Digital Commons Network^™

Surface Chemistry Of Femtosecond Laser Processed Surfaces, Graham Kaufman

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

Micromachining and surface functionalization with femtosecond lasers is a rapidly developing technology in the field of materials and interfacial sciences due to its flexibility towards materials, tunability in surface features, and prospects for scalability. Many interfacial applications have been shown to be enhanced with femtosecond laser-induced surface texturing including two-phase heat transfer, antimicrobial properties, electrochemical systems and more. However, without ideal surface chemistry, the enhancements cannot be optimized for a given application. Surfaces functionalized by femtosecond lasers tend to have transient surface chemistries when exposed to the atmosphere, changing important interfacial properties like the interaction of the solid surfaces and …

The Effects Of Partisanship On Legislative Support For Environmental Policies In The United States, Rachel Summers

Department of Environmental Studies: Undergraduate Student Theses

This study investigates the relationship between political partisanship and support for environmental policies at the state level in the United States from the years 2017-2022. To do this, the study focused on two policy areas, water and land, for the average proposed, enacted, and failed bills for all 50 states in the timeframe, with the states categorized as Democratic, swing, or Republican based on the 2016 and 2020 elections. While the study did find that Democratic states were more likely to introduce environmental bills than Republican states, the study also found that there was no statistical difference in the enactment …

Charging Forward: A Comparative Analysis Of Facilitators To Electric Vehicle Adoption In Three U.S. States, Abigail Schroeder

Department of Environmental Studies: Undergraduate Student Theses

Electric vehicles (EVs) are a way to reduce greenhouse gas emissions from transportation, but low consumer adoption rates present a challenge. In order to understand what factors may facilitate EV adoption, a comparative analysis of three U.S. states was performed. These states have the highest rates of EV adoption in the country. Thus, studying them provided insights into what may make EV adoption successful. California, Hawaii, and Washington are the states with the highest EV adoption rates. Based on previous research, a list of 12 characteristics that may influence EV adoption was compiled and applied to each state, focusing on …

Impact Of Pollution On Marginalized Communities: Case Study Of Omaha, Nebraska, Miqaela Davis

Department of Environmental Studies: Undergraduate Student Theses

Environmental justice has been a struggle within our country for years. The goal of Environmental justice is for the fair treatment and equal voice for every single individual regardless of race, income, gender, etc. There has been environmental injustice and racism in many cities, but this study focuses on Omaha, Nebraska. Key questions include: What are some specific pollutants that are prevalent in areas with differing racial majorities in Omaha? What are some of the health patterns in these areas and does it relate to environmental racism? How has Omaha reinforced environmental racism through city planning? Using the Climate and …

Educational Influences On Environmental Perception: A Semester Analysis Of The New Ecological Paradigm Scale In Undergraduates, Zoe Zingler

Department of Environmental Studies: Undergraduate Student Theses

This study evaluated the impact of a geography course, GEOG 181: Global Environmental Issues, at the University of Nebraska-Lincoln on students’ endorsement of the New Ecological Paradigm (NEP) using a pre-course and post-course NEP scale survey. Analyzing paired responses (n = 40) through t-tests and z-scores, only four of 15 statements had statistically significant shifts observed for the entire sample. However, a targeted analysis of students initially possessing lower endorsement of the NEP—early deniers—revealed significant paradigm shifts post-course. While women initially showed stronger NEP endorsement, men demonstrated notable changes following the course towards endorsement of the NEP. Academic majors, whether …

Sliding Markov Decision Processes For Dynamic Task Planning On Uncrewed Aerial Vehicles, Trent Wiens

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

Mission and flight planning problems for uncrewed aircraft systems (UASs) are typically large and complex in space and computational requirements. With enough time and computing resources, some of these problems may be solvable offline and then executed during flight. In dynamic or uncertain environments, however, the mission may require online adaptation and replanning. In this work, we will discuss methods of creating MDPs for online applications, and a method of using a sliding resolution and receding horizon approach to build and solve Markov Decision Processes (MDPs) in practical planing applications for UASs. In this strategy, called a Sliding Markov Decision …

