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Inferring Life History Characteristics Of The Oceanic Whitetip Shark Carcharhinus Longimanus From Vertebral Bomb Radiocarbon, Michelle S. Passerotti, Allen H. Andrews, Lisa J. Natanson Nov 2020

Inferring Life History Characteristics Of The Oceanic Whitetip Shark Carcharhinus Longimanus From Vertebral Bomb Radiocarbon, Michelle S. Passerotti, Allen H. Andrews, Lisa J. Natanson

Faculty Publications

Oceanic whitetip sharks Carcharhinus longimanus are a cosmopolitan epipelagic species that was once prolific throughout the tropics and subtropics but was recently listed as Critically Endangered by the International Union for the Conservation of Nature and as Threatened under the United States Endangered Species Act. Although historically conspicuous in oceanic fisheries catches, relatively little is known about their habitat use, movement, and life history during migration. Given the paucity of data on migratory patterns and lack of age estimate validation available for this species, we evaluated vertebral growth bands for bomb radiocarbon (14C) patterns to derive additional information on these …

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Fungal Community Structure And Function Shifts With Atmospheric Nitrogen Deposition, Jessica A. M. Moore, Mark A. Anthony, Gregory J. Pec, Lidia K. Trocha, Artur Trzebny, Kevin M. Geyer, Linda T. A. Van Diepen, Serita D. Frey Nov 2020

Fungal Community Structure And Function Shifts With Atmospheric Nitrogen Deposition, Jessica A. M. Moore, Mark A. Anthony, Gregory J. Pec, Lidia K. Trocha, Artur Trzebny, Kevin M. Geyer, Linda T. A. Van Diepen, Serita D. Frey

Faculty Publications

Fungal decomposition of soil organic matter depends on soil nitrogen (N) availability. This ecosystem process is being jeopardized by changes in N inputs that have resulted from a tripling of atmospheric N deposition in the last century. Soil fungi are impacted by atmospheric N deposition due to higher N availability, as soils are acidified, or as micronutrients become increasingly limiting. Fungal communities that persist with chronic N deposition may be enriched with traits that enable them to tolerate environmental stress, which may trade-off with traits enabling organic matter decomposition. We hypothesized that fungal communities would respond to N deposition by …

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Classification Of Planetary Craters Using Outline-Based Morphometrics, Thomas J. Slezak, Jani Radebaugh, Eric H. Christiansen, Mark C. Belk Nov 2020

Classification Of Planetary Craters Using Outline-Based Morphometrics, Thomas J. Slezak, Jani Radebaugh, Eric H. Christiansen, Mark C. Belk

Faculty Publications

The morphologies of craters on planetary surfaces reveal clues about the geologic mechanisms by which they originate and subsequently evolve, as well as the materials and physical variables inherent to the environment in which they formed. We carried out a quantitative multivariate analysis of shape descriptors derived from the outlines of craters formed by volcanic processes on Mars, Io, and Earth and by impact cratering on the Moon using elliptic Fourier analysis (EFA) and the Zahn-Roskies (Z-R) shape function. Canonical variate analysis (CVA) was used to construct a statistical model of differences between the crater groups to classify …

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Self-Reported Health Without Clinically Measurable Benefits Among Adult Users Of Multivitamin And Multimineral Supplements: A Cross-Sectional Study, Manish D. Paranjpe, Alfred C. Chin, Ishan Paranjpe, Nicholas J. Reid, Phan Q. Duy, Jason K. Wang, Ross O'Hagan, Artine Arzani, Arsalan Haghdel, Clarence C. Lim, Vwaire Orhurhu, Ivan Urits, Anh L. Ngo, Benjamin S. Glicksberg, Kathryn T. Hall, Darshan Mehta, Richard S. Cooper, Girish N. Nadkarni Nov 2020

Self-Reported Health Without Clinically Measurable Benefits Among Adult Users Of Multivitamin And Multimineral Supplements: A Cross-Sectional Study, Manish D. Paranjpe, Alfred C. Chin, Ishan Paranjpe, Nicholas J. Reid, Phan Q. Duy, Jason K. Wang, Ross O'Hagan, Artine Arzani, Arsalan Haghdel, Clarence C. Lim, Vwaire Orhurhu, Ivan Urits, Anh L. Ngo, Benjamin S. Glicksberg, Kathryn T. Hall, Darshan Mehta, Richard S. Cooper, Girish N. Nadkarni

