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Computational Modeling Of The Fanconi Anemia Gene Network And Its Connection To Cancer, Alyssa Warren-Belford

Biological Sciences Undergraduate Honors Theses

Fanconi anemia (FA) is a rare genetic condition in which the cell’s DNA repair machinery is dysregulated, significantly increasing the chances of tumorigenesis. Further research is being done in order to improve patient outcomes and incidences of cancer. Our group created a computational model of the FA DNA repair gene network, which removes interstrand crosslinks found in damaged DNA and repairs it so DNA synthesis can continue. Computer simulations show the number of DNA damage indicators decreased as the pathway continued. This was expected as the FA pathway repairs DNA damage. The goal of this project was to provide further …

Exploring A Potential Bias In Detection Of Mesopredators By Cameras, Rylee Gibson

Biological Sciences Undergraduate Honors Theses

Mesopredators, such as the raccoon (Procyon locor), Virginia opossum (Didpelphis virginiana), and striped skunk (Mephitis mephitis) play crucial ecological roles as predators, prey, and disease vectors across much of the United States. Because of their importance and the way that populations of these mesopredators can dramatically increase due to human-subsidized resources, it is imperative that studies attempting to quantify mesopredator community composition are accurate and unbiased. However, it has recently been suggested that not all mammals trigger motion-activated wildlife game cameras at the same rate and for some species detection probability may be biased. My goals for this thesis were …

Understanding The Role Of Heterodisulfide Reductase During Nitrogen Fixation By Methanosarcina Acetivorans, Grant Shelnut

Biological Sciences Undergraduate Honors Theses

Methanosarcina acetivorans is a methanogenic archaeon (methanogen) that is important for several processes in our biosphere. A feature of interest within this methanogen is the enzyme nitrogenase which catalyzes the reduction of unusable dinitrogen gas (N₂) into a usable form of nitrogen, ammonia (NH₃). How electrons are transferred within M. acetivorans to nitrogenase during N₂ reduction is unknown. Heterodisulfide reductase (Hdr) is a key enzyme known to reduce the electron carrier protein ferredoxin, which is a direct electron donor to nitrogenase in bacteria. I hypothesized that cytoplasmic HdrA2B2C2 functions in electron transfer to nitrogenase and …

Minimal Carbon Requirements For Potential Colonizers Of Other Planets, Benjamin Tan

Biological Sciences Undergraduate Honors Theses

The NASA Office of Planetary Protection regulates the safe scientific exploration of other planets. Specifically, the office enacts rules to discourage interplanetary mission practices that would lead to the contamination of Earth-originating microbial life on other planets. Interplanetary contamination jeopardizes the potential to obtain reliable scientific evidence for extraterrestrial life. In coordination with this office, the biosignatures of potential colonizers of other celestials bodies are studied. Several organisms of Earth qualify as potential colonizers of other planets.

This experiment focused on the environment of Mars in particular. Two organisms were tested: Desulfovibrio arcticus and Desulfotalea psychrophila. Both are psychrotolerant or …

Identifying Nocturnal Pollinator Diversity In Apple Orchards In Northwest Arkansas, Emily Brown

Biological Sciences Undergraduate Honors Theses

Insects have an essential role in nature, largely in part to pollination. These animals allow for many plants to reproduce and are directly involved in many of the earth’s fruit and vegetable supply. Bees, along with many other diurnal pollinators have gained the attention of the public, which has sparked debates and change to protect them. Many nocturnal species have previously been disregarded due to the assumption that diurnal pollinators provide the only significant pollinations, although recent studies show otherwise. For example, a recent study in apples suggests that nocturnal insects increase fruit production and flower cluster pollination at comparable …

Involvement Of Chromosome Remodeling Complexes On Chromosome Segregation, Adelle Warford

Biological Sciences Undergraduate Honors Theses

Errors in chromosome segregation during cell replication are detrimental to the health of living cells. These errors cause aneuploidy: daughter cells with an incorrect number of chromosomes, as well as polyploidy: the complete duplication of a genome. In humans, these segregation errors are responsible for many harmful diseases and disorders. Using the model organism S. cerevisiae, a double mutant was created by removing two key chromosome remodeling complexes, SWR1 and INO80, both known to independently cause aneuploidy, decreased fitness, and damages the sensitivity of a cell's DNA (Andalis et al. 2004). By creating a double mutant strain, genetic cell …

Laboratory Evaluation Of An Enzyme Immunoassay To Detect Coccidioides Galactomannan Antigens In Serum Samples, Anneliese Ahrens

Biological Sciences Undergraduate Honors Theses

Introduction: Coccidioidomycosis (cocci) is an infection caused by fungal pathogens in soil of dry and arid regions in the Southwestern states of the United States. The disease can present itself anywhere in the body, but usually is found in the lungs. The symptoms are very similar to the symptoms of a bacterial or viral respiratory infection, which is one of the reasons it is commonly misdiagnosed or left untreated. The CDC reports cases to have increased 143% from 2014 to 2019, with a mortality rate of 200 deaths per year, however this is likely underreported because of the inadequacies of …

Hormonal Control Of Osmoregulatory Proteins In The Intestine Of Atlantic Killifish (Fundulus Heteroclitus), Karma Hine

