Digital Commons Network^™

Lie-Galois Theory, Giovanni Reed

Honors Undergraduate Theses

Differential equations are a much-studied topic in the field of mathematics, as well as other sciences, such as engineering, economics, and biology. While much is known concerning these, there is still a large gap in our knowledge about such equations. It is important therefore, both to mathematics and other sciences, that we gain a more complete knowledge of differential equations, in particular the nature of their solutions. In this research, we investigate the solution space of linear ordinary differential equations (ODEs) from the standpoint of differential algebra. Differential algebra allows an ODE to be treated similarly to a polynomial, allowing …

Analyzing The Loss Of Material From A Non-Plastic Oyster Reef Restoration Alternative, Lindsay M. Dolan

Honors Undergraduate Theses

Oyster reefs are declining globally due to human impacts such as overharvesting, boat wakes, and climate change. Associated ecosystem services, including water filtration, fish and invertebrates’ habitats, and shoreline erosion protection, are lost when these reefs disappear. Traditionally, restoration efforts employed plastic mesh shell bags filled with recycled oyster shells as they provide recruitment substrate for new oyster spat and wave attenuating properties to protect shorelines. Due to rising concerns over microplastic pollution, non-plastic alternatives are being tested. Alternative restoration material must provide the same benefits to reef formation while maintaining structural integrity long enough for a healthy reef to …

Balancing Evidence Recovery: Hexane’S Effect On Biological And Non-Biological Traces In Sexual Assault Kits, Maya Richards

Honors Undergraduate Theses

This study investigated the effectiveness of solvent – based extraction methods for the recovery of lubricant residues from simulated sexual assault swabs, with emphasis on balancing chemical evidence recovery. Sequential extraction using ultra – pure water followed by organic solvents, hexane, dichloromethane (DCM), and ethyl acetate (EA), was evaluated across water – based, silicone – based, oil – based, and hygiene product matrices. Analysis was performed using Direct Analysis in Real Time – High Resolution Mass Spectrometry (DART – HRMS), and extraction efficiency was assessed through spectral correlation with neat reference samples. Results demonstrated that solvent performance was highly dependent …

Rawls On The Status Of Future Citizens, Michael Moeny

Honors Undergraduate Theses

John Rawls sought to articulate principles for a just democratic society. Those principles must be justified by reasons that could be accepted by all reasonable citizens, regardless of their personal philosophical, religious, or moral commitments—what Rawls refers to as public reason. Basic political concepts, such as citizenship and rights, must also be justified in terms of public reason. Rawls stipulates that citizens enter society at birth, a claim that shapes his answer to whether legal protections for the unborn are justified. I argue that Rawls was not entitled to this stipulation, since it relies on contentious commitments that cannot be …

Impact Of Father-Daughter Communication And Conflict In Emerging Adulthood, Scarlett E. Gomez

Honors Undergraduate Theses

This paper investigated how father-daughter communication patterns, motives, and conflict styles related to daughters’ perceived satisfaction in their relationship during emerging adulthood. Undergraduate participants were involved in an online survey assessing family communication patterns theory, interpersonal communication motives, conflict resolution styles, and father-daughter satisfaction. Bivariate correlations and mean comparisons were primarily relied on for analysis, with a sample size of one hundred thirty-eight undergraduate participants. Results showed that a more open family communication pattern such as the conversation orientation, was positively associated with daughters’ perceived satisfaction of the relationship. A more obedient-focused environment such as the conformity orientation was negatively …

Synthesis And Characterization Of Glass-Ceramic Nanoparticles And Nanobubbles For Integration Into Bone Regenerative Biomaterials, Sun Latt

Honors Undergraduate Theses

Osteoporosis affects over 200 million individuals worldwide and is characterized by an imbalance between osteoclastic bone resorption and osteoblastic bone formation, leading to fragility fractures that significantly diminish quality of life. Current clinical bone cements, such as poly(methyl methacrylate), are limited by poor osseointegration, toxic monomers, and an inability to address the underlying pathophysiology of osteoporosis. This work presents the synthesis, characterization, and systematic in vitro evaluation of a sol-gel-derived, magnesium-incorporated glass-ceramic (GC) nanoparticle within the CaO-MgO-SiO₂ system for incorporation into a novel hydrogel bone cement and bioresorbable magnesium implants. XRD confirmed a biphasic amorphous-crystalline diopside composition, and TEM …

Post-Metabolites Of Two Commensal Bacteria Suppress Dna Damage In An Experimental Model Of Acid Reflux Disease, Maanya Pradeep

Honors Undergraduate Theses

Chronic heartburn or gastroesophageal reflux disease (GERD) affects approximately 25% of the US population [1]. Repeated bile acid exposure from the regurgitation of stomach contents leads to the production of reactive oxygen species (ROS), which can cause oxidative DNA damage and promote genomic instability [2]. Barrett’s esophagus (BE), which can develop as a response to chronic bile acid exposure, increases the risk of esophageal adenocarcinoma (EAC) by 30% to 125% [1].