Faculty Publications

Objective Multiple clinical trials fail to identify clinically measurable health benefits of daily multivitamin and multimineral (MVM) consumption in the general adult population. Understanding the determinants of widespread use of MVMs may guide efforts to better educate the public about effective nutritional practices. The objective of this study was to compare self-reported and clinically measurable health outcomes among MVM users and non-users in a large, nationally representative adult civilian non-institutionalised population in the USA surveyed on the use of complementary health practices. Design Cross-sectional analysis of the effect of MVM consumption on self-reported overall health and clinically measurable health outcomes. …

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Bioanalytical Assay Development And Validation For The Pharmacokinetic Study Of Gmc1, A Novel Fkbp52 Co-Chaperone Inhibitor For Castration Resistant Prostate Cancer, Oscar Ekpenyong, Candace Cooper, Jing Ma, Naihsuan C. Guy, Ashley N. Payan, Fuqiang Ban, Artem Cherkasov, Marc B. Cox, Dong Liang, Huan Xie Nov 2020

Bioanalytical Assay Development And Validation For The Pharmacokinetic Study Of Gmc1, A Novel Fkbp52 Co-Chaperone Inhibitor For Castration Resistant Prostate Cancer, Oscar Ekpenyong, Candace Cooper, Jing Ma, Naihsuan C. Guy, Ashley N. Payan, Fuqiang Ban, Artem Cherkasov, Marc B. Cox, Dong Liang, Huan Xie

Faculty Publications

Background: GMC1 (2-(1H-benzimidazol-2-ylsulfanyl)-N-[(Z)-(4-methoxyphenyl) methylideneamino] acetamide) effectively inhibits androgen receptor function by binding directly to FKBP52. This is a novel mechanism for the treatment of castration resistant prostate cancer (CRPC). Methods: an LC-MS/MS method was developed and validated to quantify GMC1 in plasma and urine from pharmacokinetics studies in rats. An ultra-high-performance liquid chromatography (UHPLC) system equipped with a Waters XTerra MS C18 column was used for chromatographic separation by gradient elution with 0.1% (v/v) formic acid in water and methanol. A Sciex 4000 QTRAP® mass spectrometer was used for analysis by multiple reaction monitoring (MRM) in positive mode; the specific …

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Deficiency Of Splicing Factor 1 (Sf1) Reduces Intestinal Polyp Incidence In ApcMin/+ Mice, Jyotsna D. Godavarthi, Shahrazad Polk, Lisa Nunez, Amruthesh Shivachar, Nancy L. Glenn Griesinger, Angabin Matin Nov 2020

Deficiency Of Splicing Factor 1 (Sf1) Reduces Intestinal Polyp Incidence In ApcMin/+ Mice, Jyotsna D. Godavarthi, Shahrazad Polk, Lisa Nunez, Amruthesh Shivachar, Nancy L. Glenn Griesinger, Angabin Matin

Faculty Publications

Background: Splicing factor 1 (SF1) is a conserved alternative splicing factor expressed in many different mammalian cell types. The genetically modified Sf1+/− (or Sf1β-geo/+ ) mice express reduced levels of SF1 protein in mouse tissues, including in cells of the intestines. Mutational inactivation of human adenomatous polyposis coli (APC) gene deregulates the Wnt signaling pathway and is a frequent genetic event in colon cancers. Mice with a point mutation in the Apc gene (ApcMin/+ ) also develop numerous intestinal polyps at a young age. Our aim was to determine the effect of reduced SF1 levels on polyp development due to …

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Histone Deacetylase Inhibitors As Multitarget-Directed Epi-Drugs In Blocking Pi3k Oncogenic Signaling: A Polypharmacology Approach, Kasturi Ranganna, Chelliah Selvam, Amruthesh Shivachar, Zivar Yousefipour Nov 2020

Histone Deacetylase Inhibitors As Multitarget-Directed Epi-Drugs In Blocking Pi3k Oncogenic Signaling: A Polypharmacology Approach, Kasturi Ranganna, Chelliah Selvam, Amruthesh Shivachar, Zivar Yousefipour

