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Global Proteome And Phospho-Proteome Analysis Of Merlin-Deficient Meningioma And Schwannoma Identifies Pdlim2 As A Novel Therapeutic Target, Kayleigh Bassiri, Sara Ferluga, Vikram Sharma, Nelofer Syed, Claire L. Adams, Edwin Lasonder, C. Oliver Hanemann Feb 2017

Global Proteome And Phospho-Proteome Analysis Of Merlin-Deficient Meningioma And Schwannoma Identifies Pdlim2 As A Novel Therapeutic Target, Kayleigh Bassiri, Sara Ferluga, Vikram Sharma, Nelofer Syed, Claire L. Adams, Edwin Lasonder, C. Oliver Hanemann

School of Biomedical Sciences

No abstract provided.


The Effects Of Warming On The Ecophysiology Of Two Co-Existing Kelp Species With Contrasting Distributions, Ms Hargrave, A Foggo, A Pessarrodona, Da Smale Feb 2017

The Effects Of Warming On The Ecophysiology Of Two Co-Existing Kelp Species With Contrasting Distributions, Ms Hargrave, A Foggo, A Pessarrodona, Da Smale

School of Biological and Marine Sciences

No abstract provided.


Making Sense Of Words: A Robotic Model For Language Abstraction, F Stramandinoli, D Marocco, A Cangelosi Feb 2017

Making Sense Of Words: A Robotic Model For Language Abstraction, F Stramandinoli, D Marocco, A Cangelosi

School of Engineering, Computing and Mathematics

Building robots capable of acting independently in unstructured environments is still a challenging task for roboticists. The capability to comprehend and produce language in a ‘human-like’ manner represents a powerful tool for the autonomous interaction of robots with human beings, for better understanding situations and exchanging information during the execution of tasks that require cooperation. In this work, we present a robotic model for grounding abstract action words (i.e. USE, MAKE) through the hierarchical organization of terms directly linked to perceptual and motor skills of a humanoid robot. Experimental results have shown that the robot, in response to linguistic commands, …


Ecological Role Of Submarine Canyons And Need For Canyon Conservation: A Review, Ulla Fernandez-Arcaya, Eva Ramirez-Llodra, Jacopo Aguzzi, A. Louise Allcock, Jaime S. Davies, Awantha Dissanayake, Peter Harris, Kerry Howell, Veerle A.I. Huvenne, Miles Macmillan-Lawler, Jacobo Martín, Lenaick Menot, Martha Nizinski, Pere Puig, Ashley A. Rowden, Florence Sanchez, Den Beld Imj Van Jan 2017

Ecological Role Of Submarine Canyons And Need For Canyon Conservation: A Review, Ulla Fernandez-Arcaya, Eva Ramirez-Llodra, Jacopo Aguzzi, A. Louise Allcock, Jaime S. Davies, Awantha Dissanayake, Peter Harris, Kerry Howell, Veerle A.I. Huvenne, Miles Macmillan-Lawler, Jacobo Martín, Lenaick Menot, Martha Nizinski, Pere Puig, Ashley A. Rowden, Florence Sanchez, Den Beld Imj Van

School of Biological and Marine Sciences

No abstract provided.


Obtaining Accurate Glucose Measurements From Wild Animals Under Field Conditions: Comparing A Hand Held Glucometer With A Standard Laboratory Technique In Grey Seals, Kimberley A. Bennett, Lucy M. Turner, Sebastian Millward, Simon E.W. Moss, Ailsa J. Hall Jan 2017

Obtaining Accurate Glucose Measurements From Wild Animals Under Field Conditions: Comparing A Hand Held Glucometer With A Standard Laboratory Technique In Grey Seals, Kimberley A. Bennett, Lucy M. Turner, Sebastian Millward, Simon E.W. Moss, Ailsa J. Hall

School of Biological and Marine Sciences

No abstract provided.


