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Soil Fauna Accelerate Dung Pat Decomposition And Nutrient Cycling Into Grassland Soil, Kenneth S. Evans, Martha Mamo, Ana Wingeyer, Walter Schacht, Kent Eskridge, Jeff Bradshaw, Daniel Ginting Jan 2019

Soil Fauna Accelerate Dung Pat Decomposition And Nutrient Cycling Into Grassland Soil, Kenneth S. Evans, Martha Mamo, Ana Wingeyer, Walter Schacht, Kent Eskridge, Jeff Bradshaw, Daniel Ginting

Department of Agronomy and Horticulture: Faculty Publications

Soil fauna play critical roles in various ecosystem functions and services, but empirical data measuring their impact on dung pat decomposition and subsequent nutrient cycling into rangeland soils are limited. The objective of this study was to quantify the effect of soil fauna, using dung beetle as an indicator, on dung decomposition and subsequent translocation of dung nutrients into grassland soil over time. A field experiment was conducted early in the summer season and late in the summer season of 2014 and 2015. In each season, dung beetle abundance, changes in dung properties, and subsequent translocation of dung nutrients into …


The Mitochondrial Genome Of Eleusine Indica And Characterization Of Gene Content Within Poaceae, Nathan D. Hall, Hui Zhang, Jeffrey P. Mower, Joseph Scott Mcelroy, Leslie R. Goertzen Jan 2019

The Mitochondrial Genome Of Eleusine Indica And Characterization Of Gene Content Within Poaceae, Nathan D. Hall, Hui Zhang, Jeffrey P. Mower, Joseph Scott Mcelroy, Leslie R. Goertzen

Department of Agronomy and Horticulture: Faculty Publications

Plant mitochondrial (mt) genome assembly provides baseline data on size, structure, and gene content, but resolving the sequence of these large and complex organelle genomes remains challenging due to fragmentation, frequent recombination, and transfers of DNA from neighboring plastids. Themt genome for Eleusine indica (Poaceae: goosegrass) is comprehensibly analyzed here, providing key reference data for an economically significant invasive species that is also the maternal parent of the allotetraploid crop Finger millet (Eleusine coracana). The assembled E. indica genome contains 33 protein coding genes, 6 rRNA subunits, 24 tRNA, 8 large repetitive regions 15 kb of transposable elements across a …


Engineering Linear, Branched-Chain Triterpene Metabolism In Monocots, Chase Kempinski, Zuodong Jiang, Garrett Zinck, Shirley J. Sato, Zhengxiang Ge, Thomas E. Clemente, Joseph Chappell Jan 2019

Engineering Linear, Branched-Chain Triterpene Metabolism In Monocots, Chase Kempinski, Zuodong Jiang, Garrett Zinck, Shirley J. Sato, Zhengxiang Ge, Thomas E. Clemente, Joseph Chappell

Department of Agronomy and Horticulture: Faculty Publications

Triterpenes are thirty-carbon compounds derived from the universal five-carbon prenyl precursors isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Normally, triterpenes are synthesized via the mevalonate (MVA) pathway operating in the cytoplasm of eukaryotes where DMAPP is condensed with two IPPs to yield farnesyl diphosphate (FPP), catalyzed by FPP synthase (FPS). Squalene synthase (SQS) condenses two molecules of FPP to generate the symmetrical product squalene, the first committed precursor to sterols and most other triterpenes. In the green algae Botryococcus braunii, two FPP molecules can also be condensed in an asymmetric manner yielding the more highly branched triterpene, botryococcene. Botryococcene …


Response Surface Analysis Of Genomic Prediction Accuracy Values Using Quality Control Covariates In Soybean, Diego Jarquin, Reka Howard, George L. Graef, Aaron Lorenz Jan 2019

Response Surface Analysis Of Genomic Prediction Accuracy Values Using Quality Control Covariates In Soybean, Diego Jarquin, Reka Howard, George L. Graef, Aaron Lorenz

Department of Agronomy and Horticulture: Faculty Publications

An important and broadly used tool for selection purposes and to increase yield and genetic gain in plant breeding programs is genomic prediction (GP). Genomic prediction is a technique where molecular marker information and phenotypic data are used to predict the phenotype (eg, yield) of individuals for which only marker data are available. Higher prediction accuracy can be achieved not only by using efficient models but also by using quality molecular marker and phenotypic data. The steps of a typical quality control (QC) of marker data include the elimination of markers with certain level of minor allele frequency (MAF) and …