Faculty Publications

Genetic mutations and aberrant epigenetic alterations are the triggers for carcinogenesis. The emergence of the drugs targeting epigenetic aberrations has provided a better outlook for cancer treatment. Histone deacetylases (HDACs) are epigenetic modifiers playing critical roles in numerous key biological functions. Inappropriate expression of HDACs and dysregulation of PI3K signaling pathway are common aberrations observed in human diseases, particularly in cancers. Histone deacetylase inhibitors (HDACIs) are a class of epigenetic small-molecular therapeutics exhibiting promising applications in the treatment of hematological and solid malignancies, and in non-neoplastic diseases. Although HDACIs as single agents exhibit synergy by inhibiting HDAC and the PI3K …

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Community Context And Dispersal Stochasticity Drive Variation In Spatial Spread, Tad Dallas, Brett Melbourne, Alan Hastings Nov 2020

Community Context And Dispersal Stochasticity Drive Variation In Spatial Spread, Tad Dallas, Brett Melbourne, Alan Hastings

Faculty Publications

© 2020 British Ecological Society Dispersal is a key process in shaping species spatial distributions. Species interactions and variation in dispersal probabilities may jointly influence species spatial dynamics. However, many studies examine dispersal as a neutral process, independent of community context or intraspecific variation in dispersal behaviour. Here, we use controlled, replicated communities of two Tribolium species (T. castaneum and T. confusum) to examine how intraspecific variation in dispersal behaviour and community context influence dispersal dynamics in simple experimental landscapes composed of homogeneous habitat patches. We found considerable individual-level variation in dispersal probability that was unrelated to body size variation. …

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Early Intracellular Trafficking And Subsequent Activity Of Programmed Cell Death In Channel Catfish Macrophages Infected With Edwardsiella Ictaluri, Lidiya P. Dubytska, Ronald L. Thune Nov 2020

Early Intracellular Trafficking And Subsequent Activity Of Programmed Cell Death In Channel Catfish Macrophages Infected With Edwardsiella Ictaluri, Lidiya P. Dubytska, Ronald L. Thune

Faculty Publications

© 2020 by the authors. Licensee MDPI, Basel, Switzerland. The development of Edwardsiella-containing-vacuoles (ECV) and the ability of Edwardsiella ictaluri to survive and replicate within macrophages suggests a unique process relative to normal phagosomal/lysosomal maturation and programed cell death. Developing ECV showed that endosomal membrane markers Rab5, EEA1, and Rab7 were all detected in both the wild type (WT) and an E. ictaluri type-3 secretion system (T3SS) mutant, 65ST. Co-localization with Lamp1, however, was significantly lower in the WT. The host cell endoplasmic reticulum marker, calnexin, co-localized to 65ST ECV significantly more than WT ECV, while Golgi vesicle marker, giantin, …

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Psychological, Addictive, And Health Behavior Implications Of The Covid-19 Pandemic, Michael J. Zvolensky, Lorra Garey, Andrew H. Rogers, Norman B. Schmidt, Anka .. Vujanovic, Eric A. Storch, Julia D. Buckner, Daniel J. Paulus, Candice Alfano, Jasper A. J. Smits, Connall O'Cleirigh Nov 2020

Psychological, Addictive, And Health Behavior Implications Of The Covid-19 Pandemic, Michael J. Zvolensky, Lorra Garey, Andrew H. Rogers, Norman B. Schmidt, Anka .. Vujanovic, Eric A. Storch, Julia D. Buckner, Daniel J. Paulus, Candice Alfano, Jasper A. J. Smits, Connall O'Cleirigh

Faculty Publications

No abstract provided.

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Scale(S) Matter: Deconstructing An Area Of Endemism For Middle American Freshwater Fishes, Diego J. Elías, Caleb D. Mcmahan, Wilfredo A. Matamoros, Adan E. Gómez-González, Kyle R. Piller, Prosanta Chakrabarty Nov 2020

Scale(S) Matter: Deconstructing An Area Of Endemism For Middle American Freshwater Fishes, Diego J. Elías, Caleb D. Mcmahan, Wilfredo A. Matamoros, Adan E. Gómez-González, Kyle R. Piller, Prosanta Chakrabarty