Development Of A Multi-Use Modular Microfluidic Platform Using 3d Printing, Carson Emeigh

Department of Mechanical and Materials Engineering: Dissertations, Theses, and Student Research

Microfluidic lab-on-a-chip (LoC) technology has driven numerous innovations due to their ability to perform laboratory-scale experiments on a single chip using microchannels. Although LoC technology has been innovative, it still suffers from limitations related to its fabrication and design flexibility. Typical LoC fabrication, with photolithography, is time consuming, expensive, and inflexible. To overcome the limitations of LoC devices, modular microfluidic platforms have been developed where multiple microfluidic modules, each with a specific function or group of functions, can be combined on a single platform. Modular microfluidics have overcome some of the limitations of LoC devices, but currently, their fabrication is …

Breakaway Luminaire Pole Research, Jacob Conway

Department of Civil and Environmental Engineering: Dissertations, Theses, and Student Research

This document reports the efforts conducted to determine critical parameters and configurations for Manual for Assessing Safety Hardware 2016 (MASH) Test Level 3 (TL-3) compliant breakaway luminaire poles supported by slip bases, including identifying pole configurations with the potential to meet MASH TL-3 as well as recommending critical configurations for full-scale crash testing. A thorough literature review was conducted which included survey results collected from Midwest Pooled Fund state departments of transportation (DOTs), standard plans from state DOT’s, and past luminaire pole testing.

Numerical LS-DYNA models were developed for luminaire poles with 4-bolt slip base utilized by the Utah Department …

Bidding Strategy For A Wind Power Producer In Us Energy And Reserve Markets, Anne Stratman

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

Wind power is one of the world's fastest-growing renewable energy resources and has expanded quickly within the US electric grid. Currently, wind power producers (WPPs) may sell energy products in US markets but are not allowed to sell reserve products, due to the uncertain and intermittent nature of wind power. However, as wind’s share of the power supply grows, it may eventually be necessary for WPPs to contribute to system-wide reserves. This paper proposes a stochastic optimization model to determine the optimal offer strategy for a WPP that participates in the day-ahead and real-time energy and spinning reserve markets. The …

Vr Circuit Simulation With Advanced Visualization For Enhancing Comprehension In Electrical Engineering, Elliott Wolbach

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

As technology advances, the field of electrical and computer engineering continuously demands innovative tools and methodologies to facilitate effective learning and comprehension of fundamental concepts. Through a comprehensive literature review, it was discovered that there was a gap in the current research on using VR technology to effectively visualize and comprehend non-observable electrical characteristics of electronic circuits. This thesis explores the integration of Virtual Reality (VR) technology and real-time electronic circuit simulation with enhanced visualization of non-observable concepts such as voltage distribution and current flow within these circuits. The primary objective is to develop an immersive educational platform that makes …

An Investigation Of Information Structures In Dna, Joel Mohrmann

Department of Electrical and Computer Engineering: Dissertations, Theses, and Student Research

The information-containing nature of the DNA molecule has been long known and observed. One technique for quantifying the relationships existing within the information contained in DNA sequences is an entity from information theory known as the average mutual information (AMI) profile. This investigation sought to use principally the AMI profile along with a few other metrics to explore the structure of the information contained in DNA sequences.

Treating DNA sequences as an information source, several computational methods were employed to model their information structure. Maximum likelihood and maximum a posteriori estimators were used to predict missing bases in DNA sequences. …

Concepts In Animal Parasitology: Master Bibliography, Sue Ann Gardner

Concepts in Animal Parasitology

Master bibliography for the open educational resource/open access textbook Concepts in Animal Parasitology, Scott L. Gardner and Sue Ann Gardner, editors, published by Zea Books, Lincoln, Nebraska, United States, 2024. This includes the references from literature cited and suggested supplemental reading.

