Digital Commons Network^™

Characterization Of The Burkholderia Thailandensis Sos Response By Using Whole-Transcriptome Shotgun Sequencing, Ricky L. Ulrich, David Deshazer, Tara A. Kenny, Melanie P. Ulrich, Anna Moravusova, Timonthy Opperman, Sina Bavari, Terry L. Bowlin, Donald T. Molr, Rekha G. Panchal

United States Army: Publications

The bacterial SOS response is a well-characterized regulatory network encoded by most prokaryotic bacterial species and is involved in DNA repair. In addition to nucleic acid repair, the SOS response is involved in pathogenicity, stress-induced mutagenesis, and the emergence and dissemination of antibiotic resistance. Using high-throughput sequencing technology (SOLiD RNASeq), we analyzed the Burkholderia thailandensis global SOS response to the fluoroquinolone antibiotic, ciprofloxacin (CIP), and the DNA-damaging chemical, mitomycin C (MMC). We demonstrate that a B. thailandensis recA mutant (RU0643) is approximately 4- fold more sensitive to CIP in contrast to the parental strain B. thailandensis DW503. Our RNA-Seq results …

Bacterial Peritonitis Due To Acinetobacter Baumannii Sequence Type 25 With Plasmid-Borne New Delhi Metallo-Beta-Lactamase In Honduras, Paige E. Waterman, Patrick Mcgann, Erik Snesrud, Robert J. Clifford, Yoon I. Kwak, Ivon P. Munoz-Urbizo, Juana Tabora-Castellanos, Michael Milillo, Lan Preston, Ricardo Aviles, Deena E. Sutter, Emil P. Lesho

United States Army: Publications

A carbapenem-resistant Acinetobacter baumannii strain was isolated from the peritoneal fluid of a patient with complicated intra-abdominal infection and evaluated at the Multidrug-resistant Organism Repository and Surveillance Network by wholegenome sequencing and real-time PCR. The isolate was sequence type 25 and susceptible to colistin and minocycline, with low MICs of tigecycline. bla_NDM-1 was located on a plasmid with >99% homology to pNDM-BJ02. The isolate carried numerous other antibiotic resistance genes, including the 16S methylase gene, armA.

Ixodid Ticks Associated With Feral Swine In Texas, David M. Sanders, Anthony L. Schuster, P. Wesley Mccardle, Otto F. Strey, Terry L. Blankenship, Pete D. Teel

United States Army: Publications

Ixodid ticks were collected from feral swine in eight Texas ecoregions from 2008-2011. Sixty-two percent of 806 feral swine were infested with one or more of the following species: Amblyomma americanum, A. cajennense, A. maculatum, Dermacentor albipictus, D. halli, D. variabilis, and Ixodes scapularis. Juvenile and adult feral swine of both sexes were found to serve as host to ixodid ticks. Longitudinal surveys of feral swine at four geographic locations show persistent year-round tick infestations of all gender-age classes for tick species common to their respective geographic locations and …

Los Parásitos Y El Estudio De Su Biodiversidad: Un Enfoque Sobre Los Estimadores De La Riqueza De Especies, Christian E. Bautista-Hernández, Scott Monks, Griselda Pulido-Flores

Estudios científicos en el estado de Hidalgo y zonas aledañas

Durante años los parásitos fueron considerados únicamente como agentes patógenos que debían ser eliminados, sin considerar que son un componente importante de la biodiversidad, que son capaces de aportar información de sí mismos y de otros organismos. Existen estimadores de riqueza que predicen el número de especies para una comunidad a partir de la riqueza observada y de la abundancia de las especies o datos de incidencia; pueden ser estimadores paramétricos y no paramétricos. La comparación de la riqueza de especies entre componente de comunidades de parásitos frecuentemente pueden ser difícil de evaluar debido a que los datos no se …

Worldwide Trends In Fishing Interest Indicated By Internet Search Volume, G . R. Wilde, Kevin L. Pope