Faculty Publications

© 2020 John Wiley & Sons Ltd Aim: The processes that generate biodiversity occur at finer scales than are often studied, particularly in freshwater systems of the northern Neotropics. We investigate whether fine-scale biogeographic patterns are present within the larger Grijalva–Usumacinta Area of Endemism (AoE) —a region in Middle America where nearly 60% of freshwater fishes are endemic—and if present-day river basins are single historical units. Location: Northern Central America and southern Mexico. Taxon: Freshwater fishes (e.g., Cichlidae, Poeciliidae, Ostariophysi). Methods: We used fine-scale distributional data for freshwater fishes in northern Middle America (based on museum records and fieldwork) and …

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Microbiological, Physicochemical, And Immunological Analysis Of A Commercial Cashew Nut-Based Yogurt, Christopher P. Mattison, Kayanush Aryana, Kristen Clermont, Eric Prestenburg, Steven W. Lloyd, Casey .. Grimm, Richard L. Wasserman Nov 2020

Microbiological, Physicochemical, And Immunological Analysis Of A Commercial Cashew Nut-Based Yogurt, Christopher P. Mattison, Kayanush Aryana, Kristen Clermont, Eric Prestenburg, Steven W. Lloyd, Casey .. Grimm, Richard L. Wasserman

Faculty Publications

Nut-based milks and yogurts are gaining popularity, but may not offer the same benefits as dairy yogurts to consumers. Cashew nuts often cause severe allergic reactions, and cashew nut allergens are stable to several types of processing. To compare its characteristics to dairy yogurt and characterize the effects of fermentation on the Ana o 1-3 cashew nut allergens, a commercial yogurt made from cashew nuts (Cashewgurt) was evaluated for microbiological, physiochemical, and immunological properties. Average counts for lactobacilli and Streptococcus thermophilus were greater than 10 million colony forming units per milliliter, indicating the capacity to provide a health benefit. Cashewgurt …

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A Novel Mutation Of The Narrow Leaf 1 Gene Adversely Affects Plant Architecture In Rice (Oryza Sativa L.), Prasanta K. Subudhi, Richard S. Garcia, Sapphire Coronejo, Teresa B. De Leon Nov 2020

A Novel Mutation Of The Narrow Leaf 1 Gene Adversely Affects Plant Architecture In Rice (Oryza Sativa L.), Prasanta K. Subudhi, Richard S. Garcia, Sapphire Coronejo, Teresa B. De Leon

Faculty Publications

Plant architecture is critical for enhancing the adaptability and productivity of crop plants. Mutants with an altered plant architecture allow researchers to elucidate the genetic network and the underlying mechanisms. In this study, we characterized a novel nal1 rice mutant with short height, small panicle, and narrow and thick deep green leaves that was identified from a cross between a rice cultivar and a weedy rice accession. Bulked segregant analysis coupled with genome re-sequencing and cosegregation analysis revealed that the overall mutant phenotype was caused by a 1395-bp deletion spanning over the last two exons including the transcriptional end site …

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Speciation-By-Depth On Coral Reefs: Sympatric Divergence With Gene Flow Or Cryptic Transient Isolation?, Carlos Prada, Michael E. Hellberg Nov 2020

Speciation-By-Depth On Coral Reefs: Sympatric Divergence With Gene Flow Or Cryptic Transient Isolation?, Carlos Prada, Michael E. Hellberg

Faculty Publications

The distributions of many sister species in the sea overlap geographically but are partitioned along depth gradients. The genetic changes leading to depth segregation may evolve in geographic isolation as a prerequisite to coexistence or may emerge during primary divergence leading to new species. These alternatives can now be distinguished via the power endowed by the thousands of scorable loci provided by second-generation sequence data. Here, we revisit the case of two depth-segregated, genetically isolated ecotypes of the nominal Caribbean candelabrum coral Eunicea flexuosa. Previous analyses based on a handful of markers could not distinguish between models of genetic exchange …

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Mutations In The Pectin Methyltransferase Quasimodo2 Influence Cellulose Biosynthesis And Wall Integrity In Arabidopsis, Juan Du, Alex Kirui, Shixin Huang, Lianglei Wang, William J. Barnes, Sarah N. Kiemle, Yunzhen Zheng, Yue Rui, Mei Ruan, Shiqian Qi, Seong H. Kim, Tuo Wang, Daniel J. Cosgrove, Charles T. Anderson, Chaowen Xiao Nov 2020