There are more than 18,000 new cases of esophageal cancer in the United States each year, and while its incidence is relatively low compared to other cancers, its mortality …

The Role Of P2y1 And P2y2 Receptors In Human Neural Stem Cell Proliferation, Daria Sokolova

Honors Undergraduate Theses

Endogenous neural stem cells (NSCs) are located in specialized niches of the adult brain and play a vital role in both neurogenesis and neuronal repair. However, declines in NSC proliferation and metabolism associated with age and pathology make these cells less efficient at responding to neurodegenerative disease. Understanding signaling pathways that regulate NSC function is therefore essential for the understanding and development of treatments for these conditions. P2Y receptors are G-protein-coupled purinergic receptors that are activated by extracellular nucleotides and regulate cellular metabolism and proliferation. Among the eight known P2Y subtypes, P2Y1 and P2Y2 have been linked to neuronal signaling …

Magnesium-Based Metal Matrix Nanocomposite Implants And Nanobubble-Based Delivery Systems: Integrated Strategies For Bone Loss Treatment With Cytocompatibility Evaluation, Lucas José Martinho Bizuti

Honors Undergraduate Theses

This thesis intends to investigate the development of different multimodal therapeutic strategies for combating bone loss. Most specifically, this paper will emphasize the utilization of Magnesium-Based Metal Matrix Nanocomposite Implants (MMNC) and Nanobubble-Based Delivery Systems as options for future treatment focus. The effects of biodegradable magnesium implants were evaluated for cytotoxicity and cytocompatibility via Hematoxylin and Eosin, and Masson’s Trichrome staining, as well as radiological images. The Nanobubble-Based Delivery System is being developed and optimized as a delivery system to target osteoclast activity. This paper focused on optimizing experimental parameters, which include Rotational speeds for nanobubble stimulation under microgravity conditions …

The Hungry Mind: Fasting, And Executive Functions In Muslim College Students Living In America, Fatima Alziyad

Honors Undergraduate Theses

Ramadan fasting represents a unique intersection of religious observance and academic responsibility for Muslim college students in the United States. Despite the growing Muslim student population, no U.S.-based research has examined how fasting influences executive functioning within this group. This study investigated the effects of voluntary Islamic fasting on executive functions, specifically working memory, inhibitory control, and sustained attention, using a within-subject crossover design. Muslim undergraduate and graduate students who regularly observe Sunnah fasts completed cognitive testing on one fasting day and one non-fasting day. Working memory was assessed using the 2-back task, inhibitory control using the Stroop task, and …

Vibration-Based Control Of Nonlinear Dynamic Systems, Ossyris N. Bury

Honors Undergraduate Theses

This thesis investigates vibration-based stability as a mechanism for achieving self-stabilizing nonlinear dynamic motion in engineered systems. Inspired by biological hovering flight, in which periodic wing motion can passively enhance stability, the study explores how controlled oscillations can be used to stabilize otherwise unstable mechanical configurations. The research centers on a simplified dynamic model based on the Kapitza pendulum, an inverted pendulum with a vertically oscillating base, which serves as a foundation for understanding vibration-induced stabilization. Analytical modeling using Lagrangian mechanics is employed to derive the governing equations of motion and identify the excitation conditions required for stable inverted behavior. …

Borderline Personality Traits And Their Impact On Facial Ambiguity, Perceived Rejection, And Self-Esteem, Anya Mathur

Honors Undergraduate Theses

The present study examined whether borderline personality disorder (BPD) traits are associated with differences in self-esteem and interpretations of ambiguous facial expressions, as well as how rejection sensitivity relates to these processes. Participants (N = 135) completed measures of BPD traits, rejection sensitivity, and self-esteem, and rated ambiguous facial expressions on perceived emotion, social inclusion, and evaluation. Results indicated that individuals with higher BPD traits reported significantly lower post-task self-esteem and showed a decrease in self-esteem following the task compared to those with lower BPD traits. Contrary to expectations, no significant group differences were found in interpretations of ambiguous facial …