Nebraska Cooperative Fish and Wildlife Research Unit: Staff Publications

There is a growing body of literature that shows internet search volume on a topic, such as fishing, is a viable measure of salience. Herein, internet search volume for ‘fishing’ and ‘angling’ is used as a measure of public interest in fishing, in particular, recreational fishing. An online tool, Google Insights for Search, which allows one to study internet search terms and their volume since 2004, is used to examine trends in interest in fishing for 50 countries. Trends in normalised fishing search volume, during 2004 through 2011, varied from a 72.6% decrease (Russian Federation) to a 133.7% increase (Hungary). …

Spatial Distribution Of G6pd Deficiency Variants Across Malaria-Endemic Regions, Rosalind E. Howes, Mewahyu Dewi, Frederic B. Piel, Wuelton M. Monteiro, Katherine E. Battle, Jane P. Messina, Anavaj Sakuntabhai, Thomas N. Williams, J. Kevin Baird, Simon I. Hay

United States Public Health Resources

Background: Primaquine is essential for malaria control and elimination since it is the only available drug preventing multiple clinical attacks by relapses of Plasmodium vivax. It is also the only therapy against the sexual stages of Plasmodium falciparum infectious to mosquitoes, and is thus useful in preventing malaria transmission. However, the difficulties of diagnosing glucose-6-phosphate dehydrogenase deficiency (G6PDd) greatly hinder primaquine’s widespread use, as this common genetic disorder makes patients susceptible to potentially severe and fatal primaquine-induced haemolysis. The risk of such an outcome varies widely among G6PD gene variants.

Methods: A literature review was conducted to identify surveys of …

Suppressive Chemoprophylaxis Invites Avoidable Risk Of Serious Illness Caused By Plasmodium Vivax Malaria, J. Kevin Baird

United States Public Health Resources

Despite inadequacy in preventing vivax malaria after travel, suppressive chemoprophylaxis has dominated travel medicine strategy since the advent of chloroquine in 1946. The lethal threat of falciparum malaria versus the perceived benign consequence of vivax malaria underpins this strategic posture. Recent evidence demonstrating vivax malaria as often pernicious should prompt reconsideration of that posture. Causal prophylaxis kills early developing forms of plasmodia in the liver, thus preventing attacks of falciparum and vivax malaria during travel and delayed onset vivax malaria following travel. Primaquine is the only available drug for this application, and has good evidence of safety, tolerability and efficacy …

Development And Performance Evaluation Of A Streamlined Method For Nucleic Acid Purification, Denaturation, And Multiplex Detection Of Bluetongue Virus And Epizootic Hemorrhagic Disease Virus, Megan E. Schroeder, Donna J. Johnson, Eileen N. Ostlund, Jennifer Meier, Mangkey A. Bounpheng, Alfonso Clavijo

United States Public Health Resources

Bluetongue virus (BTV) and Epizootic hemorrhagic disease virus (EHDV) possess similar structural and molecular features, are transmitted by biting midges (genus Culicoides), and cause similar diseases in some susceptible ruminants. Generally, BTV causes subclinical disease in cattle, characterized by a prolonged viremia. EHDV-associated disease in cattle is less prominent; however, it has emerged as a major economic threat to the white-tailed deer (Odocoileus virginianus) industry in many areas of the United States. The recent emergence of multiple BTV and EHDV serotypes previously undetected in the United States demonstrates the need for robust detection of all known serotypes …

Animal Health Effects Of The October 2013 Blizzard: Observations, Russ Daly, Ken Olson, Dave Ollila, Dennis Todey, Warren Rusche, Joseph Neary, Dale Miskimins, George Perry

Range Beef Cow Symposium

From Thursday, October 3, through Saturday, October 5, 2013, an unprecedented early season winter storm affected western South Dakota and portions of Wyoming, Montana, North Dakota, and Nebraska. This storm resulted in the deaths of an estimated 15,000 to 30,000 head of cattle, along with many sheep, horses, and other animals. The early occurrence of the storm as well as its severity contributed to direct losses of animals as well as subsequent health effects.