Cover Crop Mixture Diversity, Biomass Productivity, Weed Suppression, And Stability, A. M. Florence, Leon G. Higley, R. A. Drijber, Charles A. Francis, John L. Lindquist Jan 2019

Cover Crop Mixture Diversity, Biomass Productivity, Weed Suppression, And Stability, A. M. Florence, Leon G. Higley, R. A. Drijber, Charles A. Francis, John L. Lindquist

Department of Agronomy and Horticulture: Faculty Publications

The diversity-productivity, diversity-invasibility, and diversity-stability hypotheses propose that increasing species diversity should lead, respectively, to increased average biomass productivity, invasion resistance, and stability. We tested these three hypotheses in the context of cover crop mixtures, evaluating the effects of increasing cover crop mixture diversity on above ground biomass, weed suppression, and biomass stability. Twenty to forty cover crop treatments were replicated three or four times at eleven sites using eighteen species representing three cover crop species each from six pre-defined functional groups: cool-season grasses, cool-season legumes, cool-season brassicas, warm-season grasses, warm-season legumes, and warm-season broadleaves. Each species was seeded as …


Developments In Agricultural Soil Quality And Health: Reflections By The Research Committee On Soil Organic Matter Management, Michelle M. Wander, Larry J. Cihacek, Mark Coyne, Rhae A. Drijber, Julie M. Grossman, Jessica L. M. Gutknecht, William R. Horwath, Sindhu Jagadamma, Daniel C. Olk, Matt Ruark, Sieglinde S. Snapp, Lisa K. Tiemann, Ray Well, Ronald F. Turco Jan 2019

Developments In Agricultural Soil Quality And Health: Reflections By The Research Committee On Soil Organic Matter Management, Michelle M. Wander, Larry J. Cihacek, Mark Coyne, Rhae A. Drijber, Julie M. Grossman, Jessica L. M. Gutknecht, William R. Horwath, Sindhu Jagadamma, Daniel C. Olk, Matt Ruark, Sieglinde S. Snapp, Lisa K. Tiemann, Ray Well, Ronald F. Turco

Department of Agronomy and Horticulture: Faculty Publications

The North Central Education and Research Activity Committee (NCERA-59) was formed in 1952 to address how soil organic matter formation and management practices affect soil structure and productivity. It is in this capacity that we comment on the science supporting soil quality and associated soil health assessment for agricultural lands with the goal of hastening progress in this important field. Even though the suite of soil quality indicators being applied by U.S. soil health efforts closely mirrors the “minimum data set” we developed and recommended in the mid-1990s, we question whether the methods or means for their selection and development …


Predicting Soil Wind Erosion Potential Under Different Corn Residue Management Scenarios In The Central Great Plains, M. K. Rakkar, Humberto Blanco-Canqui, J. Tatarko Jan 2019

Predicting Soil Wind Erosion Potential Under Different Corn Residue Management Scenarios In The Central Great Plains, M. K. Rakkar, Humberto Blanco-Canqui, J. Tatarko

Department of Agronomy and Horticulture: Faculty Publications

Various models and simplified equations are available to predict wind erosion potential. However, their performance can be often site-specific, depending on soil characteristics and agronomic practices, warranting sitespecific model validations. Thus, in this study, we 1) validated the wind erodible fraction (WEF) predictive equations by Fryrear et al. (1994) and López et al. (2007) and 2) estimated the total soil loss with the Singleevent Wind Erosion Evaluation Program (SWEEP) using 3-yr measured data from six experiments located across a precipitation gradient in the central Great Plains. Each site had three corn (Zea mays L.) residue removal treatments: control (no …


Joint Use Of Genome, Pedigree, And Their Interaction With Environment For Predicting The Performance Of Wheat Lines In New Environments, Réka Howard, Daniel Gianola, Osval Montesinos-Lopez, Philomin Juliana, Ravi Singh, Jesse Poland, Sandesh Shrestha, Paulino Pérez-Rodriguez, José Crossa, Diego Jarquin Jan 2019

Joint Use Of Genome, Pedigree, And Their Interaction With Environment For Predicting The Performance Of Wheat Lines In New Environments, Réka Howard, Daniel Gianola, Osval Montesinos-Lopez, Philomin Juliana, Ravi Singh, Jesse Poland, Sandesh Shrestha, Paulino Pérez-Rodriguez, José Crossa, Diego Jarquin

