paolesse, Frank R. Fronczek, Kevin M. Smith, M. Graça H. Vicente

Faculty Publications

© 2018 American Chemical Society. A novel route for the synthesis of unsymmetrical benzo-fused BODIPYs is reported using 4,5,6,7-tetrafluoroisoindole as a precursor. The reactivity of the 3,5-dibromo tetrafluorobenzo-fused BODIPY was investigated under nucleophilic substitution and Pd(0)-catalyzed cross-coupling reaction conditions. In addition to the 3,5-bromines, one α-fluoro group on the benzo-fused ring can also be functionalized, and an unusual homocoupling with formation of a bisBODIPY was observed. This new class of fluorinated BODIPYs could find various applications in medicine and materials.

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Circadiomics: Circadian Omic Web Portal, Nicholas Ceglia, Yu Liu, Siwei Chen, Forest Agostinelli, Kristin Eckel-Mahan, Paolo Sassone-Corsi, Pierre Baldi Jun 2018

Circadiomics: Circadian Omic Web Portal, Nicholas Ceglia, Yu Liu, Siwei Chen, Forest Agostinelli, Kristin Eckel-Mahan, Paolo Sassone-Corsi, Pierre Baldi

Faculty Publications

Circadian rhythms play a fundamental role at all levels of biological organization. Understanding the mechanisms and implications of circadian oscillations continues to be the focus of intense research. However, there has been no comprehensive and integrated way for accessing and mining all circadian omic datasets. The latest release of CircadiOmics (http://circadiomics.ics.uci.edu) fills this gap for providing the most comprehensive web server for studying circadian data. The newly updated version contains high-throughput 227 omic datasets corresponding to over 74 million measurements sampled over 24 h cycles. Users can visualize and compare oscillatory trajectories across species, tissues and conditions. Periodicity statistics (e.g. …

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Seasonal Patterns In Phytoplankton Biomass Across The Northern And Deep Gulf Of Mexico: A Numerical Model Study, Fabian A. Gomez, Sang-Ki Lee, Yanyun Liu, Frank J. Hernandez Jr., Frank E. Muller-Karger, John T. Lamkin Jun 2018

Seasonal Patterns In Phytoplankton Biomass Across The Northern And Deep Gulf Of Mexico: A Numerical Model Study, Fabian A. Gomez, Sang-Ki Lee, Yanyun Liu, Frank J. Hernandez Jr., Frank E. Muller-Karger, John T. Lamkin

Faculty Publications

Biogeochemical models that simulate realistic lower-trophic-level dynamics, including the representation of main phytoplankton and zooplankton functional groups, are valuable tools for improving our understanding of natural and anthropogenic disturbances in marine ecosystems. Previous three-dimensional biogeochemical modeling studies in the northern and deep Gulf of Mexico (GoM) have used only one phytoplankton and one zooplankton type. To advance our modeling capability of the GoM ecosystem and to investigate the dominant spatial and seasonal patterns of phytoplankton biomass, we configured a 13-component biogeochemical model that explicitly represents nanophytoplankton, diatoms, micro-, and mesozooplankton. Our model outputs compare reasonably well with observed patterns in …

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Contribution Of Benthic Processes To The Growth Of Ooids On A Low-Energy Shore In Cat Island, The Bahamas, Giulio Mariotti, Sara B. Pruss, Roger E. Summons, Sharon A. Newman, Tanja Bosak Jun 2018

Contribution Of Benthic Processes To The Growth Of Ooids On A Low-Energy Shore In Cat Island, The Bahamas, Giulio Mariotti, Sara B. Pruss, Roger E. Summons, Sharon A. Newman, Tanja Bosak

Faculty Publications

Ooids are typically found in frequently reworked coastal sediments, and are thought to accrete by inorganic chemical precipitation around moving grains. The high organic content and the presence of biosignatures, however, suggest that ooids interact with benthic microbial communities. Here, we investigate the role of benthic processes on ooid growth on a leeward shore of Cat Island, The Bahamas. Polished ooids are present in the surf zone, whereas dull ooids and grapestones are present in microbially colonized sediments seaward of the surf zone. Wave hydrodynamics and sediment transport modeling suggest that microbially colonized sediments are mobilized at monthly time scales. …

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Stability, Persistence And Habitat Associations Of The Pearl Darter Percina Aurora In The Pascagoula River System, Southeastern Usa, Scott R. Clark, William T. Slack, Brian Kreiser, Jacob F. Schaefer, Mark A. Dugo Jun 2018

Stability, Persistence And Habitat Associations Of The Pearl Darter Percina Aurora In The Pascagoula River System, Southeastern Usa, Scott R. Clark, William T. Slack, Brian Kreiser, Jacob F. Schaefer, Mark A. Dugo

Faculty Publications

The southeastern United States represents one of the richest collections of aquatic biodiversity worldwide; however, many of these taxa are under an increasing threat of imperilment, local extirpation, or extinction. The pearl darter Percina aurora is a small-bodied freshwater fish endemic to the Pearl and Pascagoula river systems of Mississippi and Louisiana (USA). The last collected specimen from the Pearl River drainage was taken in 1973, and it now appears that populations in this system are likely extirpated. This reduced the historical range of this species by approximately 50%, ultimately resulting in federal protection under the US Endangered Species Act …