Prevalence And Correlates Of Kaposi’S Sarcoma-Associated Herpesvirus Infection In A Sample Of Men Who Have Sex With Men In Eastern China, T. Zhang, H. Lin, V. Minhas, W. Zhu, Charles Wood, N. He

School of Biological Sciences: Faculty Publications

This study aimed to determine the seroprevalence of Kaposi’s sarcoma-associated herpesvirus (KSHV) and related factors in men who have sex with men (MSM) in China. A total of 208 subjects were recruited from eastern China from 2008 to 2009. Plasma samples were collected and screened for KSHV, HIV and syphilis. Overall, KSHV seroprevalence was 32.7% in the subjects. About 92.7% of subjects reported having ever had anal sex with a man, of whom 67.8% had receptive anal sex and 77.9% had insertive anal sex. About 93.1% of the study participants reported having had oral sex with a man, of whom …

Molecular Architecture Of The Uncleaved Hiv-1 Envelope Glycoprotein Trimer, Youdong Mao, Luis Castillo-Menendez, Liping Wang, Christopher Gu, Alon Herschhorn, Anik Désormeaux, Andrés Finzi, Shi-Hua Xiang, Joseph Sodroski

Nebraska Center for Virology: Faculty Publications

The human immunodeficiency virus (HIV-1) envelope glycoprotein (Env) trimer, a membrane-fusing machine, mediates virus entry into host cells and is the sole virusspecific target for neutralizing antibodies. Binding the receptors, CD4 and CCR5/CXCR4, triggers Env conformational changes from the metastable unliganded state to the fusion-active state. We used cryo-electron microscopy to obtain a 6-Å structure of the membranebound, heavily glycosylated HIV-1 Env trimer in its uncleaved and unliganded state. The spatial organization of secondary structure elements reveals that the unliganded conformations of both gp120 and gp41 subunits differ from those induced by receptor binding. The gp120 trimer association domains, which …

Variations In The Biological Functions Of Hiv-1 Clade C Envelope In A Shiv-Infected Rhesus Macaque During Disease Progression, For Yue Tso, Levon Abrahamyan, Shiu-Lok Hu, Ruth M. Ruprecht, Charles Wood

Nebraska Center for Virology: Faculty Publications

A better understanding of how the biological functions of the HIV-1 envelope (Env) changes during disease progression may aid the design of an efficacious anti-HIV-1 vaccine. Although studies from patient had provided some insights on this issue, the differences in the study cohorts and methodology had make it difficult to reach a consensus of the variations in the HIV-1 Env functions during disease progression. To this end, an animal model that can be infected under controlled environment and reflect the disease course of HIV-1 infection in human will be beneficial. Such an animal model was previously demonstrated by the infection …

Kaposi’S Sarcoma-Associated Herpesvirus Transactivator Rta Induces Cell Cycle Arrest In G0/G1 Phase By Stabilizing And Promoting Nuclear Localization Of P27Kip, Pankaj Kumar, Charles Wood

Nebraska Center for Virology: Faculty Publications

The Kaposi’s sarcoma-associated herpesvirus (KSHV) immediate-early gene, replication, and transcription activator (KRta) is a key viral protein that serves as the master regulator for viral lytic replication. In this study, we investigated the role of K-Rta in cell cycle regulation and found that the expression of K-Rta in doxycycline (Dox)-inducible BJAB cells induced cell cycle arrest in G₀/G₁ phase. Western blot analysis of key cell cycle regulators revealed that K-Rta-mediated cell cycle arrest was associated with a decrease in cyclin A and phosphorylated Rb (pS807/pS811) protein levels, both markers of S phase progression, and an increase in …

Low-Abundance Resistant Mutations In Hiv-1 Subtype C Antiretroviral Therapy-Naïve Individuals As Revealed By Pyrosequencing, Sandra Gonzalez, Damien C. Tully, Clement Gondwe, Charles Wood