Department of Agronomy and Horticulture: Faculty Publications

Genome-enabled prediction plays an essential role in wheat breeding because it has the potential to increase the rate of genetic gain relative to traditional phenotypic and pedigree-based selection. Since the performance of wheat lines is highly influenced by environmental stimuli, it is important to accurately model the environment and its interaction with genetic factors in prediction models. Arguably, multi-environmental best linear unbiased prediction (BLUP) may deliver better prediction performance than single-environment genomic BLUP. We evaluated pedigree and genome-based prediction using 35,403 wheat lines from the Global Wheat Breeding Program of the International Maize and Wheat Improvement Center (CIMMYT). We implemented …


A World Of Cobenefits: Solving The Global Nitrogen Challenge, Benjamin Z. Houlton, Maya Almaraz, Viney Aneja, Amy T. Austin, Edith Bai, Kenneth G. Cassman, Jana E. Compton, Eric A. Davidson, Jan Willem Erisman, James N. Galloway, Baojing Gu, Guolin Yao, Luiz A. Martinelli, Kate Scow, William H. Schlesinger, Thomas P. Tomich, Chao Wang, Xin Zhang Jan 2019

A World Of Cobenefits: Solving The Global Nitrogen Challenge, Benjamin Z. Houlton, Maya Almaraz, Viney Aneja, Amy T. Austin, Edith Bai, Kenneth G. Cassman, Jana E. Compton, Eric A. Davidson, Jan Willem Erisman, James N. Galloway, Baojing Gu, Guolin Yao, Luiz A. Martinelli, Kate Scow, William H. Schlesinger, Thomas P. Tomich, Chao Wang, Xin Zhang

Department of Agronomy and Horticulture: Faculty Publications

Nitrogen is a critical component of the economy, food security, and planetary health. Many of the world's sustainability targets hinge on global nitrogen solutions, which, in turn, contribute lasting benefits for (i) world hunger; (ii) soil, air, and water quality; (iii) climate change mitigation; and (iv) biodiversity conservation. Balancing the projected rise in agricultural nitrogen demands while achieving these 21st century ideals will require policies to coordinate solutions among technologies, consumer choice, and socioeconomic transformation.


History Of Grass Breeding For Grazing Lands In The Northern Great Plains Of The Usa And Canada, Kenneth P. Vogel, John Hendrickson Jan 2019

History Of Grass Breeding For Grazing Lands In The Northern Great Plains Of The Usa And Canada, Kenneth P. Vogel, John Hendrickson

Department of Agronomy and Horticulture: Faculty Publications

• In the early 1930s there were millions of acres of extensively degraded grazing lands and abandoned and eroded cropland in the Northern Plains of the United States and Canada.

• Grass breeding and plant materials programs were established by both the US and Canadian governments and cooperating universities to develop revegetation materials.

• Efforts of a small number of research locations and people resulted in grass cultivars or varieties that were used to revegetate and preserve the soil on millions of acres of land.

• This is a brief history of the people, agencies, and universities that developed these …


Context-Specific Genomic Selection Strategies Outperform Phenotypic Selection For Soybean Quantitative Traits In The Progeny Row Stage, Christopher J. Smallwood, Arnold M. Saxton, Jason D. Gillman, Hem S. Bhandari, Phillip A. Wadl, Benjamin D. Fallen, David L. Hyten, Qijian Song, Vincent R. Pantalone Jan 2019

Context-Specific Genomic Selection Strategies Outperform Phenotypic Selection For Soybean Quantitative Traits In The Progeny Row Stage, Christopher J. Smallwood, Arnold M. Saxton, Jason D. Gillman, Hem S. Bhandari, Phillip A. Wadl, Benjamin D. Fallen, David L. Hyten, Qijian Song, Vincent R. Pantalone

Department of Agronomy and Horticulture: Faculty Publications

Evaluating different breeding selection strategies for relative utility is necessary to choose those that maximize efficiency. Soybean [Glycine max (L.) Merr.] seed yield and fatty acid, protein, and oil contents are all commercially important traits that display complex quantitative inheritance. A soybean population consisting of 860 F5–derived recombinant inbred lines (RILs), genotyped with 4867 polymorphic single nucleotide polymorphism (SNPs) was used to compare phenotypic and context specific genomic selection (GS) strategies. To simulate progeny rows, each RIL was grown in a single plot in 2010 in Knoxville, TN, and phenotype was recorded. A subset of 276 RILs …