Mutations In The Pectin Methyltransferase Quasimodo2 Influence Cellulose Biosynthesis And Wall Integrity In Arabidopsis, Juan Du, Alex Kirui, Shixin Huang, Lianglei Wang, William J. Barnes, Sarah N. Kiemle, Yunzhen Zheng, Yue Rui, Mei Ruan, Shiqian Qi, Seong H. Kim, Tuo Wang, Daniel J. Cosgrove, Charles T. Anderson, Chaowen Xiao

Faculty Publications

© 2020 ASPB. Pectins are abundant in the cell walls of dicotyledonous plants, but how they interact with other wall polymers and influence wall integrity and cell growth has remained mysterious. Here, we verified that QUASIMODO2 (QUA2) is a pectin methyltransferase and determined that QUA2 is required for normal pectin biosynthesis. To gain further insight into how pectin affects wall assembly and integrity maintenance, we investigated cellulose biosynthesis, cellulose organization, cortical microtubules, and wall integrity signaling in two mutant alleles of Arabidopsis (Arabidopsis thaliana) QUA2, qua2 and tsd2. In both mutants, crystalline cellulose content is reduced, cellulose synthase particles move …

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A Coded Aperture Microscope For X-Ray Fluorescence Full-Field Imaging, D. P. Siddons, A. J. Kuczewski, A. K. Rumaiz, R. Tappero, M Idir, K. Nakhoda, J. Khanfri, V. Singh, E. R. Farquhar, M. Sullivan, D. Abel, D. J. Brady, X. Yuan Nov 2020

A Coded Aperture Microscope For X-Ray Fluorescence Full-Field Imaging, D. P. Siddons, A. J. Kuczewski, A. K. Rumaiz, R. Tappero, M Idir, K. Nakhoda, J. Khanfri, V. Singh, E. R. Farquhar, M. Sullivan, D. Abel, D. J. Brady, X. Yuan

Faculty Publications

The design and construction of an instrument for full-field imaging of the X-ray fluorescence emitted by a fully illuminated sample are presented. The aim is to produce an X-ray microscope with a few micrometers spatial resolution, which does not need to scan the sample. Since the fluorescence from a spatially inhomogeneous sample may contain many fluorescence lines, the optic which will provide the magnification of the emissions must be achromatic, i.e. its optical properties must be energy-independent. The only optics which fulfill this requirement in the X-ray regime are mirrors and pinholes. The throughput of a simple pinhole is very …

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Single-Case Experimental Designs For Behavioral Neuroscience, Paul L. Soto Nov 2020

Single-Case Experimental Designs For Behavioral Neuroscience, Paul L. Soto

Faculty Publications

Single-case experimental designs (SCEDs) are commonly used in behavior analytic research but rarely used in behavioral neuroscience research. The recent development of technologies that allow control of the timing of neurobiological events such as gene expression and neuronal firing enable the fruitful application of SCEDs for the study of brain-behavior relations. There are at least 3 benefits expected from applying SCEDs to study how neurobiological events affect behavior. First, SCEDs entail direct within- and across-subject assessments of reliability, likely increasing the probability of replication across studies and encouraging a search for the causes of replication failure when they occur. Second, …

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Utilization Of Deep Learning For Subphenotype Identification In Sepsis-Associated Acute Kidney Injury, Kumardeep Chaudhary, Akhil Vaid, Áine Duffy, Ishan Paranjpe, Suraj Jaladanki, Manish Paranjpe, Kipp Johnson, Avantee Gokhale, Pattharawin Pattharanitima, Kinsuk Chauhan, Ross O’Hagan, Tielman Van Vleck, Steven G. Coca, Richard Cooper, Benjamin Glicksberg, Erwin P. Bottinger, Lili Chan, Girish N. Nadkarni Nov 2020

Utilization Of Deep Learning For Subphenotype Identification In Sepsis-Associated Acute Kidney Injury, Kumardeep Chaudhary, Akhil Vaid, Áine Duffy, Ishan Paranjpe, Suraj Jaladanki, Manish Paranjpe, Kipp Johnson, Avantee Gokhale, Pattharawin Pattharanitima, Kinsuk Chauhan, Ross O’Hagan, Tielman Van Vleck, Steven G. Coca, Richard Cooper, Benjamin Glicksberg, Erwin P. Bottinger, Lili Chan, Girish N. Nadkarni