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Honey Bee Survival And Pathogen Prevalence: From The Perspective Of Landscape And Exposure To Pesticides, Mohamed Alburaki, Deniz Chen, John A. Skinner, William G. Meikle, David R. Tarpy, John Adamczyk, Scott D. Stewart Jun 2018

Honey Bee Survival And Pathogen Prevalence: From The Perspective Of Landscape And Exposure To Pesticides, Mohamed Alburaki, Deniz Chen, John A. Skinner, William G. Meikle, David R. Tarpy, John Adamczyk, Scott D. Stewart

Faculty Publications

In order to study the in situ effects of the agricultural landscape and exposure to pesticides on honey bee health, sixteen honey bee colonies were placed in four different agricultural landscapes. Those landscapes were three agricultural areas with varying levels of agricultural intensity (AG areas) and one non-agricultural area (NAG area). Colonies were monitored for different pathogen prevalence and pesticide residues over a period of one year. RT-qPCR was used to study the prevalence of seven different honey bee viruses as well as Nosema sp. in colonies located in different agricultural systems with various intensities of soybean, corn, sorghum, and …

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The 1987-1989 Phytoplankton Bloom In Kaneohe Bay, Edward Laws, Satoru Taguchi Jun 2018

The 1987-1989 Phytoplankton Bloom In Kaneohe Bay, Edward Laws, Satoru Taguchi

Faculty Publications

A remarkable bloom of phytoplankton occurred in the southeast sector (SE) of Kaneohe Bay from 1987 through 1989. During the bloom, concentrations of chlorophyll a at the former site of the Kaneohe municipal wastewater treatment plant outfall averaged a little more than 2 mg m-3 for a period of 40 months. The increase of chl a was accompanied by a roughly twofold increase in the percentage of chl a accounted for by cells retained on a 35-micron filter, a drawdown of silicate concentrations from roughly 10 μM to 3-4 μM, an increase of nitrate concentrations from roughly 0.5 to …

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Dynamics Of Phospholipid Membranes Beyond Thermal Undulations, Sudipta Gupta, Judith U. De Mel, Rasangi M. Perera, Piotr Zolnierczuk, Markus Bleuel, Antonio Faraone, Gerald J. Schneider Jun 2018

Dynamics Of Phospholipid Membranes Beyond Thermal Undulations, Sudipta Gupta, Judith U. De Mel, Rasangi M. Perera, Piotr Zolnierczuk, Markus Bleuel, Antonio Faraone, Gerald J. Schneider

Faculty Publications

© 2018 American Chemical Society. We investigated the molecular dynamics of unilamellar liposomes by neutron spin echo spectroscopy. We report the first experimental evidence of a short-range motion at the length scale of the size of the headgroup of a lipid. The associated mean squared displacement shows a t0.26 dependence in the pico- to nanosecond region that indicates another process beyond the predictions of the Zilman-Granek (ZG) model (t0.66) and translational diffusion (t1). A comparison with theory shows that the observed low exponent is associated with a non-Gaussian transient trapping of lipid molecules in a local area and supports the …

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Neighbor And Height Effects On Crown Properties Associated With The Uniform-Stress Principle Of Stem Formation, Thomas J. Dean Jun 2018

Neighbor And Height Effects On Crown Properties Associated With The Uniform-Stress Principle Of Stem Formation, Thomas J. Dean

Faculty Publications

According to the uniform-stress principle of stem formation, the amount of leaf area a tree carries and the leverage it exerts on the stem determine the stem dimensions. Within an even-aged monoculture, the leaf area per tree and the leverage placed on the stem are functions of tree density and tree height. The uniform-stress principle presents the means to translate density effects on crown characteristics into stem dimensions and total standing volume. This approach is truly a top-down method of simulating growth tree and stand growth because leaf area and other crown properties must be determined before stem size and …

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Exposure To Crude Oil And Chemical Dispersant May Impact Marine Microbial Biofilm Composition And Steel Corrosion, Jennifer Salerno, Brenda Little, Jason Lee, Leila J. Hamdan Jun 2018

Exposure To Crude Oil And Chemical Dispersant May Impact Marine Microbial Biofilm Composition And Steel Corrosion, Jennifer Salerno, Brenda Little, Jason Lee, Leila J. Hamdan

Faculty Publications

The release of hydrocarbons and chemical dispersant in marine environments may disrupt benthic ecosystems, including artificial reefs, formed by historic steel shipwrecks, and their associated organisms. Experiments were performed to determine the impacts of crude oil, dispersed crude oil, and dispersant on the community structure and function of microorganisms in seawater (SW) and biofilms formed on carbon steel, a common ship hull construction material. Steel corrosion was also monitored to illustrate how oil spills may impact preservation of steel shipwrecks. Microcosms were filled with seawater (SW) and incubated at 4°C. Carbon steel disks (CSDs) were placed in each tank, and …