Predicting Longitudinal Traits Derived From High-Throughput Phenomics In Contrasting Environments Using Genomic Legendre Polynomials And B-Splines, Mehdi Momen, Malachy T. Campbell, Harkamal Walia, Gota Morota Jan 2019

Predicting Longitudinal Traits Derived From High-Throughput Phenomics In Contrasting Environments Using Genomic Legendre Polynomials And B-Splines, Mehdi Momen, Malachy T. Campbell, Harkamal Walia, Gota Morota

Department of Agronomy and Horticulture: Faculty Publications

Recent advancements in phenomics coupled with increased output from sequencing technologies can create the platform needed to rapidly increase abiotic stress tolerance of crops, which increasingly face productivity challenges due to climate change. In particular, high-throughput phenotyping (HTP) enables researchers to generate large-scale data with temporal resolution. Recently, a random regression model (RRM) was used to model a longitudinal rice projected shoot area (PSA) dataset in an optimal growth environment. However, the utility of RRM is still unknown for phenotypic trajectories obtained from stress environments. Here, we sought to apply RRM to forecast the rice PSA in control and water-limited …


Shifting Avian Spatial Regimes In A Changing Climate, Caleb P. Roberts, Craig R. Allen, David G. Angeler, Dirac Twidwell Jan 2019

Shifting Avian Spatial Regimes In A Changing Climate, Caleb P. Roberts, Craig R. Allen, David G. Angeler, Dirac Twidwell

Department of Agronomy and Horticulture: Faculty Publications

In the present era of rapid global change, development of early warnings of ecological regime shifts is a major focus in ecology. Identifying and tracking shifts in spatial regimes is a new approach with potential to enhance understanding of ecological responses to global change. Here, we show strong directional non-stationarity of spatial regimes identified by avian community body mass data. We do this by tracking 46 years of avian spatial regime movement in the North American Great Plains. The northernmost spatial regime boundary moved >590 km northward, and the southernmost boundary moved >260 km northward. Tracking spatial regimes affords decadal …


Black Bear Use Of Forest Roads In Western Washington, Gary W. Witmer Jan 2019

Black Bear Use Of Forest Roads In Western Washington, Gary W. Witmer

United States Department of Agriculture Wildlife Services: Staff Publications

Radiolocations (108) of 20 black bears were used to assess use or avoidance of 3 forest road types in western Washington. Distances of bears to each type of road were compared to distances of 108 random points using t-tests. Females and males avoided 2-lane roads, while only males avoided 1-lane roads, the most common road type in the area. Females, but not males, were located closer to overgrown, spur roads than expected. This road type has substantial cover of grasses, forbs, and berry-producing shrubs along with protective tree cover. This situation may provide easy travel for females along with security …


No Detection Of Brodifacoum Residues In The Marine And Terrestrial Food Web Three Years After Rat Eradication At Palmyra Atoll, Central Pacific, A. Wegmann, G. Howald, S. Kropidlowski, N. Holmes, A.B. Shiels Jan 2019

No Detection Of Brodifacoum Residues In The Marine And Terrestrial Food Web Three Years After Rat Eradication At Palmyra Atoll, Central Pacific, A. Wegmann, G. Howald, S. Kropidlowski, N. Holmes, A.B. Shiels

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive alien species represent one of the greatest threats to native plants and animals on islands. Rats (Rattus spp.) have invaded most of the world’s oceanic islands, causing lasting or irreversible damage to ecosystems and biodiversity. To counter this threat, techniques to eradicate invasive rats from islands have been developed and applied across the globe. Eradication of alien rats from large or complex island ecosystems has only been successful with the use of bait containing a rodenticide. While effective at eradicating rats from islands, rodenticide can persist in the ecosystem longer than the time required to eradicate the target rat …


Home Range And Habitat Use Of West Virginia Canis Latrans (Coyote), Lauren M. Mastro, Dana J. Morin, Eric M. Gese Jan 2019

Home Range And Habitat Use Of West Virginia Canis Latrans (Coyote), Lauren M. Mastro, Dana J. Morin, Eric M. Gese