Faculty Publications

Background and objectives Sepsis-associated AKI is a heterogeneous clinical entity. We aimed to agnostically identify sepsis-associated AKI subphenotypes using deep learning on routinely collected data in electronic health records. Design, setting, participants, & measurements We used the Medical Information Mart for Intensive Care III database, which consists of electronic health record data from intensive care units in a tertiary care hospital in the United States. We included patients ≥18 years with sepsis who developed AKI within 48 hours of intensive care unit admission. We then used deep learning to utilize all available vital signs, laboratory measurements, and comorbidities to identify …

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Effects Of Cold Storage On Life-History Traits Of Aphidius Matricariae, Mehran Rezaei, Ali A. Talebi, Yaghoub Fathipour, Javad Karimzadeh, Mohammad Mehrabadi, Gadi V.P. Reddy Nov 2020

Effects Of Cold Storage On Life-History Traits Of Aphidius Matricariae, Mehran Rezaei, Ali A. Talebi, Yaghoub Fathipour, Javad Karimzadeh, Mohammad Mehrabadi, Gadi V.P. Reddy

Faculty Publications

Aphidius matricariae Haliday (Hymenoptera: Braconidae) is a polyphagous solitary endoparasitoid, attacking more than 40 species of aphids. This parasitoid is an important commercial product of many companies that produce biological control agents. Storage at low temperature increases the shelf life of many biocontrol agents, allowing companies to provide a steady and sufficient supply of insects for biocontrol programs. In the current study, the effects of cold storage of 1-day-old host mummies with A. matricariae for various time periods (5, 10, 15, 20, and 30 days) at 5 °C on the parasitoid’s key life-history traits were investigated. Parameters assessed after storage …

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Potential Link Between Compromised Air Quality And Transmission Of The Novel Corona Virus (Sars-Cov-2) In Affected Areas, M. G. Manoj, M. K. Satheesh Kumar, K. T. Valsaraj, C. Sivan, Soumya K. Vijayan Nov 2020

Potential Link Between Compromised Air Quality And Transmission Of The Novel Corona Virus (Sars-Cov-2) In Affected Areas, M. G. Manoj, M. K. Satheesh Kumar, K. T. Valsaraj, C. Sivan, Soumya K. Vijayan

Faculty Publications

The emergence of a novel human corona virus disease (COVID-19) has been declared as a pandemic by the World Health Organization. One of the mechanisms of airborne transmission of the severe acute respiratory syndrome corona virus (SARS-CoV-2) amid humans is through direct ejection of droplets via sneezing, coughing and vocalizing. Nevertheless, there are ample evidences of the persistence of infectious viruses on inanimate surfaces for several hours to a few days. Through a critical review of the current literature and a preliminary analysis of the link between SARS-CoV-2 transmission and air pollution in the affected regions, we offer a perspective …

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The Effects Of Family Transitions On Depressive Symptoms: Differences Among Young Adults With And Without Childhood Symptoms Of Attention-Deficit/Hyperactivity Disorder, Rhiannon A. Kroeger, Debra Umberson, Daniel A. Powers, Danequa L. Forrest Nov 2020

The Effects Of Family Transitions On Depressive Symptoms: Differences Among Young Adults With And Without Childhood Symptoms Of Attention-Deficit/Hyperactivity Disorder, Rhiannon A. Kroeger, Debra Umberson, Daniel A. Powers, Danequa L. Forrest

Faculty Publications

Attention-deficit/hyperactivity disorder (ADHD) is tied to higher levels of depression, but the social factors that shape these associations are not well understood. This study considers whether family transitions affect depressive symptoms differently for young adults with and without childhood symptoms of ADHD at subthreshold or diagnostic levels. Between-within regression analysis of nationally representative longitudinal survey data shows that transitions into cohabitation and parenthood affect depressive symptoms differently for young adults with and without childhood symptoms of ADHD. Specifically, within-person effects indicate that transitions into cohabitation and parenthood are tied to decreases in depressive symptoms, but only for young adults without …

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Trade-Offs Tip Toward Litter Trapping: Insights From A Little-Known Panamanian Cloud-Forest Treelet, Kyle E. Harms, James W. Dalling, María N. Sánchez De Stapf Nov 2020

Trade-Offs Tip Toward Litter Trapping: Insights From A Little-Known Panamanian Cloud-Forest Treelet, Kyle E. Harms, James W. Dalling, María N. Sánchez De Stapf

Faculty Publications

No abstract provided.