Effects Of Musical Tempo On Heart Rate, Blood Pressure, And Heart-Rate Variability, Om Pathak

Honors Undergraduate Theses

This study examines how changes in rhythmic patterns and tempo of music affect physiological measures of homeostasis, such as heart rate variability (HRV), blood pressure (BP), and heart rate (HR). HRV is shown to be a biological indicator of aging, to a higher sensitivity than HR and BP. While both HR and BP have shown to remain stagnant and less variable, HRV steadily declines over time - indicative of the declining function of the autonomic nervous system (ANS). Previous studies have demonstrated a physiological effect of music on bodily function - such as through emotive changes and variability within homeostatic …

Relationships Between Quadriceps Neuromuscular Function And Time From Surgery Following Acl Reconstruction Are Sex-Specific, Tatiana Restrepo

Honors Undergraduate Theses

Anterior cruciate ligament reconstruction (ACLR) is associated with persistent quadriceps dysfunction, including muscular weakness and altered spinal and cortical excitability. While recovery has been widely studied, most investigations focus on isolated domains and fixed postoperative time points. Emerging evidence suggests females often experience slower or less complete quadriceps recovery compared to males, yet the time-dependent nature of these sex-specific outcomes remains unclear. The purpose of this study is to examine whether relationships between time since ACLR and quadriceps neuromuscular outcomes differ by sex across muscular, spinal, and cortical domains. Adults aged 18–35 with a history of primary, unilateral ACLR were …

Exploring Anticholinergic Neurotoxicity: Diphenhydramine's Impact On Neuro-2a Cell Morphology, Expression, And Viability, Jordan B. Mcintyre

Honors Undergraduate Theses

Anticholinergic medications, such as diphenhydramine (commonly known as Benadryl), are increasingly recognized for their association with cognitive impairment and neurodegenerative disease. These medications, which inhibit the action of acetylcholine, a neurotransmitter essential for the formation and utilization of the central and peripheral nervous system, have been implicated in conditions such as dementia and may impact fundamental cellular processes like neurogenesis and cell proliferation. This study investigates the effects of diphenhydramine on neurogenesis when introduced to Neuro-2a cells during differentiation. For all studies cells were plated on coverslips or in 6-well plates with differentiation media containing 0 ng/mL, 50 ng/mL, …

Development Of A Split Deoxyribozyme-Based Assay For Detecting Hepatitis B Virus, Dalila Zovko

Honors Undergraduate Theses

Rapid, accessible nucleic acid-based detection methods are needed for hepatitis B virus (HBV). A split deoxyribozyme assay was developed for sequence-specific fluorescence detection. The assay was evaluated using synthetic target and plasmid-derived material. The assay showed target-dependent fluorescence and low-concentration linear range with a LOD of 1.9 nM. The assay supports detection and semi-quantification of HBV genetic material as shown using plasmid-derived transcript samples from HBV genotypes B, C, and D. The selected target corresponded to nt 363–406 of the HBV genome and was chosen based on sequence alignment showing conservation across most genotypes. Genotype-specific detection remains a future application …

A Qualitative Analysis Of Youtube-Based Dietary Messaging On Type 2 Diabetes For South Asians, Sukhmani K. Dhaliwal

Honors Undergraduate Theses

While South Asians experience a disproportionately high risk of Type 2 Diabetes Mellitus (T2DM), culturally tailored dietary guidance remains limited within healthcare settings. As digital platforms increasingly serve as sources of health information, YouTube has grown as a prominent space for the publishing and consumption of dietary advice. This study examines how diet-related messaging about T2DM is communicated in YouTube videos directed at South Asian populations.

Using qualitative thematic analysis, 21 videos published between 2016 and 2025 by influencers with a wide reach were analyzed. Videos were selected based on relevance to South Asian audiences, focus on dietary management of …

“Mother Earth” Faces Sexism” (The Relationship Between Gender, Sexism, And Politics To Climate Change Recognition), Sierra E. Nichols

Honors Undergraduate Theses

Climate change is a prominent scientific and political issue today. Research has shown women to be uniquely vulnerable to the impacts of climate change and subject towards political opinions that can be rooted in sexism. This study aims to draw a correlation between these factors. It provides an overview of the topic of climate change and women’s linkages with the environment through the topic of ecofeminism. It analyzes the topic of sexism and analyzes research surrounding different types of sexism: hostile, benevolent, and modern sexism. It discusses how studies that have categorized climate change as a gendered issue, climate change …