United States Department of Agriculture Wildlife Services: Staff Publications

Canis latrans (Coyote) has undergone a range expansion in the United States over the last century. As a highly opportunistic species, its home range and habitat use changes with ecological context. Coyotes were first reported in West Virginia in 1950 but were not commonly observed until the 1990s, and there is scant information on Coyotes in the region. We used telemetry data from 8 radiocollared Coyotes in West Virginia to estimate home-range size and third-order habitat selection. Home-range areas (95% utilization distributions; UDs) varied from 5.22 to 27.79 km2 (mean = 12.48 ± 2.61 km2), with highly concentrated use of …


Carrion Availability In Space And Time, Marcos Moleón, Nuria Selva, David M. Bailey, David M. Bailey, Ainara Cortés-Avizanda, Travis L. Devault Jan 2019

Carrion Availability In Space And Time, Marcos Moleón, Nuria Selva, David M. Bailey, David M. Bailey, Ainara Cortés-Avizanda, Travis L. Devault

United States Department of Agriculture Wildlife Services: Staff Publications

Introduction

Availability of carrion to scavengers is a central issue in carrion ecology and management, and is crucial for understanding the evolution of scavenging behaviour. Compared to live animals, their carcasses are relatively unpredictable in space and time in natural conditions, with a few exceptions (see below, especially Sect. “Carrion Exchange at the Terrestrial-Aquatic Interface”). Carrion is also an ephemeral food resource due to the action of a plethora of consumers, from microorganisms to large vertebrates, as well as to desiccation (i.e., loss of water content; DeVault et al. 2003; Beasley et al. 2012; Barton et al. 2013; Moleón et …


Ecological Functions Of Vertebrate Scavenging, James C. Beasley, Zachary H. Olson, Nuria Selva, Travis L. Devault Jan 2019

Ecological Functions Of Vertebrate Scavenging, James C. Beasley, Zachary H. Olson, Nuria Selva, Travis L. Devault

United States Department of Agriculture Wildlife Services: Staff Publications

Introduction

The role of vertebrate scavenging in food web dynamics has historically been minimalized and portrayed as the activity of a select group of obligate scavengers (e.g., vultures), with a simplistic linkage between carrion and detritivores in food webs. Research in the last few decades, however, has revealed that the role of carrion in food web dynamics is severely underestimated, highly complex, and pervasive among ecosystems across the globe (DeVault et al. 2003; Selva and Fortuna 2007; Wilson and Wolkovich 2011). Such observations have led to a surge in research interest in scavenging ecology that continues to reveal new information …


Locally Fixed Alleles: A Method To Localize Gene Drive To Island Populations, Jaye Sudweeks, Brandon Hollingsworth, Dimitri V. Blondel, Karl J. Campbell, Sumit Dhole, John D. Eisemann, Owain Edwards, John Godwin, Gregg R. Howald, Kevin P. Oh, Antoinette J. Piaggio, Thomas A.A. Prowse, Joshua V. Ross, J. Royden Saah, Aaron B. Shiels, Paul Q. Thomas, David W. Threadgill, Michael R. Vella, Fred Gould, Alun L. Lloyd Jan 2019

Locally Fixed Alleles: A Method To Localize Gene Drive To Island Populations, Jaye Sudweeks, Brandon Hollingsworth, Dimitri V. Blondel, Karl J. Campbell, Sumit Dhole, John D. Eisemann, Owain Edwards, John Godwin, Gregg R. Howald, Kevin P. Oh, Antoinette J. Piaggio, Thomas A.A. Prowse, Joshua V. Ross, J. Royden Saah, Aaron B. Shiels, Paul Q. Thomas, David W. Threadgill, Michael R. Vella, Fred Gould, Alun L. Lloyd

United States Department of Agriculture Wildlife Services: Staff Publications

Invasive species pose a major threat to biodiversity on islands. While successes have been achieved using traditional removal methods, such as toxicants aimed at rodents, these approaches have limitations and various off-target effects on island ecosystems. Gene drive technologies designed to eliminate a population provide an alternative approach, but the potential for drive-bearing individuals to escape from the target release area and impact populations elsewhere is a major concern. Here we propose the “Locally Fixed Alleles” approach as a novel means for localizing elimination by a drive to an island population that exhibits significant genetic isolation from neighboring populations. Our …