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Assessing Pyrite-Derived Sulfate In The Mississippi River With Four Years Of Sulfur And Triple-Oxygen Isotope Data, Bryan A. Killingsworth, Huiming Bao, Issaku E. Kohl Jun 2018

Assessing Pyrite-Derived Sulfate In The Mississippi River With Four Years Of Sulfur And Triple-Oxygen Isotope Data, Bryan A. Killingsworth, Huiming Bao, Issaku E. Kohl

Faculty Publications

© 2018 American Chemical Society. Riverine dissolved sulfate (SO42-) sulfur and oxygen isotope variations reflect their controls such as SO42- reduction and reoxidation, and source mixing. However, unconstrained temporal variability of riverine SO42- isotope compositions due to short sampling durations may lead to mischaracterization of SO42- sources, particularly for the pyrite-derived sulfate load. We measured the sulfur and triple-oxygen isotopes (δ34S, δ18O, and Δ′17O) of Mississippi River SO42- with biweekly sampling between 2009 and 2013 to test isotopic variability and constrain sources. Sulfate δ34S and δ18O ranged from -6.3‰ to -0.2‰ and -3.6‰ to +8.8‰, respectively. Our sampling period captured …

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Assessing Pyrite-Derived Sulfate In The Mississippi River With Four Years Of Sulfur And Triple-Oxygen Isotope Data, Bryan A. Killingsworth, Huiming Bao, Issaku E. Kohl Jun 2018

Assessing Pyrite-Derived Sulfate In The Mississippi River With Four Years Of Sulfur And Triple-Oxygen Isotope Data, Bryan A. Killingsworth, Huiming Bao, Issaku E. Kohl

Faculty Publications

© 2018 American Chemical Society. Riverine dissolved sulfate (SO42-) sulfur and oxygen isotope variations reflect their controls such as SO42- reduction and reoxidation, and source mixing. However, unconstrained temporal variability of riverine SO42- isotope compositions due to short sampling durations may lead to mischaracterization of SO42- sources, particularly for the pyrite-derived sulfate load. We measured the sulfur and triple-oxygen isotopes (δ34S, δ18O, and Δ′17O) of Mississippi River SO42- with biweekly sampling between 2009 and 2013 to test isotopic variability and constrain sources. Sulfate δ34S and δ18O ranged from -6.3‰ to -0.2‰ and -3.6‰ to +8.8‰, respectively. Our sampling period captured …

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Variation In Mating Dynamics Across Five Species Of Leiobunine Harvestmen (Arachnida: Opliones), Kasey D. Fowler-Finn, Sarah L. Boyer, Raine Ikagawa, Timothy Jeffries, Penelope C. Kahn, Eva M. Larsen, Daniel Lee, Morgan Smeester Jun 2018

Variation In Mating Dynamics Across Five Species Of Leiobunine Harvestmen (Arachnida: Opliones), Kasey D. Fowler-Finn, Sarah L. Boyer, Raine Ikagawa, Timothy Jeffries, Penelope C. Kahn, Eva M. Larsen, Daniel Lee, Morgan Smeester

Faculty Publications

No abstract provided.

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Nuptial Gift Chemistry Reveals Convergent Evolution Correlated With Antagonism In Mating Systems Of Harvestmen (Arachnida, Opiliones), Penelope C. Kahn, Dennis D. Cao, Mercedes Burns, Sarah L. Boyer Jun 2018

Nuptial Gift Chemistry Reveals Convergent Evolution Correlated With Antagonism In Mating Systems Of Harvestmen (Arachnida, Opiliones), Penelope C. Kahn, Dennis D. Cao, Mercedes Burns, Sarah L. Boyer

Faculty Publications

Nuptial gifts are material donations given from male to female before or during copulation and are subject to sexual selection in a wide variety of taxa. The harvestman genus Leiobunum has emerged as a model system for understanding the evolution of reproductive morphology and behavior, as transitions between solicitous and antagonistic modes of courtship have occurred multiple times within the lineage and are correlated with convergence in genital morphology. We analyzed the free amino acid content of nuptial gift secretions from five species of Leiobunum using gas chromatography–mass spectrometry. Multivariate analysis of the free amino acid profiles revealed that, rather …

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Species Richness And Phylogenetic Diversity Of Native And Non-Native Species Respond Differently To Area And Environmental Factors, Daijiang Li, William B. Monahan, Benjamin Baiser Jun 2018

Species Richness And Phylogenetic Diversity Of Native And Non-Native Species Respond Differently To Area And Environmental Factors, Daijiang Li, William B. Monahan, Benjamin Baiser

Faculty Publications

© 2018 John Wiley & Sons Ltd Aim: To test whether native and non-native species have similar diversity–area relationships (species–area relationships [SARs] and phylogenetic diversity–area relationships [PDARs]) and whether they respond similarly to environmental variables. Location: United States. Methods: Using lists of native and non-native species as well as environmental variables for >250 US national parks, we compared SARs and PDARs of native and non-native species to test whether they respond similarly to environmental conditions. We then used multiple regressions involving climate, land cover and anthropogenic variables to further explore underlying predictors of diversity for plants and birds in US …

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