Merlin Controls The Repair Capacity Of Schwann Cells After Injury By Regulating Hippo/Yap Activity, Thomas Mindos, Xin Peng Dun, Katherine North, Robin D.S. Doddrell, Alexander Schulz, Philip Edwards, James Russell, Bethany Gray, Sheridan L. Roberts, Aditya Shivane, Georgina Mortimer, Melissa Pirie, Nailing Zhang, Duojia Pan, Helen Morrison, David B. Parkinson Jan 2017

Merlin Controls The Repair Capacity Of Schwann Cells After Injury By Regulating Hippo/Yap Activity, Thomas Mindos, Xin Peng Dun, Katherine North, Robin D.S. Doddrell, Alexander Schulz, Philip Edwards, James Russell, Bethany Gray, Sheridan L. Roberts, Aditya Shivane, Georgina Mortimer, Melissa Pirie, Nailing Zhang, Duojia Pan, Helen Morrison, David B. Parkinson

Peninsula Medical School

Loss of the Merlin tumor suppressor and activation of the Hippo signaling pathway play major roles in the control of cellproliferation and tumorigenesis. We have identified completely novel roles for Merlin and the Hippo pathway effectorYes-associated protein (YAP) in the control of Schwann cell (SC) plasticity and peripheral nerve repair after injury. Injuryto the peripheral nervous system (PNS) causes a dramatic shift in SC molecular phenotype and the generation of repaircompetent SCs, which direct functional repair. We find that loss of Merlin in these cells causes a catastrophic failure ofaxonal regeneration and remyelination in the PNS. This effect is mediated …


Electrophysiological Correlates Of Motion Extrapolation: An Investigation On The Cnv, Luca Battaglini, Clara Casco, Bethany Rose Isaacs, David Bridges, Giorgio Ganis Jan 2017

Electrophysiological Correlates Of Motion Extrapolation: An Investigation On The Cnv, Luca Battaglini, Clara Casco, Bethany Rose Isaacs, David Bridges, Giorgio Ganis

School of Psychology

No abstract provided.


Effects Of The Social Environment During Adolescence On The Development Of Social Behaviour, Hormones And Morphology In Male Zebra Finches (Taeniopygia Guttata), Stefanie Bölting, N Von Engelhardt Jan 2017

Effects Of The Social Environment During Adolescence On The Development Of Social Behaviour, Hormones And Morphology In Male Zebra Finches (Taeniopygia Guttata), Stefanie Bölting, N Von Engelhardt

School of Biological and Marine Sciences

No abstract provided.


Infestation Of Shore Crab Gills By A Free-Living Mussel Species, Rowan Poulter, P. Graham Oliver, Chris Hauton, Trystan Sanders, Benjamin J. Ciotti Jan 2017

Infestation Of Shore Crab Gills By A Free-Living Mussel Species, Rowan Poulter, P. Graham Oliver, Chris Hauton, Trystan Sanders, Benjamin J. Ciotti

School of Biological and Marine Sciences

No abstract provided.


Invasive Species In The Northeastern And Southwestern Atlantic Ocean: A Review, Maria Cecilia T.De Castro, Timothy W. Fileman, Jason M. Hall-Spencer Jan 2017

Invasive Species In The Northeastern And Southwestern Atlantic Ocean: A Review, Maria Cecilia T.De Castro, Timothy W. Fileman, Jason M. Hall-Spencer

School of Biological and Marine Sciences

No abstract provided.


Does Repeatable Behaviour In The Laboratory Represent Behaviour Under Natural Conditions? A Formal Comparison In Sea Anemones, Andrew Osborn, Mark Briffa Jan 2017

Does Repeatable Behaviour In The Laboratory Represent Behaviour Under Natural Conditions? A Formal Comparison In Sea Anemones, Andrew Osborn, Mark Briffa

School of Biological and Marine Sciences

No abstract provided.