Comparing Live-Capture Methods For Nutria: Single- Versus Multiple-Capture Cage Traps, Trevor R. Sheffels, Mark D. Sytsma, Jacoby Carter, Jimmy D. Taylor Jan 2019

Comparing Live-Capture Methods For Nutria: Single- Versus Multiple-Capture Cage Traps, Trevor R. Sheffels, Mark D. Sytsma, Jacoby Carter, Jimmy D. Taylor

United States Department of Agriculture Wildlife Services: Staff Publications

Herbivory and burrowing by nutria (Myocastor coypus) cause substantial ecological and economic damage. Trapping is a common, effective practice for reducing nutria damage; however, trapping approaches must continually be adapted to keep pace with evolving animal welfare and ethical issues and to more effectively target pest species of interest. Our objective was to evaluate the efficacy of 2 nonlethal trap types for nutria: single-capture (SCT) and multi-capture (MCT) cage traps. We established 3 MCTs and 3 SCTs at each of 7 sites on a 10,500-ha mixed-use island located 15 km northwest of Portland, Oregon, USA. We pre-baited using carrots, apples, …


Biology And Impacts Of Pacific Island Invasive Species. 15. Psittacula Krameri, The Rose-Ringed Parakeet (Psittaciformes: Psittacidae)1, Aaron B. Shiels, Nicholas P. Kalodimos Jan 2019

Biology And Impacts Of Pacific Island Invasive Species. 15. Psittacula Krameri, The Rose-Ringed Parakeet (Psittaciformes: Psittacidae)1, Aaron B. Shiels, Nicholas P. Kalodimos

United States Department of Agriculture Wildlife Services: Staff Publications

The rose-ringed parakeet (RRP), Psittacula krameri, has become established in at least four Pacific Island countries (Hong Kong China, Japan, New Zealand, U.S.A.), including the Hawaiian islands of Kaua‘i, O‘ahu, and Hawai‘i. Most Pacific islands are at risk of RRP colonization. This species was first introduced to Hong Kong in 1903 and Hawai‘i in the 1930s–1960s, established since 1969 in Japan, and in New Zealand since 2005 where it has repeatedly established after organized removals. The founding birds were imported cage-birds from the pet trade. In native India, RRP are generally found associated with human habitation and are considered a …


Allowable Take Of Black Vultures In The Eastern United States, Guthrie Zimmerman, Brian A. Millsap, Michael L. Avery, John R. Sauer, Michael C. Runge, Kenneth D. Richkus Jan 2019

Allowable Take Of Black Vultures In The Eastern United States, Guthrie Zimmerman, Brian A. Millsap, Michael L. Avery, John R. Sauer, Michael C. Runge, Kenneth D. Richkus

United States Department of Agriculture Wildlife Services: Staff Publications

Black vultures (Coragyps atratus) have been increasing in density and expanding their range in the eastern United States since at least the 1960s. In many areas, their densities have increased to the level where they are causing damage to property and livestock and the number of requests for allowable take permits has increased throughout these areas. The United States Fish and Wildlife Service (USFWS) requires updated information to help inform the number of take permits that could reduce conflicts while meeting obligations under the Migratory Bird Treaty Act.We expanded analyses used to estimate allowable take in Virginia to …


Evaluation Of Two Unmanned Aircraft Systems As Tools For Protecting Crops From Blackbird Damage, Lucas J. Wandrie, Page E. Klug, Mark E. Clark Jan 2019

Evaluation Of Two Unmanned Aircraft Systems As Tools For Protecting Crops From Blackbird Damage, Lucas J. Wandrie, Page E. Klug, Mark E. Clark

United States Department of Agriculture Wildlife Services: Staff Publications

In response to a need for mitigating blackbird damage to crops, we evaluated the effectiveness of two unmanned aircraft systems (UAS or drones) to protect crops from blackbird damage. UAS are known to elicit behavioral and physiological responses in wildlife and have been proposed as a means to protect row crop agriculture from avian pest depredation. We evaluated the behavioral responses of captive and free-ranging red-winged blackbirds to a fixed-wing and a rotary-wing (multi-rotor, quadcopter) UAS by comparing preflight behaviors to behaviors during UAS approach. Due to the flight limitations of the respective UAS, the fixed-wing and rotarywing were evaluated …


Estimating Economic Impact Of Black Bear Damage To Western Conifers At A Landscape Scale, Jimmy D. Taylor, Kristina N. Kline, Anita T. Morzillo Jan 2019