A Secondary Analysis Of The Short-Term Effects Of Kettlebell Swings On Lumbopelvic Pressure Pain Thresholds: A Randomized Controlled Trial, William J. Hanney V

Honors Undergraduate Theses

This study was a secondary analysis of The Short-Term Effect of Kettlebell Swings on Lumbopelvic Pressure Pain Thresholds: A Randomized Controlled Trial as authored by Keilman et al. The study contained 40 healthy young adults and measured the effects of kettlebell swings (KBS) on acute pain perception using pressure pain threshold (PPT). Overall, this secondary analysis utilized a repeated measures ANOVA to determine the significance on dynamic versus static KBS on acute pain perception as measured with PPT. The results were not statistically significant, which suggests that either exercise variation could be performed with similar results in pain perception. Although …

A Systematic Literature Review Of The Menstrual Cycle And Its Impact On Aerobic Performance In Female Athletes, Jaymie G. Loidolt

Honors Undergraduate Theses

The purpose of this systematic review is to examine existing literature regarding the menstrual cycle and its impact on aerobic performance in female athletes. This comprehensive review was conducted using the PRISMA 2020 method of analysis. All studies included involved normally menstruating females conditioned in endurance sport. Studies analyzing anaerobic sports, abnormally menstruating females, or physically inactive females were excluded. The databases used included: PubMed, Sport Discus, and Web of Science. The results of these were imported into JBIsumari for deduplication, title and abstract, and full text screening. The results conclude objective performance variables are unchanged regarding the phase of …

Dna Half-Adder Based Calculator Driven By 4j Molecular Switches, Andrea Gissele Canizalez Covaleda

Honors Undergraduate Theses

DNA nanostructures have computing functions due to the predictable base pairing of nucleic acids (Watson–Crick). This property allows the programming of DNA circuits that integrate DNA logic gates capable of recognizing oligonucleotides. This molecular device offers the advantages of biocompatibility and potential applications in personalized medicine for diagnosis and therapies.

Our lab has developed DNA logic gates formed by the connection of YES strands via DNA four-way junctions (4J), which can function as molecular switches to develop a DNA-based calculator. Our DNA half-adder calculator nanostructure is designed to recognize up to three combinations of DNA inputs using three DNA strands …

Analysis Of Alternative Gene Splicing Of Natural Killer Cell Exhaustion Markers During Siv Infection, Soledad B. Zayas

Honors Undergraduate Theses

Natural killer cells play a critical role in the innate immune response against Human Immunodeficiency Virus and Simian Immunodeficiency Virus infections. During HIV/SIV infection, NK cells undergo functional impairment characterized by an imbalance between activating and inhibitory surface receptors. The upregulation of inhibitory receptors, TIGIT and TIM-3, has proven to contribute to NK cell exhaustion during different retroviral infections. Although alternative splicing regulates immunity related genes, its role in TIGIT and TIM-3 expression during SIV infection remains poorly understood. This study aimed to characterize alternative splicing patterns of TIGIT and TIM-3 and evaluate transcript variant expression during SIV infection in …

The Environmental Impact On The Development Of Equine Degenerative Myeloencephalopathy, Victoria C. Reynolds

Honors Undergraduate Theses

The objective of this study was to examine potential associations between environmental factors and the progression of Equine Degenerative Myeloencephalopathy (EDM). While environmental contributions to neurodegenerative diseases are increasingly recognized in human patients, little is known about their role in EDM. A comprehensive literature review highlighted the lack of research in this area. Data for this study were collected by Dr. Amy Johnson at the University of Pennsylvania's New Bolton Center. The two main areas studied were a horse’s lifestyle (specifically turnout conditions) and their geographical proximity to chemicals (pesticides, airborne neurotoxins, and water contaminants). Statistical analysis revealed there was …

Evaluating The Comparison Of Different Body Locations For Data Collection Using Galvanic Skin Response Of Forensic Chemistry Students When In Lecture And Laboratory Environments, Elisa Guerrero

Honors Undergraduate Theses

Anxiety is the response that humans can have when exposed to a stimulus. It can be caused by a multitude of factors, such as psychological, biological, or physiological stimuli. Anxiety can be presented as a state or as a trait in a person. Trait anxiety is typically seen as a more stable personality trait, whereas state anxiety is a more intense temporary emotional state. In our study, anxiety was regarded as a more state-like characteristic. A galvanic skin response (GSR) Shimmer3+ device can measure skin electro-conductance changes following stimulation. In a situation where a participant is experiencing anxiety, levels of …