Interactive Musical Biocomputer: An Unconventional Approach To Research In Unconventional Computing, Er Miranda, Ew Braund Jan 2017

Interactive Musical Biocomputer: An Unconventional Approach To Research In Unconventional Computing, Er Miranda, Ew Braund

School of Art, Design and Architecture

Computer music is a truly interdisciplinary field; practitioners are well known for experimenting with new and developing technologies from a wide span of disciplines. Such experimentation is a tradition that stems back to the genesis of computer music, where a mathematician with a musical background programmed an early computer in the early 1950s to play a tune. The area of computer music has since evolved in tandem with advances made in computing technology. We are interested in studying how new unconventional models of computation may provide new pathways for music and related technologies. Unconventional computing develops new algorithms and computing …


Permanent Draft Genome Of Thiobacillus Thioparus Dsm 505t, An Obligately Chemolithoautotrophic Member Of The Betaproteobacteria, Lee P. Hutt, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, Tatiparthi Reddy, Chris Daum, Nicole Shapiro, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Rich Boden Jan 2017

Permanent Draft Genome Of Thiobacillus Thioparus Dsm 505t, An Obligately Chemolithoautotrophic Member Of The Betaproteobacteria, Lee P. Hutt, Marcel Huntemann, Alicia Clum, Manoj Pillay, Krishnaveni Palaniappan, Neha Varghese, Natalia Mikhailova, Dimitrios Stamatis, Tatiparthi Reddy, Chris Daum, Nicole Shapiro, Natalia Ivanova, Nikos Kyrpides, Tanja Woyke, Rich Boden

School of Biomedical Sciences

Thiobacillus thioparus DSM 505T is one of first two isolated strains of inorganic sulfur-oxidising Bacteria. The original strain of T. thioparus was lost almost 100 years ago and the working type strain is Culture CT (=DSM 505T = ATCC 8158T) isolated by Starkey in 1934 from agricultural soil at Rutgers University, New Jersey, USA. It is an obligate chemolithoautotroph that conserves energy from the oxidation of reduced inorganic sulfur compounds using the Kelly-Trudinger pathway and uses it to fix carbon dioxide It is not capable of heterotrophic or mixotrophic growth. The strain has a genome …


Predicting Copper Speciation In Estuarine Waters – Is Dissolved Organic Carbon A Good Proxy For The Presence Of Organic Ligands?, Holly B.C. Pearson, Sean D.W. Comber, Charlotte Braungardt, Paul J. Worsfold Jan 2017

Predicting Copper Speciation In Estuarine Waters – Is Dissolved Organic Carbon A Good Proxy For The Presence Of Organic Ligands?, Holly B.C. Pearson, Sean D.W. Comber, Charlotte Braungardt, Paul J. Worsfold

School of Geography, Earth and Environmental Sciences

No abstract provided.


A Spiking Neurocomputational Model Of High-Frequency Oscillatory Brain Responses To Words And Pseudowords, Max Garagnani, Guglielmo Lucchese, Rosario Tomasello, Thomas Wennekers, Friedemann Pulvermüller Jan 2017

A Spiking Neurocomputational Model Of High-Frequency Oscillatory Brain Responses To Words And Pseudowords, Max Garagnani, Guglielmo Lucchese, Rosario Tomasello, Thomas Wennekers, Friedemann Pulvermüller

School of Engineering, Computing and Mathematics

No abstract provided.


Learning Robot Control Using A Hierarchical Som-Based Encoding, Ts Dahl, G Pierris Jan 2017

Learning Robot Control Using A Hierarchical Som-Based Encoding, Ts Dahl, G Pierris

School of Engineering, Computing and Mathematics

Hierarchical representations and modeling of sensorimotor observations is a fundamental approach for the development of scalable robot control strategies. Previously, we introduced the novel Hierarchical Self-Organizing Map-based Encoding algorithm (HSOME) that is based on a computational model of infant cognition. Each layer is a temporally augmented SOM and every node updates a decaying activation value. The bottom level encodes sensori-motor instances while their temporal associations are hierarchically built on the layers above. In the past, HSOME has shown to support hierarchical encoding of sequential sensor-actuator observations both in abstract domains and real humanoid robots. Two novel features are presented here …