How Gender Affirming Care Affects The Current Sex Estimation Standards In Forensic Anthropology: A Preliminary Study, Dakota Taylor

Department of Anthropology: Theses and Student Research

Current sex estimation standards in forensic anthropology are based on individuals whose gender matches their biological/osteological sex, also known as Cisgendered individuals. Recently, transgender individuals have started to become more common in the forensic context due to the increase in hate crimes and violence. This research builds upon past research done on how facial feminization surgery can affect both visual and metric methods, where it was found that forensic anthropologists should rely on the visual methods if they suspect someone to be transgender due to it being more accurate and being able to clearly state the scars left on the …

Numerical Variations In The Thoracic And Lumbar Vertebrae Within The John A. Williams Skeletal Collection, Western Carolina University, Cullowhee, Nc (Usa), Leanna Annette Sanford

Department of Anthropology: Theses and Student Research

This research is on how human variation can lead to the identification of remains based on skeletal variation. The data were collected by performing a morphoscopic trait study of the John A. Williams (J.A.W.) Documented Human Skeletal Collection at Western Carolina University in Cullowhee, NC (USA). Morphoscopic traits are nonmetric traits, visually identified using the knowledge of osteology. The study was performed to study variation of the vertebral column, specifically focusing on morphoscopic traits of the thoracic and lumbar vertebrae. The focus of this research is centralized on the presence of numerical variations in the vertebral column such as eleven …

The Osteobiography Of Human Remains From The Seaview And Indian Town Trail Archaeological Sites, Maggie M. Klemm

Department of Anthropology: Theses and Student Research

Extensive site surveys and excavations on the Island of Barbuda led by Sophia Perdikaris have identified over 62 sites spanning from the Archaic time period to Historic times. Over the last 18 years, these multidisciplinary teams have focused on mapping all sites and performing rescue excavations on sites threatened by sea level rise, erosion or development. Two such sites are the Saladoid site of Seaview (BA016) and the Troumassoid site of Indian Town Trail (BA01). The dunes surrounding the site of Seaview receive the brunt of storms and hurricanes. In 1998 hurricane Georges exposed skeletal material now part of the …

The Kruger Collection Reimagined: A Case Study In 3d Scanning And Interactive Exhibit Design, Annissa Davis

Department of Anthropology: Theses and Student Research

This thesis examines the use of 3D modeling in museum exhibition to create exploratory exhibits that facilitate unique relationships between the visitors and the collection beyond what is provided by the collection’s in person counterparts. Typical use of 3D modeling in museums is currently often representative rather than exploratory. By employing a Digital Humanities lens to approach the development of a digital exhibition utilizing 3D technology and interactive elements created in a video game engine (Unity), this thesis project evaluates these potential new relationships. Using the Eloise Kruger Collection of Miniatures as a case study, the following text details the …

A Manual On The Planning And Integration Of Archaeological Methods In To Outdoor Forensic Search Investigations, Jonathan Robert Garcia

Department of Anthropology: Theses and Student Research

As archaeology and its applications into forensic contexts develop into the growing discipline of forensic archaeology, an increasing amount of literature has resulted stemming from research on the integration of common archaeological methods. However, much of this literature is intended for professional archaeologists or forensic anthropologists who are well experienced in their respective disciplines. Emerging literature generally does not consider those who leads efforts at forensic scenes in the outdoors such as law enforcement officers who often lack a background in archaeology or forensic anthropology. This thesis seeks to resolve this dilemma by creating a new and accessible manual. The …

An Autosomal Recessive Variant In Pygm Causes Myophosphorylase Deficiency In Red Angus Composite Cattle, Mackenzie Batt, Leila G. Venzor, Keri Gardner, Rachel R. Reith, Kelsey A. Roberts, Nicolas J. Herrera, Anna M. Fuller, Gary Sullivan, J. Travis Mulliniks, Matthew L. Spangler, Stephanie J. Valberg, David J. Steffen, Jessica Lynn Petersen