Mycoethics: Reverence For Life In Light Of Modern Science, Charis E. Meyers

Honors Undergraduate Theses

There is a 21^st century wave of passion surrounding fungi and mycology, and it’s becoming louder and louder. The mycoenthusiasts themselves have a uniquely inspired ethical system born out of their science, and my aim is to both formally introduce their position, including many unspoken foundations, and defend its potential. I call this position mycoethics and attempt to collect it from the scattered tidbits in mycological media. I first identify its historical precedent, then spend a length of time establishing where its sense of goodness comes from, postulating it as a utilitarian offspring of Albert Schweitzer’s reverence for life. …

Computational Methods For Rna 3d Structure Classification And Structural Motif Discovery, Nabila Shahnaz Khan

Graduate Studies Theses and Dissertations 2026

Non-coding RNAs perform diverse and essential cellular functions, and the study of RNA structures is expanding rapidly. The growing volume of RNA 3D structures highlights the need for efficient computational methods to identify recurring structural motifs, which are often conserved and critical to RNA function. However, the complexity and redundancy of RNA structures in existing databases pose significant challenges for motif discovery and structural analysis. To address these challenges, this dissertation presents three complementary computational approaches. First, a non-redundant RNA structural dataset, RNA-NRD, was developed to systematically reduce redundancy in RNA structural data and provide a reliable foundation for downstream …

Exercise-Induced Muscle Swelling And Impedance Changes Of The Elbow Flexor, Sofea Smith

Graduate Studies Theses and Dissertations 2026

Electrical impedance myography (EIM) is a non-invasive method that assesses body fluid distribution using impedance (Z), resistance (R), reactance (Xc), and phase angle (PhA). These values have previously been used to interpret cellular health and fluid shifts. Acute muscle edema known as a “pump,” has been reported during and after resistance training exercise and the extent to which bioelectrical properties of the muscle tissue are affected during this process remains relatively unexplored. Therefore, the purpose of this study was to assess changes in EIM during exercise-induced muscle swelling via resistance training. Thirty-one resistance-trained adults (male=21, female=10; age=23.4±6.5 years, BMI=26.17±3.04 kg/m2) …

Site Use And Demographic Changes In A Northwest Atlantic Sea Turtle Foraging Ground, Ryan C. Welsh

Graduate Studies Theses and Dissertations 2026

and site fidelity, making mortality difficult to distinguish from redistribution. We developed a behaviorally explicit framework to separate true mortality from changes in availability caused by movement and redistribution. We evaluated this problem for juvenile green turtles (Chelonia mydas) and loggerhead turtles (Caretta caretta) captured at the St. Lucie Nuclear Power Plant intake canal on Florida’s Atlantic coast using a multi-decade capture–mark–recapture record spanning 1977 - 2023. Hidden Markov Models classified individuals into latent habitat-use strategies (Nomadic, Resident, and Transient) based on capture timing and body size. Across both species, these strategies captured consistent differences in site fidelity and recapture …

Understanding The Potential Biogeochemical Effects Of Alternative Restoration Materials: A Study Of Basalt And Other Materials, Cadie L. Barnes

Graduate Studies Theses and Dissertations 2026

Concern over the effects of microplastics on estuarine ecosystems and public health has prompted many restoration practitioners to switch from plastic materials to more “natural” substrates. These natural (BESE-biopolymer, cement-jute structures) and non-plastic (basalt fiber) materials should not contain harmful substances; however, their chemical composition is unknown. Natural materials may degrade faster in subtropical environments and release nutrients into surrounding waters, which is concerning for eutrophic restoration areas. Basalt fiber bags, made from melted basalt rock spun into fibers, have not been evaluated for biogeochemical impacts within estuaries. To address this knowledge gap, two field experiments and two laboratory experiments …

Complexity Theory And Environmental Conservation Management: A Case Study With Coyote And Red Wolf Hybridization, Gretchen E. Mahalic

Honors Undergraduate Theses

Conservation biology and invasion biology are value-led scientific disciplines founded on environmental advocacy, operating at the intersection of research and action. Though these disciplines are known for their scientific veracity, unexamined values are often promulgated without scrutiny and drive decisions that work against good ecological outcomes. A case in point is that coyotes migrating into southeastern territory are framed as the greatest threat to the conservation of the endangered red wolf because hybridization is seen as diminishing their species integrity. Applying Val Plumwood’s ecofeminist account of dualistic frameworks, I will use this case to show how the vilification of the …