Bulk-Carbonate And Belemnite Carbon-Isotope Records Across The Pliensbachian-Toarcian Boundary On The Northern Margin Of Gondwana (Issouka, Middle Atlas, Morocco), Fatima Zahra Ait-Itto, Gregory D. Price, Addi A Ait, Driss Chafiki, Imane Mannani Jan 2017

Bulk-Carbonate And Belemnite Carbon-Isotope Records Across The Pliensbachian-Toarcian Boundary On The Northern Margin Of Gondwana (Issouka, Middle Atlas, Morocco), Fatima Zahra Ait-Itto, Gregory D. Price, Addi A Ait, Driss Chafiki, Imane Mannani

School of Geography, Earth and Environmental Sciences

No abstract provided.


Shipping Noise In A Dynamic Sea: A Case Study Of Grey Seals In The Celtic Sea, F. Chen, G. I. Shapiro, K. A. Bennett, S. N. Ingram, D. Thompson, C. Vincent, D. J.F. Russell, C. B. Embling Jan 2017

Shipping Noise In A Dynamic Sea: A Case Study Of Grey Seals In The Celtic Sea, F. Chen, G. I. Shapiro, K. A. Bennett, S. N. Ingram, D. Thompson, C. Vincent, D. J.F. Russell, C. B. Embling

School of Biological and Marine Sciences

No abstract provided.


Divergent Demographic Strategies Of Plants In Variable Environments, Jenni L. Mcdonald, Miguel Franco, Stuart Townley, Thomas H.G. Ezard, Kim Jelbert, Dave J. Hodgson Jan 2017

Divergent Demographic Strategies Of Plants In Variable Environments, Jenni L. Mcdonald, Miguel Franco, Stuart Townley, Thomas H.G. Ezard, Kim Jelbert, Dave J. Hodgson

School of Biological and Marine Sciences

One of the best-supported patterns in life history evolution is that organisms cope with environmental fluctuations by buffering their most important vital rates against them. This demographic buffering hypothesis is evidenced by a tendency for temporal variation in rates of survival and reproduction to correlate negatively with their contribution to fitness. Here, we show that widespread evidence for demographic buffering can be artefactual, resulting from natural relationships between the mean and variance of vital rates. Following statistical scaling, we find no significant tendency for plant life histories to be buffered demographically. Instead, some species are buffered, whereas others have labile …


Understanding The Goals Of Everyday Instrumental Actions Is Primarily Linked To Object, Not Motor-Kinematic, Information: Evidence From Fmri, Toby Nicholson, Matt Roser, Patric Bach Jan 2017

Understanding The Goals Of Everyday Instrumental Actions Is Primarily Linked To Object, Not Motor-Kinematic, Information: Evidence From Fmri, Toby Nicholson, Matt Roser, Patric Bach

School of Psychology

No abstract provided.


On Building Practical Biocomputers For Real-World Applications: Receptacles For Culturing Slime Mould Memristors And Component Standardisation, Eduardo Reck Miranda, Edward Braund Jan 2017

On Building Practical Biocomputers For Real-World Applications: Receptacles For Culturing Slime Mould Memristors And Component Standardisation, Eduardo Reck Miranda, Edward Braund

School of Art, Design and Architecture

No abstract provided.


Two Independent S-Phase Checkpoints Regulate Appressorium-Mediated Plant Infection By The Rice Blast Fungus Magnaporthe Oryzae, M Osés-Ruiz, W Sakulkoo, Gr Littlejohn, M Martin-Urdiroz, Nj Talbot Jan 2017

Two Independent S-Phase Checkpoints Regulate Appressorium-Mediated Plant Infection By The Rice Blast Fungus Magnaporthe Oryzae, M Osés-Ruiz, W Sakulkoo, Gr Littlejohn, M Martin-Urdiroz, Nj Talbot

School of Biological and Marine Sciences

No abstract provided.