Nebraska Center for Virology: Faculty Publications

Given the recent scale-up of antiretroviral therapy (ART) in sub-Saharan Africa, we sought to determine how often and at what levels do drug-resistant mutant variants exist in ART-naïve HIV subtype C infected individuals. Samples from 10 ART-naïve Zambian individuals were subjected to ultra-deep pyrosequencing (UDPS) to characterize the frequency of low-abundance drug resistance mutations in the pol gene. Low-abundance clinically relevant variants were detected for nucleoside reverse transcriptase inhibitors (NRTIs), non-nucleoside reverse transcriptase inhibitors (NNRTIs) and protease inhibitors (PIs) in eight of the ten subjects. Intermediate to high-level resistance was predicted for the majority of NRTIs. Mutations conferring resistance to …

Clade C Hiv-1 Isolates Circulating In Southern Africa Exhibit A Greater Frequency Of Dicysteine Motif-Containing Tat Variants Than Those In Southeast Asia And Cause Increased Neurovirulence, Vasudev R. Rao, Ujjwal Neogi, Joshua S, Talboom, Ligia Padilla, Mustafizur Rahman, Cari Fritz-French, Sandra Gonzalez-Ramirez, Anjali Verma, Charles Wood, Ruth M. Ruprecht, Udaykumar Ranga, Tasnim Azim, Vinayaka R. Prasad

Nebraska Center for Virology: Faculty Publications

Background: HIV-1 Clade C (Subtype C; HIV-1C) is responsible for greater than 50% of infections worldwide. Unlike clade B HIV-1 (Subtype B; HIV-1B), which is known to cause HIV associated dementia (HAD) in approximately 15% to 30% of the infected individuals, HIV-1C has been linked with lower prevalence of HAD (0 to 6%) in India and Ethiopia. However, recent studies report a higher prevalence of HAD in South Africa, Zambia and Botswana, where HIV-1C infections predominate. Therefore, we examined whether Southern African HIV-1C is genetically distinct and investigated its neurovirulence. HIV-1 Tat protein is a viral determinant of neurocognitive dysfunction. …

Global Neuroaids Roundtable, Jeymohan Joseph, Cristian L. Achim, Michael J. Boivin, Bruce J. Brew, David B. Clifford, Deborah A. Colosi, Ronald J. Ellis, Robert K. Heaton, Amadou Gallo-Diop, Igor Grant, Georgette D. Kanmogne, Mahendra Kumar, Scott Letendre, Thomas D. Marcotte, Avindra Nath, Carlos A. Pardo, Robert H. Paul, Lynn Pulliam, Kevin Robertson, Walter Royal Iii, Ned Sacktor, Pasiri Sithinamsuwan, Davey M. Smith, Victor Valcour, Brian Wigdahl, Charles Wood

Nebraska Center for Virology: Faculty Publications

In May 2012, the Division of AIDS Research at the National Institute of Mental Health (NIMH) organized the “Global NeuroAIDS Roundtable” in conjunction with the 11th International Symposium on Neurovirology and the 2012 Conference on HIV in the Nervous System. The meeting was held in New York, NY, USA and brought together NIMH-funded investigators who are currently working on projects related to the neurological complications of AIDS (NeuroAIDS) in Africa, Asia, Eastern Europe, and Latin America in order to provide an opportunity to share their recent findings and discuss the challenges encountered within each country. The major goals of the …

El Uso De Helmintos Parásitos Como Bioindicadores En La Evaluación De La Calidad Del Agua: Lago De Tecocomulco Vs. Laguna De Metztitlán, Hidalgo, México, Scott Monks, Griselda Pulido-Flores, Christian E. Bautista-Hernández, Berenice Alemán-García, Jorge Falcón-Ordaz, Juan Carlos Gaytán-Oyarzún

Estudios científicos en el estado de Hidalgo y zonas aledañas

Como parte integral de la evaluación de la calidad ambiental del estado de Hidalgo, este estudio tiene énfasis en los helmintos parásitos de los peces y su uso como bioindicadores de la calidad de agua en Lago de Tecocomulco y Laguna de Metztitlán. Como parte del estudio, se obtuvieron los parámetros ecológicos de la infección para cada especie. En Lago Tecocomulco se registraron dos especies de digéneos (larvas), Posthodiplostomum sp. y Diplostomum sp. en el cerebro, los ojos y el mesenterio de dos especies de peces nativos de la zona (Chirostoma jordani y Girardinicthys viviparus); un céstodo (larva), …