Department of Animal Science: Faculty Publications

Background Between 2020 and 2022, eight calves in a Nebraska herd (composite Simmental, Red Angus, Gelbvieh) displayed exercise intolerance during forced activity. In some cases, the calves collapsed and did not recover. Available sire pedigrees contained a paternal ancestor within 2–4 generations in all affected calves. Pedigrees of the calves’ dams were unavailable, however, the cows were ranch-raised and retained from prior breeding seasons, where bulls used for breeding occasionally had a common ancestor. Therefore, it was hypothesized that a de novo autosomal recessive variant was causative of exercise intolerance in these calves.

Results A genome-wide association analysis utilizing SNP …

Linking Reactive Nitrogen Species Within The Vadose Zone With Surface Irrigation, Kaitlyn Richards

Honors Program: Senior Projects (Public)

This study investigated the relationship between irrigation methods and the mobilization of nitrogen in the vadose zone, focusing on soil properties, water dynamics, and nitrogen species distribution. Data collected from dryland and pivot-irrigated soil cores reveal distinct patterns in water content, bulk density, soil texture, pH, conductivity, and nitrogen concentrations. Results indicated that water content has a major influence in nitrogen availability and microbial activity. Nitrate-N and ammonium-N concentrations varied between dryland and pivot soils, with notable disparities observed. In dryland soils, nitrate-N concentrations varied widely across depth intervals, with notable accumulation in deeper layers, while ammonium-N concentrations exhibited a …

Overexpression Of Msdreb1c Modulates Growth And Improves Forage Quality In Tetraploid Alfalfa (Medicago Sativa L.), Yangyang Zhang, Zhen Wang, Fan Zhang, Xue Wang, Yajing Li, Ruicai Long, Mingna Li, Xianyang Li, Quanzhen Wang, Qingchuan Yang, Junmei Kang

Department of Agronomy and Horticulture: Faculty Publications

DREB has been reported to be involved in plant growth and response to environmental factors. However, the function of DREB in growth and development has not been elucidated in alfalfa (Medicago sativa L.), a perennial tetraploid forage cultivated worldwide. In this study, an ortholog of MtDREB1C was characterized from alfalfa and named MsDREB1C accordingly. MsDREB1C was significantly induced by abiotic stress. The transcription factor MsDREB1C resided in the nucleus and had self-transactivation activity. The MsDREB1C overexpression (OE) alfalfa displayed growth retardation under both long-day and short-day conditions, which was supported by decreased MsGA20ox and upregulated MsGA2ox in the OE …

Genetic Diversity Of United States Rambouillet, Katahdin And Dorper Sheep, Gabrielle M. Becker, Jacob W. Thorne, Joan M. Burke, Ronald M. Lewis, David R. Notter, James L. M. Morgan, Christopher S. Schauer, Whit C. Stewart, R. R. Redden, Brenda M. Murdoch

Department of Animal Science: Faculty Publications

Background Managing genetic diversity is critically important for maintaining species fitness. Excessive homozygosity caused by the loss of genetic diversity can have detrimental effects on the reproduction and production performance of a breed. Analysis of genetic diversity can facilitate the identification of signatures of selection which may contribute to the specific characteristics regarding the health, production and physical appearance of a breed or population. In this study, breeds with well-characterized traits such as fine wool production (Rambouillet, N = 745), parasite resistance (Katahdin, N = 581) and environmental hardiness (Dorper, N = 265) were evaluated for inbreeding, effective population size …

Overall And Sex-Specific Associations Of Serum Lipid-Soluble Micronutrients With Metabolic Dysfunction-Associated Steatotic Liver Disease Among Adults In The United States, Weiwen Chai, Meng-Hua Tao