Evidence For Genetic Heterogeneity Between Clinical Subtypes Of Bipolar Disorder, Aw Charney, Dm Ruderfer, Ea Stahl, Et Al Jan 2017

Evidence For Genetic Heterogeneity Between Clinical Subtypes Of Bipolar Disorder, Aw Charney, Dm Ruderfer, Ea Stahl, Et Al

School of Biomedical Sciences

We performed a genome-wide association study of 6447 bipolar disorder (BD) cases and 12 639 controls from the International Cohort Collection for Bipolar Disorder (ICCBD). Meta-analysis was performed with prior results from the Psychiatric Genomics Consortium Bipolar Disorder Working Group for a combined sample of 13 902 cases and 19 279 controls. We identified eight genome-wide significant, associated regions, including a novel associated region on chromosome 10 (rs10884920; P=3.28 × 10−8) that includes the brain-enriched cytoskeleton protein adducin 3 (ADD3), a non-coding RNA, and a neuropeptide-specific aminopeptidase P (XPNPEP1). Our large sample size allowed us to test the heritability and …


Regional Adaptation Defines Sensitivity To Future Ocean Acidification, Piero Calosi, Sedercor Melatunan, Lucy M. Turner, Yuri Artioli, Robert L. Davidson, Jonathan J. Byrne, Mark R. Viant, Stephen Widdicombe, Simon D. Rundle Jan 2017

Regional Adaptation Defines Sensitivity To Future Ocean Acidification, Piero Calosi, Sedercor Melatunan, Lucy M. Turner, Yuri Artioli, Robert L. Davidson, Jonathan J. Byrne, Mark R. Viant, Stephen Widdicombe, Simon D. Rundle

School of Biological and Marine Sciences

No abstract provided.


Real-Time Kinetic Binding Studies At Attomolar Concentrations In Solution Phase Using A Single-Stage Opto-Biosensing Platform Based Upon Infrared Surface Plasmons, T Allsop, C Mou, R Neal, S Mariani, Et Al Jan 2017

Real-Time Kinetic Binding Studies At Attomolar Concentrations In Solution Phase Using A Single-Stage Opto-Biosensing Platform Based Upon Infrared Surface Plasmons, T Allsop, C Mou, R Neal, S Mariani, Et Al

School of Engineering, Computing and Mathematics

Here we present a new generic opto-bio-sensing platform combining immobilised aptamers on an infrared plasmonic sensing device generated by nano-structured thin film that demonstrates amongst the highest index spectral sensitivities of any optical fibre sensor yielding on average 3.4 × 104 nm/RIU in the aqueous index regime (with a figure of merit of 330) This offers a single stage, solution phase, atto-molar detection capability, whilst delivering real-time data for kinetic studies in water-based chemistry. The sensing platform is based upon optical fibre and has the potential to be multiplexed and used in remote sensing applications. As an example of the …


The Database Of The Predicts (Projecting Responses Of Ecological Diversity In Changing Terrestrial Systems) Project, Lawrence N. Hudson, Tim Newbold, Sara Contu, Samantha L.L. Hill, Igor Lysenko, Palma A De, Helen R.P. Phillips, Tamera I. Alhusseini, Felicity E. Bedford, Dominic J. Bennett, Hollie Booth, Victoria J. Burton, Charlotte W.T. Chng, Argyrios Choimes, David L.P. Correia, Julie Day, Susy Echeverría-Londoño, Susan R. Emerson, Di Gao, Morgan Garon, Michelle L.K. Harrison, Daniel J. Ingram, M Jung, Victoria Kemp, Lucinda Kirkpatrick, Callum D. Martin, Yuan Pan, Gwilym D. Pask-Hale, Edwin L. Pynegar, An Robinson Jan 2017