Estimating Economic Impact Of Black Bear Damage To Western Conifers At A Landscape Scale, Jimmy D. Taylor, Kristina N. Kline, Anita T. Morzillo

United States Department of Agriculture Wildlife Services: Staff Publications

Black bear (Ursus americanus) damage to trees in the Pacific Northwest is common, although volume and economic losses are unknown. Common measures to quantify bear damage to conifers at large scales rely solely on aerial estimates of red tree crowns (caused by complete girdling) and broad assumptions about stand characteristics. We surveyed 122 vulnerable stands in the Coast Range and western Cascades of Oregon using both aerial surveys and ground surveys. Then, we modeled 4 damage scenarios (Salvage; Total Loss; Root Disease; and Combined Damage) with the Forest Vegetation Simulator (FVS) growth and yield model and the Fuel …


Forage Or Biofuel: Assessing Native Warm-Season Grass Production Among Seed Mixes And Harvest Frequencies Within A Wildlife Conservation Framework, Raymond B. Iglay, Tara J. Conkling, Travis L. Devault, Jerrold L. Belant, James A. Martin Jan 2019

Forage Or Biofuel: Assessing Native Warm-Season Grass Production Among Seed Mixes And Harvest Frequencies Within A Wildlife Conservation Framework, Raymond B. Iglay, Tara J. Conkling, Travis L. Devault, Jerrold L. Belant, James A. Martin

United States Department of Agriculture Wildlife Services: Staff Publications

Native warm-season grasses (NWSG) are gaining merit as biofuel feedstocks for ethanol production with potential for concomitant production of cattle forage and wildlife habitat provision. However, uncertainty continues regarding optimal production approaches for biofuel yield and forage quality within landscapes of competing wildlife conservation objectives. We used a randomized complete block design of 4 treatments to compare vegetation structure, forage and biomass nutrients, and biomass yield between Panicum virgatum (Switchgrass) monocultures and NWSG polycultures harvested once or multiple times near West Point, MS, 2011–2013. Despite taller vegetation and greater biomass in Switchgrass monocultures, NWSG polycultures had greater vegetation structure heterogeneity …


Locating And Eliminating Feral Swine From A Large Area Of Fragmented Mixed Forest And Agriculture Habitats In North-Central Usa, Richard M. Engeman, Bradley E. Wilson, Scott F. Beckerman, Justin W. Fischer, Doug Dufford, James Bryan Cobban Jan 2019

Locating And Eliminating Feral Swine From A Large Area Of Fragmented Mixed Forest And Agriculture Habitats In North-Central Usa, Richard M. Engeman, Bradley E. Wilson, Scott F. Beckerman, Justin W. Fischer, Doug Dufford, James Bryan Cobban

United States Department of Agriculture Wildlife Services: Staff Publications

Illinois is one of the US states where elimination of feral swine (Sus scrofa) was determined practical, as only a few isolated populations were established. A particularly important step towards feral swine elimination from Illinois was to eliminate the population in Fulton County. We describe the approaches applied to systematically detect, locate, and eliminate feral swine in a successful county-wide elimination. Detecting and locating feral swine was facilitated by extensive outreach activities, aerial surveys to locate crop damage, and use of camera traps placed over bait in areas where reports, sign, or crop damage occurred. The population was …


Effects Of Repeated Sublethal External Exposure To Deep Water Horizon Oil On The Avian Metabolome, Brian S. Dorr, Katie C. Hanson-Dorr, Fariba M. Assadi-Porter, Ebru Selin Selen, Katherine A. Healy, Katherine E. Horak Jan 2019

Effects Of Repeated Sublethal External Exposure To Deep Water Horizon Oil On The Avian Metabolome, Brian S. Dorr, Katie C. Hanson-Dorr, Fariba M. Assadi-Porter, Ebru Selin Selen, Katherine A. Healy, Katherine E. Horak