Helmintos Parásitos De Algunos Roedores (Mammalia: Rodentia) En San Miguel De Allende, Tepeapulco, Hidalgo, México, Griselda Pulido-Flores, Scott Monks, Jorge Falcón-Ordaz

Estudios científicos en el estado de Hidalgo y zonas aledañas

Los helmintos son un componente de la biodiversidad, que proveen información sobre la historia natural de los hospederos, y de las relaciones tróficas. El conocimiento de la diversidad de roedores y sus parásitos en Hidalgo es escaso y puntual. Por la amplia distribución de los roedores, su adaptabilidad a los ambientes modificados y por el riesgo zoonótico que representan, es importante conocer la parasitofauna de estos hospederos. El objetivo del este trabajo fue registrar la helmintofauna de algunos roedores en San Miguel de Allende, Tepeapulco, Hidalgo, México. Entre agosto de 2005 y junio de 2007 se colectaron 19 roedores (12 …

Análisis Morfométrico De Glypthelmins Quieta (Stafford, 1900) Stafford, 1905 (Digenea: Macroderoididae) En La Reserva De La Biosfera Barranca De Metztitlán, Hidalgo, México, Francisco Alemán-Muñoz, Griselda Pulido-Flores, Scott Monks, Jorge Falcón-Ordaz

Estudios científicos en el estado de Hidalgo y zonas aledañas

Se evaluó la variación morfológica de 30 ejemplares adultos de la especie Glypthelmins quieta, parásitos de Lithobates spectabilis en localidad de Metznoxtla, en la Reserva de la biosfera Barranca de Metztitlán, Hidalgo. El objetivo del presente trabajo fue contribuir al conocimiento de la variación morfológica de G. quieta, y evaluar si los caracteres de presencia ausencia de glándulas perifaringeas y forma de las glándulas mediales son validos para la asignación de ejemplares a una especie. Se generó una base de datos morfológicos realizando tres análisis de componentes principales (ACP). El primer ACP se realizó con la totalidad de …

Análisis De Metales Pesados En Un Céstodo De La Familia Dilepididae, Jorge Falcón-Ordaz, Scott Monks, Griselda Pulido-Flores, Claudia Romo-Gómez

Estudios científicos en el estado de Hidalgo y zonas aledañas

La concentración de plomo (Pb), cadmio (Cd), zinc (Zn), níquel (Ni), hierro (Fe) y aluminio (Al) fue determinada en un céstodo de la familia Dilepididae, parásito de Peromyscus difficilis colectados en una zona rural del Estado de México; con respecto a trabajos previos se obtuvieron valores altos de concentración para Pb y Zn mientras que para Ni sus valores estuvieron por debajo de los valores reportados y el Cd no fue registrado, en lo que respecta al Fe y Al no existen registros de estos metales en céstodos parásitos de organismos terrestres. Con los datos registrados en el presente trabajo …

Nemátodos Parásitos De Roedores De Huehuetla, Hidalgo, México, Jorge Falcón-Ordaz, Scott Monks, Griselda Pulido-Flores

Estudios científicos en el estado de Hidalgo y zonas aledañas

El estudio de nemátodos parásitos de roedores en el estado de Hidalgo es prácticamente desconocido, solamente se han registrado para la entidad un total de 17 especies. Es por esto que se llevó a cabo una recolecta de roedores silvestres en el municipio de Huehuetla, Hidalgo, con el objetivo de conocer los helmintos que parasitan dichos hospederos. Los hospederos se capturaron con trampas Sherman para su posterior sacrificio y revisión helmintológica. Se registra por primera vez Syphacia sp. en Peromyscus mexicanus (Saussure, 1860) como nuevo hospedero. Se ratifica la identificación de Trichuris fossor Hall, 1916 y Hassalstrongylus aduncus Chandler, 1932; …

Use Of Ethanol Extract Of Mycobacterium Bovis For Detection Of Specific Antibodies In Sera Of Farmed Red Deer (Cervus Elaphus) With Bovine Tuberculosis, Ashutosh Wadhwa, Rachel E. Johnson, C. G. Mackintosh, J Frank Griffin, W Ray Waters, John Bannantine, Shigetoshi Eda