The Database Of The Predicts (Projecting Responses Of Ecological Diversity In Changing Terrestrial Systems) Project, Lawrence N. Hudson, Tim Newbold, Sara Contu, Samantha L.L. Hill, Igor Lysenko, Palma A De, Helen R.P. Phillips, Tamera I. Alhusseini, Felicity E. Bedford, Dominic J. Bennett, Hollie Booth, Victoria J. Burton, Charlotte W.T. Chng, Argyrios Choimes, David L.P. Correia, Julie Day, Susy Echeverría-Londoño, Susan R. Emerson, Di Gao, Morgan Garon, Michelle L.K. Harrison, Daniel J. Ingram, M Jung, Victoria Kemp, Lucinda Kirkpatrick, Callum D. Martin, Yuan Pan, Gwilym D. Pask-Hale, Edwin L. Pynegar, An Robinson

School of Biological and Marine Sciences

No abstract provided.


Microplastics Affect The Ecological Functioning Of An Important Biogenic Habitat., Ds Green, B Boots, Ne O'Connor, R Thompson Jan 2017

Microplastics Affect The Ecological Functioning Of An Important Biogenic Habitat., Ds Green, B Boots, Ne O'Connor, R Thompson

School of Biological and Marine Sciences

Biological effects of microplastics on the health of bivalves have been demonstrated elsewhere, but ecological impacts on the biodiversity and ecosystem functioning of bivalve-dominated habitats are unknown. Thus, we exposed intact sediment cores containing European flat oysters (Ostrea edulis) or blue mussels (Mytilus edulis) in seawater to two different densities (2.5 or 25 μg L(-1)) of biodegradable or conventional microplastics in outdoor mesocosms. We hypothesized that filtration rates of the bivalves, inorganic nitrogen cycling, primary productivity of sediment dwelling microphytobenthos, and the structure of invertebrate benthic assemblages would be influenced by microplastics. After 50 days, filtration by M. edulis was …


Pharmaceutical Metabolism In Fish: Using A 3-D Hepatic In Vitro Model To Assess Clearance, Matthew G. Baron, Kate S. Mintram, Stewart F. Owen, Malcolm J. Hetheridge, A. John Moody, Wendy M. Purcell, Simon K. Jackson, Awadhesh N. Jha Jan 2017

Pharmaceutical Metabolism In Fish: Using A 3-D Hepatic In Vitro Model To Assess Clearance, Matthew G. Baron, Kate S. Mintram, Stewart F. Owen, Malcolm J. Hetheridge, A. John Moody, Wendy M. Purcell, Simon K. Jackson, Awadhesh N. Jha

School of Biological and Marine Sciences

No abstract provided.


A Preliminary Investigation Into The Restorative Potential Of Public Aquaria Exhibits: A Uk Student-Based Study, Deborah Cracknell, Mathew P. White, Sabine Pahl, Michael H. Depledge Jan 2017

A Preliminary Investigation Into The Restorative Potential Of Public Aquaria Exhibits: A Uk Student-Based Study, Deborah Cracknell, Mathew P. White, Sabine Pahl, Michael H. Depledge

School of Psychology

No abstract provided.


A Reference Computational Model To Manage The Semantics Of Learning Environments Using Swrl Enabled Owl Ontologies, Eiman Almami Jan 2017

A Reference Computational Model To Manage The Semantics Of Learning Environments Using Swrl Enabled Owl Ontologies, Eiman Almami

School of Engineering, Computing and Mathematics Theses

This thesis proposes a reference model and its computational core to support the creation of software applications within educational environments, which address Differences In Learning (DiffInL) and are applicable to both learners and instructors. This work differs from others in that the strength of this model resides on the re-usable character of the reasoning mechanism enabled by the computational environment. The starting point is the definition of agreed learning goals that the learner needs to achieve. In turn, the reference model generates personalised, best-practice teaching and learning materials, suitable for achieving the individual’s learning goals. This reference model consists of …