United States Department of Agriculture Wildlife Services: Staff Publications

We assessed adverse effects of external sublethal exposure of Deepwater Horizon, Mississippi Canyon 252 oil on plasma and liver metabolome profiles of the double-crested cormorant (Phalacrocorax auritus), a large (1.5 to 3.0 kg) diving waterbird common in the Gulf of Mexico. Metabolomics analysis of avian plasma showed significant negative effects on avian metabolic profiles, in some cases after only two external exposures (26 g cumulative) to oil. We observed significant (p < 0.05) changes in intermediate metabolites of energy metabolism and fatty acid and amino acid metabolic pathways in cormorants after repeated exposure to oil. Exposure to oil increased several metabolites (glycine, betaine, serine and methionine) that are essential to the one-carbon metabolism pathway. Lipid metabolism was affected, causing an increase in production of ketone bodies, suggesting lipids were used as an alternative energy source for energy production in oil exposed birds. In addition, metabolites associated with hepatic bile acid metabolism were affected by oil exposure which was correlated with changes observed in bile acids in exposed birds. These changes at the most basic level of phenotypic expression caused by sublethal exposure to oil can have effects that would be detrimental to reproduction, migration, and survival in avian species.


Wildlife Management Practices Associated With Pathogen Exposure In Non-Nativewild Pigs In Florida, U.S., Amanda N. Carr, Michael P. Milleson, Felipe A. Hernandez, Hunter R. Merrill, Michael L. Avery, Samantha M. Wisely Jan 2019

Wildlife Management Practices Associated With Pathogen Exposure In Non-Nativewild Pigs In Florida, U.S., Amanda N. Carr, Michael P. Milleson, Felipe A. Hernandez, Hunter R. Merrill, Michael L. Avery, Samantha M. Wisely

United States Department of Agriculture Wildlife Services: Staff Publications

Land use influences disease emergence by changing the ecological dynamics of humans, wildlife, domestic animals, and pathogens. This is a central tenet of One Health, and one that is gaining momentum in wildlife management decision-making in the United States. Using almost 2000 serological samples collected from non-native wild pigs (Sus scrofa) throughout Florida (U.S.), we compared the prevalence and exposure risk of two directly transmitted pathogens, pseudorabies virus (PrV) and Brucella spp., to test the hypothesis that disease emergence would be positively correlated with one of the most basic wildlife management operations: Hunting. The seroprevalence of PrV- …


Road Hogs: Implications From Gps Collared Feral Swine In Pastureland Habitat On The General Utility Of Road-Based Observation Techniques For Assessing Abundance, Raoul K. Boughton, Benjamin L. Allen, Eric A. Tillman, Samantha M. Wisely, Richard M. Engeman Jan 2019

Road Hogs: Implications From Gps Collared Feral Swine In Pastureland Habitat On The General Utility Of Road-Based Observation Techniques For Assessing Abundance, Raoul K. Boughton, Benjamin L. Allen, Eric A. Tillman, Samantha M. Wisely, Richard M. Engeman

United States Department of Agriculture Wildlife Services: Staff Publications

Feral swine are among the world’s most destructive invasive species, and monitoring their populations is essential for research and management purposes. Observation stations located along primitive roads have been an efficient and effective means to intercept the daily activities of many animal species for collecting data from which abundance indices can be validly calculated. Feral swine are among the many species documented to use primitive (dirt), low-use roads as routes to easily traverse surrounding habitats and thus be well-monitored in various habitats globally by using road-based observation stations such as camera traps or tracking plots. However, there are relatively few …


Necrobiome Framework For Bridging Decomposition Ecology Of Autotrophically And Heterotrophically Derived Organic Matter, Mark Eric Benbow, Philip S. Barton, Michael D. Ulyshen, James C. Beasley, Travis L. Devault, Michael S. Strickland, Jeffery K. Tomberlin, Heather R. Jordan, Jennifer L. Pechal Jan 2019

Necrobiome Framework For Bridging Decomposition Ecology Of Autotrophically And Heterotrophically Derived Organic Matter, Mark Eric Benbow, Philip S. Barton, Michael D. Ulyshen, James C. Beasley, Travis L. Devault, Michael S. Strickland, Jeffery K. Tomberlin, Heather R. Jordan, Jennifer L. Pechal

United States Department of Agriculture Wildlife Services: Staff Publications

Life arises from death through species that decompose dead biomass or necromass. This paper provides a synthesis of the species responsible for dead plant and animal decomposition and describes a conceptual perspective—the “necrobiome”— that defines the diverse and complex communities that interact to recycle necromass. The concept brings unification to the previously disparate fields of plant and animal decomposition by discussing the universal processes occurring across all forms of necromass. It highlights the factors that make each form of dead biomass different in a way that defines how unique necrobiomes drive decomposition and ultimately shape ecosystem structure and function.