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Background: Bovine tuberculosis (bTB) in wildlife species poses a threat to domestic livestock in many situations. Control programs for bTB in livestock depend on testing and slaughtering the positive animals; however, the currently available diagnostic tests often have poor specificity. In our previous study, we developed a specific and sensitive enzyme linked immunosorbent assay (ELISA) for another mycobacterial disease – Johne’s disease, using surface antigens of Mycobacterium avium ssp. paratuberculosis (MAP) extracted by briefly agitating the bacilli in 80% ethanol solution. The ELISA test was named ethanol vortex ELISA (EVELISA). The objective of this study is to examine whether EVELISA …

High-Impact Animal Health Research Conducted At The Usda’S National Animal Disease Center, J. P. Bannantine, Steven C. Olsen, Marcus E. Kehrli Jr., Thad B. Stanton, Eduardo Casas, Diana L. Whipple, Kurt A. Zuelke

United States Department of Agriculture-Agricultural Research Service / University of Nebraska-Lincoln: Faculty Publications

Commissioned by President Dwight Eisenhower in 1958 and opened with a dedication ceremony in December 1961, the USDA, Agricultural Research Service (ARS), National Animal Disease Center (NADC) celebrated its 50-year anniversary in November 2011. Over these 50 years, the NADC established itself among the world’s premier animal health research centers. Its historic mission has been to conduct basic and applied research on selected endemic diseases of economic importance to the U.S. livestock and poultry industries. Research from NADC has impacted control or management efforts on nearly every major animal disease in the United States since 1961. For example, diagnostic tests …

Modeling Social Transmission Dynamics Of Unhealthy Behaviors For Evaluating Prevention And Treatment Interventions On Childhood Obesity, Leah M. Frerichs, Ozgur M. Araz, Terry T.-K. Huang

Department of Supply Chain Management and Analytics: Faculty Publications

Research evidence indicates that obesity has spread through social networks, but lever points for interventions based on overlapping networks are not well studied. The objective of our research was to construct and parameterize a system dynamics model of the social transmission of behaviors through adult and youth influence in order to explore hypotheses and identify plausible lever points for future childhood obesity intervention research. Our objectives were: (1) to assess the sensitivity of childhood overweight and obesity prevalence to peer and adult social transmission rates, and (2) to test the effect of combinations of prevention and treatment interventions on the …

Multilocus Sequence Typing For Characterization Of Staphylococcus Pseudintermedius, S. M. Solyman, C. C. Black, B. Duim, V. Perreten, E. Van Duijkeren, J. A. Wagenaar, L. C. Eberlein, L. N. Sadeghi, R. Videla, D. A. Bemis, S. A. Kania

United States Army: Publications

Staphylococcus pseudintermedius is an opportunistic pathogen in dogs. Four housekeeping genes with allelic polymorphisms were identified and used to develop an expanded multilocus sequence typing (MLST) scheme. The new seven-locus technique shows S. pseudintermedius to have greater genetic diversity than previous methods and discriminates more isolates based upon host origin.

Unique Structural Modifications Are Present In The Lipopolysaccharide From Colistin-Resistant Strains Of Acinetobacter Baumannii, Mark R. Pelletier, Leila G. Casella, Jace W. Jones, Mark D. Adams, Daniel V. Zurawski, Karsten R. O. Hazlett, Yohei Doi, Robert K. Ernst

United States Army: Publications

Acinetobacter baumannii is a nosocomial opportunistic pathogen that can cause severe infections, including hospital-acquired pneumonia, wound infections, and sepsis. Multidrug-resistant (MDR) strains are prevalent, further complicating patient treatment. Due to the increase in MDR strains, the cationic antimicrobial peptide colistin has been used to treat A. baumannii infections. Colistin-resistant strains of A. baumannii with alterations to the lipid A component of lipopolysaccharide (LPS) have been reported; specifically, the lipid A structure was shown to be hepta-acylated with a phosphoethanolamine (pEtN) modification present on one of the terminal phosphate residues. Using a tandem mass spectrometry platform, we provide definitive evidence that …