Department of Nutrition and Health Sciences: Faculty Publications

This study examined overall and sex-specific associations of serum lipid-soluble micronutrients including α- and γ-tocopherols, 25-hydroxy-vitamin D (25(OH)D), retinol, and six major carotenoids with metabolic dysfunction-associated steatotic lever disease (MASLD) using the 2017–2018 National Health and Nutrition Examination Survey. This analysis included 3956 adults (1991 men, 1965 women) aged ≥ 20 years. Steatotic liver disease was determined through transient elastography examination. Odds ratios (ORs) and 95% confidence intervals (95% CIs) for MASLD associated with micronutrients were estimated using logistic regressions. Higher serum α-tocopherol (highest vs. lowest quartile: OR = 1.53, 95% CI = 1.05–2.22, p = 0.03) and γ-tocopherol (highest …

Road To A Chemistry-Specific Data Management Plan, Daniela Adele Hausen, Ann-Christin Andres, Jochen Ortmeyer, Sonja Herres-Pawlis

Copyright, Fair Use, Scholarly Communication, etc.

In order to develop a discipline-specific data management plan (DMP) template, it is important to obtain information from researchers. For a chemistry-specific template, NFDI4Chem conducted a series of interviews with 27 participants and used data from the RDA WG Discipline-specific Guidance for DMP online survey.

The interviews showed that the implementation of research data management in everyday work is a big challenge. Key findings from the interview series highlight challenges in implementing FAIR principles, with a focus on “Findability” and “Reusability.” The importance of linking physical samples and data in chemistry is emphasised, with discussions on storage, archiving, and the …

Injectable And Rapidly Expandable Thrombin-Decorated Cryogels Achieve Rapid Hemostasis And High Survival Rates In A Swine Model Of Lethal Junctional Hemorrhage, Syed Muntazir Andrabi, S.M. Shatil Shahriar, Al-Murtadha Al-Gahmi, Benjamin L. Wilczewski, Mark A. Carlson, Jingwei Xie

Department of Mechanical and Materials Engineering: Faculty Publications

Effective therapies are urgently needed to stabilize patients with marginally compressible junctional hemorrhage long enough to get them to the hospital alive. Herein, we report injectable and rapidly expandable cryogels consisting of polyacrylamide and thrombin (AT cryogels) created by cryo-polymerization for the efficient management of lethal junctional hemorrhage in swine. The produced cryogels have small pore sizes and highly interconnected porous architecture with robust mechanical strength. The cryogels exhibit rapid shape memory properties and prove to be resilient against fatigue. These cryogels also show high water/blood absorption capacity, fast blood clotting effect, and enhanced adhesion of red blood cells and …

Evaluating Consistency Across Multiple Neospectra (Compact Fourier Transform Near-Infrared) Spectrometers For Estimating Common Soil Properties, Sadia M. Mitu, Colleen Smith, Jonathan Sanderman, Richard R. Ferguson, Keith Shepherd, Yufeng Ge

Department of Agronomy and Horticulture: Faculty Publications

Rapid and cost-effective techniques for soil analysis are essential to guide sustainable land management and production agriculture. This study aimed at evaluating the performance and consistency of portable handheld Fourier-transform near-infrared spectrometers and the NeoSpectra scanners in estimating 12 common soil physical and chemical properties including pH; organic carbon (OC); inorganic carbon (IC); total nitrogen (TN); cation exchange capacity (CEC); clay, silt, and sand fractions; and exchangeable potassium (K), phosphorus (P), calcium (Ca), and magnesium (Mg). A diverse set of samples (n = 600) were retrieved from a national-scale soil archive of the Kellogg Soil Survey Laboratory of USDA-NRCS …

Scalable Relational Analysis Via Relational Bound Propagation, Clay Stevens, Hamid Bagheri