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Writing Standards-Based Lesson Plans To Standards For Technological And Engineering Literacy, Scott Bartholomew, Thomas Loveland, Vanessa Santana Nov 2020

Writing Standards-Based Lesson Plans To Standards For Technological And Engineering Literacy, Scott Bartholomew, Thomas Loveland, Vanessa Santana

Faculty Publications

While written lesson plans may seem like a lot of work, with little purpose or benefit to new teachers, a well-written lesson plan is quite valuable for many reasons. The process of writing lesson plans at the beginning of one’s teaching career can be very time-consuming (Arnett-Hartwick and Cannon, 2019); however, the development of sequenced lessons that result in effective learning must be organized and articulate, not done haphazardly. Designing a lesson through a written document can help a teacher see the pattern, flow, and implications of a lesson and how it will help all students; this can be especially …

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Significance Of Viral Activity For Regulating Heterotrophic Prokaryote Community Dynamics Along A Meridional Gradient Of Stratification In The Northeast Atlantic Ocean, Kristina D.A. Mojica, Corina P.D. Brussaard Nov 2020

Significance Of Viral Activity For Regulating Heterotrophic Prokaryote Community Dynamics Along A Meridional Gradient Of Stratification In The Northeast Atlantic Ocean, Kristina D.A. Mojica, Corina P.D. Brussaard

Faculty Publications

How microbial populations interact influences the availability and flux of organic carbon in the ocean. Understanding how these interactions vary over broad spatial scales is therefore a fundamental aim of microbial oceanography. In this study, we assessed variations in the abundances, production, virus and grazing induced mortality of heterotrophic prokaryotes during summer along a meridional gradient in stratification in the North Atlantic Ocean. Heterotrophic prokaryote abundance and activity varied with phytoplankton biomass, while the relative distribution of prokaryotic subpopulations (ratio of high nucleic acid fluorescent (HNA) and low nucleic acid fluorescent (LNA) cells) was significantly correlated to phytoplankton mortality mode …

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Predators As Agents Of Selection And Diversification, Jerald B. Johnson, Mark C. Belk Oct 2020

Predators As Agents Of Selection And Diversification, Jerald B. Johnson, Mark C. Belk

Faculty Publications

Predation is ubiquitous in nature and can be an important component of both ecological and evolutionary interactions. One of the most striking features of predators is how often they cause evolutionary diversification in natural systems. Here, we review several ways that this can occur, exploring empirical evidence and suggesting promising areas for future work. We also introduce several papers recently accepted in Diversity that demonstrate just how important and varied predation can be as an agent of natural selection. We conclude that there is still much to be done in this field, especially in areas where multiple predator species prey …

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Patterning A Leaf By Establishing Polarities, Darren Manuela, Mingli Xu Oct 2020

Patterning A Leaf By Establishing Polarities, Darren Manuela, Mingli Xu

Faculty Publications

Leaves are the major organ for photosynthesis in most land plants, and leaf structure is optimized for the maximum capture of sunlight and gas exchange. Three polarity axes, the adaxial–abaxial axis, the proximal-distal axis, and the medial-lateral axis are established during leaf development to give rise to a flattened lamina with a large area for photosynthesis and blades that are extended on petioles for maximum sunlight. Adaxial cells are elongated, tightly packed cells with many chloroplasts, and their fate is specified by HD-ZIP III and related factors. Abaxial cells are rounder and loosely packed cells and their fate is established …

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A Numerical Investigation Of Salinity Variations In The Barataria Estuary, Louisiana In Connection With The Mississippi River And Restoration Activities, Yanda Ou, Z. George Xue, Chunyan Li, Kehui Xu, John R. White, Samuel J. Bentley, Zhengchen Zang Oct 2020