Comparison Of Pcr And Quantitative Real-Time Pcr Methods For The Characterization Of Ruminant And Cattle Fecal Pollution Sources, Meredith R. Raith, Catherine A. Kelty, John F. Griffith, Alexander Schriewer, Stefan Wuertz, Sophie Mieszkin, Michele Gourmelon, Georg H. Reischer, Andreas H. Farnleitner, Jared S. Ervin, Patricia A. Holden, Darcy L. Ebentier, Jennifer A. Jay, Dan Wang, Alexandria B. Boehm, Tiong Gim Aw, Joan B. Rose, E. Balleste, W.G. Meijer, Mano Sivaganesan, Orin C. Shanks

United States Environmental Protection Agency: Publications

The State of California has mandated the preparation of a guidance document on the application of fecal source identification methods for recreational water quality management. California contains the fifth highest population of cattle in the United States, making the inclusion of cow-associated methods a logical choice. Because the performance of these methods has been shown to change based on geography and/or local animal feeding practices, laboratory comparisons are needed to determine which assays are best suited for implementation. We describe the performance characterization of two end-point PCR assays (CF128 and CF193) and five real-time quantitative PCR (qPCR) assays (Rum2Bac, BacR, …

Impacts Of Migratory Sandhill Cranes (Grus Canadensis) On Microbial Water Quality In The Central Platte River, Nebraska, Usa, Jason R. Vogel, Dale W. Griffin, Hon S. Ip, Nicholas J. Ashbolt, Matthew T. Moser, Jingrang Lu, Mary K. Beitz, Hodon Ryu, Jorge W. Santo Domingo

United States Geological Survey: Staff Publications

Wild birds have been shown to be significant sources of numerous types of pathogens that are relevant to humans and agriculture. The presence of large numbers of migratory birds in such a sensitive and important ecosystem as the Platte River in central Nebraska, USA, could potentially serve a significant source of birdderived pathogens in the water/sediment and riverine environment. In 2009 and 2010, a study was completed to investigate the potential water-quality impacts of Sandhill Cranes and Snow Geese on the microbial water quality of the central Platte River during their spring migration period. Fecal material, river-bottom sediment, and water …

Scrub Typhus With Sepsis And Acute Respiratory Distress Syndrome, Asok Kurup, Aneesh Issac, Jin Phang Loh, Too Bou Lee, Robert Chua, Pradeep Bist, Chien-Chung Chao, Michael Lewis, Duane J. Gubler, Wei Mei Ching, Eng Eong Ooi, Bindu Sukumaran

United States Navy: Publications

Scrub typhus is a major infectious threat in the Asia-Pacific region. We report an unusual case of scrub typhus in a patient in Singapore who presented with sepsis and acute respiratory distress syndrome but lacked the pathognomonic eschar. The patient recovered after appropriate diagnosis and doxycycline treatment. Rickettsial diseases should be included in the differential diagnosis of febrile illnesses in regions where the diseases are endemic, and absence of eschar should not be the criterion used to rule out scrub typhus.

Identification Of BlaOxa-51-Like, BlaOxa-58, BlaDim-1, And BlaVim Carbapenemase Genes In Hospital Enterobacteriaceae Isolates From Sierra Leone, Tomasz A. Leski, Umaru Bangura, David H. Jimmy, Rashid Ansumana, Stephen E. Lizewski, Robert W. Li, David A. Stenger, Chris R. Taitt, Gary J. Vora

United States Navy: Publications

We describe the results of a molecular epidemiological survey of 15 carbapenemase-encoding genes from a recent collection of clinical isolates from Mercy Hospital in Bo, Sierra Leone. The most salient findings revealed that (i) 60% of the isolates harbored multiple carbapenemase genes; (ii) the bla_DIM-1 gene, which has previously only been reported in The Netherlands, is also circulating in this environment; and (iii) bla_OXA-51-like and bla_OXA-58 genes, which were thought to reside exclusively in Acinetobacter species, can also be found in members of the Enterobacteriaceae.