School of Computing: Faculty Publications

Bounded formal analysis techniques (such as bounded model checking) are incredibly powerful tools for today’s software engineers. However, such techniques often suffer from scalability challenges when applied to large-scale, real-world systems. It can be very difficult to ensure the bounds are set properly, which can have a profound impact on the performance and scalability of any bounded formal analysis. In this paper, we propose a novel approach—relational bound propagation—which leverages the semantics of the underlying relational logic formula encoded by the specification to automatically tighten the bounds for any relational specification. Our approach applies two sets of semantic rules to …

Data-Driven Evidence-Based Syntactic Sugar Design, David Obrien, Robert Dyer, Tien N. Nguyen, Hridesh Rajan

School of Computing: Faculty Publications

Programming languages are essential tools for developers, and their evolution plays a crucial role in supporting the activities of developers. One instance of programming language evolution is the introduction of syntactic sugars, which are additional syntax elements that provide alternative, more readable code constructs. However, the process of designing and evolving a programming language has traditionally been guided by anecdotal experiences and intuition. Recent advances in tools and methodologies for mining open-source repositories have enabled developers to make datadriven software engineering decisions. In light of this, this paper proposes an approach for motivating data-driven programming evolution by applying frequent subgraph …

Stress Phenotyping Analysis Leveraging Autofluorescence Image Sequences With Machine Learning, Sruti Das Choudhury, Carmela Rosaria Guadagno, Srinidhi Bashyam, Anastasios Mazis, Brent E. Ewers, Ashok Samal, Tala Awada

School of Natural Resources: Faculty Publications

Background: Autofluorescence-based imaging has the potential to nondestructively characterize the biochemical and physiological properties of plants regulated by genotypes using optical properties of the tissue. A comparative study of stress tolerant and stress susceptible genotypes of Brassica rapa with respect to newly introduced stress-based phenotypes using machine learning techniques will contribute to the significant advancement of autofluorescence-based plant phenotyping research.

Methods: Autofluorescence spectral images have been used to design a stress detection classifier with two classes, stressed and non-stressed, using machine learning algorithms. The benchmark dataset consisted of time-series image sequences from three Brassica rapa genotypes (CC …

Post-Translational Regulation Of A Bidomain Glycerol-3-Phosphate Dehydrogenase Catalyzing Glycerol Synthesis Under Salinity Stress In Chlamydomonas Reinhardtii, Itzela Cruz-Powell, Binita Subedi, Yeongho Kim, Daniela Morales-Sánchez, Heriberto D. Cerutti

Center for Plant Science Innovation: Faculty Publications

Core chlorophytes possess glycerol-3-phosphate dehydrogenases (GPDs) with an unusual bidomain structure, consisting of a glycerol-3-phosphate phosphatase (GPP) domain fused to canonical GPD domains. These plastid-localized enzymes have been implicated in stress responses, being required for the synthesis of glycerol under high salinity and triacylglycerols under nutrient deprivation. However, their regulation under varying environmental conditions is poorly understood. C. reinhardtii transgenic strains expressing constitutively bidomain GPD2 did not accumulate glycerol or triacylglycerols in the absence of any environmental stress. Although the glycerol contents of both wild type and transgenic strains increased significantly upon exposure to high salinity, cycloheximide, an inhibitor of …

Accurate Measurement Of Field Size Is Essential For Analysis Of Smallholder Survey Data, Rica Joy Flor, Shen Yuan, Gonzalo Rizzo, Fahmuddin Agus, Anny Ruth P. Pame, Akhara Ouk, Rathmuny Then, Sokheng Keo, Virender Kumar, Particio Grassini

Department of Agronomy and Horticulture: Faculty Publications

Context: Agronomic surveys play a vital role in identifying on-farm yield constraints and opportunities to increase productivity, input-use efficiency, and farmer profit. These surveys typically rely on farmer-reported data, where crop yield and applied inputs per hectare are estimated based on farmer-reported total harvested output and applied inputs per field and associated field size. At question is how accurate field size is, which is vital in the case of smallholders as small inaccuracies can lead to large biases in estimated yield and inputs.

Objectives: The goals of this study are to assess current approaches to determine field size …