A Numerical Investigation Of Salinity Variations In The Barataria Estuary, Louisiana In Connection With The Mississippi River And Restoration Activities, Yanda Ou, Z. George Xue, Chunyan Li, Kehui Xu, John R. White, Samuel J. Bentley, Zhengchen Zang

Faculty Publications

© 2020 Elsevier Ltd A three-dimensional numerical model was applied to the Barataria Estuary in the Northern Gulf of Mexico to study its salinity variations as well as the impacts from the Mississippi River discharges and proposed river diversions. Model-observation comparison showed that the model was able to reproduce the hydrodynamic fields on subtidal to seasonal time scales. Salinity in the Barataria Estuary was high in fall and low in summer, with a greater variability in the lower estuary than the upper estuary. While salinity in the upper estuary was controlled by discharges from a local freshwater diversion, salinity in …

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Using Reactive Dissipative Particle Dynamics To Understand Local Shape Manipulation Of Polymer Vesicles, Qinyu Zhu, Timothy R. Scott, Douglas R. Tree Oct 2020

Using Reactive Dissipative Particle Dynamics To Understand Local Shape Manipulation Of Polymer Vesicles, Qinyu Zhu, Timothy R. Scott, Douglas R. Tree

Faculty Publications

Biological cells have long been of interest to researchers due to their capacity to actively control their shape. Accordingly, there is significant interest in generating simplified synthetic protocells that can alter their shape based on an externally or internally generated stimulus. To date, most progress has been made towards controlling the global shape of a protocell, whereas less is known about generating a local shape change. Here, we seek to better understand the possible mechanisms for producing local morphological changes in a popular protocell system, the block copolymer vesicle. Accordingly, we have combined Dissipative Particle Dynamics (DPD) and the Split …

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Association Between Dietary Inflammatory Index And Type 2 Diabetes Mellitus In Xinjiang Uyghur Autonomous Region, China, Wenhui Fu, Hualian Pei, Nitin Shivaooa, James R. Hébert, Tao Luo, Tian Tian, Dilibaier Alimu, Zewen Zhang, Jianghong Dai Oct 2020

Association Between Dietary Inflammatory Index And Type 2 Diabetes Mellitus In Xinjiang Uyghur Autonomous Region, China, Wenhui Fu, Hualian Pei, Nitin Shivaooa, James R. Hébert, Tao Luo, Tian Tian, Dilibaier Alimu, Zewen Zhang, Jianghong Dai

Faculty Publications

Background Diet and inflammation have both been studied in relation to type 2 diabetes mellitus (T2DM). The aim of this cross-sectional study was to examine the association between the Dietary Inflammatory Index (DII®) and T2DM. Methods Subjects were adults enrolled in the baseline study of the Xinjiang multi-ethnic natural population cohort and health follow-up study from January to May 2019. The study involved 5,105 subjects (58.7% men) between 35 and 74 years of age. The DII score was calculated from a data obtained via a food frequency questionnaire consisting of 127 food items. Results Logistic regression analyses were used to …

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Comparative Efficacies Of Calmare Therapy And Transcutaneous Electrical Nerve Stimulation In Randomized Peripheral Neuropathy Subjects With Resting State Fmri Monitoring, Ty A. Bodily, Logan Edvalson, Jordan B. Peacock, Zack M. Bradshaw, Carson Hart, Cameron Ernst, Samuel Biggs, David D. Busath Oct 2020

Comparative Efficacies Of Calmare Therapy And Transcutaneous Electrical Nerve Stimulation In Randomized Peripheral Neuropathy Subjects With Resting State Fmri Monitoring, Ty A. Bodily, Logan Edvalson, Jordan B. Peacock, Zack M. Bradshaw, Carson Hart, Cameron Ernst, Samuel Biggs, David D. Busath

Faculty Publications

Clinical reports of Calmare protocol efficacy suggest enhanced durability compared to TENS and the possibility changes in resting fMRI connectivity. The objective was to compare peripheral neuropathy pain relief and resting fMRI changes with Calmare and TENS treatments. Randomized double-blind trials performed in August 2015 and between August 2016 and November 2017, with 18 and 20 human peripheral neuropathy subjects, respectively. The initial trial examined effects of a single session while the latter trial examined the effects of a course of ten treatment sessions on consecutive weekdays. fMRI scans were examined for changes in blood flow correlations and connectivity. Subjective …

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