Biological Sciences Undergraduate Honors Theses

The Atlantic killifish (Fundulus heteroclitus) is a euryhaline fish, and thus able to maintain ionic and osmotic homeostasis in a wide range of salinities. When exposed to the dehydrating marine environment, the lost water is replenished through drinking seawater (SW) which is processed and absorbed in the intestine through the involvement of various cellular effectors. Intestinal water transport is osmotically driven by the active removal of NaCl from the gut lumen to the blood coupled to the precipitation of divalent Mg²⁺ and Ca²⁺ due to the secretion of bicarbonate. These processes allow for successive removal of …

Women In Southern Politics: How The Southern Experience Shaped Two Contemporary Forces, Liza Montgomery

Political Science Undergraduate Honors Theses

Numerous books, papers, journals, articles, and newspapers have explored the human experience in the American South for many decades. Much of this recorded history and further academic and historical literature spans the time period since the passage of the Nineteenth Amendment in 1920. Most of these works, while claiming to focus on the entire population, address only the life experiences of men while assuming their information pertains to the entire population. Although a portion of these accounts focus on the African American experience overall, just a fraction examines the female experience. In this paper I will be examining women’s political …

The Impact Of Low Appendicular Skeletal Muscle Mass In The Development Of Insulin Resistance And Metabolic Syndrome: A Systematic Review Of The Literature, Ella Boston

The Eleanor Mann School of Nursing Undergraduate Honors Theses

Chronic conditions are the leading cause of death and disability. More specifically, cardio-metabolic disease is the number one cause of death worldwide. The tragedy and burden of disease is unrefuted; even more so, evidence indicates that realistic modifications of lifestyle can prevent most chronic disease. Metabolic syndrome and insulin resistance are leading risk factors in the development of cardio-metabolic disease. Presently, chronic disease is treated through symptomatic evaluation of risk. Reframing the lens of care through root cause evaluation is fundamental to optimizing patient outcomes. The purpose of this systematic review is to synthesize literature evaluating the impact of low …

The Gender Investing Gap: A Global Viewpoint, Olivia Walker

Economics Undergraduate Honors Theses

The gender investing gap is a topic of increasing concern, referring to the disparities in investment participation and outcomes between men and women. This gap is prevalent in various financial instruments, including stocks, bonds, and mutual funds. Its consequences for women include reduced savings and accumulation of assets, decreased financial security, and lower savings for retirement. The economic costs of the gender investing gap are substantial, with an estimated $3.22 trillion more available for investment and $1.87 trillion more invested in socially and environmentally responsible companies if women invested at the same rate as men. This literature review examines the …

Ranking Highway Transportation Asset Criticality Through Stakeholder Input Using The Analytical Hierarchy Process (Ahp), Kwadwo Amankwah-Nkyi

Graduate Theses and Dissertations

The transportation system is especially vulnerable to natural and human-made disasters which can have effects on mobility, safety, and the economy. This thesis presents a method to rank transportation assets based on their criticality to the transportation system by uniquely gathering stakeholder input on criticality criteria weights. This serves as a typical first step in vulnerability and resilience assessments. Six criteria were used to estimate asset criticality: Annual Average Daily Traffic (AADT), roadway classification, freight output, tourism output, Social Vulnerability Index (SoVI), and redundancy. Then, the criteria are combined via stakeholder input using a weighted ranking scheme called the Analytical …

Queer Need In The Natural State: An Exploratory Needs Assessment Of The 2slgbtqia+ Community In Northwest Arkansas, Leea Jean Johnson

Graduate Theses and Dissertations

This thesis explores the current needs of the 2sLGBTQIA+ community in Northwest Arkansas between the ages of 18-40 and what their experiences have been attempting to get their needs met. Eight semi-structured interviews were completed with members of the 2sLGBTQIA+ population, and ethical considerations were made throughout the process. The findings of this study were expansive and included six overarching themes with various subthemes. The findings report on the specific needs outlined by participants, how participants found the resources to meet their needs, and common positive and negative experiences that participants identified in the process. Findings showed that intersectional identities …

An Ecological Perspective Of American Rodent-Borne Orthohantavirus Surveillance, Nathaniel Mull

Graduate Theses and Dissertations

Orthohantaviruses are a global group of viruses found primarily in rodents, though several viruses have also been found in shrews and moles. Many rodent-borne orthohantaviruses are capable of causing one of several diseases in humans, and the mortality associated with these diseases ranges from < 0.1% - 50% depending on the specific etiological virus. In North and South America, orthohantavirus research was ignited by an outbreak of severe disease in the Four Corners region of the United States in 1993. However, despite the discovery of over 20 orthohantaviruses in the Americas, our understanding of orthohantavirus ecology and virus-host dynamics in this region is still limited, and orthohantavirus surveillance is generally restricted in scope to select regions and small portions of host distributional ranges. In Chapter I, I present a literature review on the current understanding of American rodent-borne orthohantavirus ecology. This review focused on under-studied orthohantaviruses, addressing gaps in knowledge by extrapolating information from well-studied orthohantaviruses, general rodent ecology, and occassionally from Eurasian orthohantavirus-host ecology. There were several key conclusions generated from this review that warrant further research: 1) the large number of putative orthohantaviruses and gaps in orthohantavirus evolution necessitate further surveillance and characterization, 2) orthohantavirus traits differ and are more generalizable based on host taxonomy rather than geography, and 3) orthohantavirus host species are disproportionately found in grasslands and disturbed habitats. In Chapter II, I present a prioritized list of rodent species to target for orthohantavirus surveillance based on predictive modeling using machine learning. Probable orthohantavirus hosts were predicted based on traits of known orthohantavirus hosts using two different types of evidence: RT-PCR and virus isolation. Predicted host distributions were also mapped to identify geographic hotspots to spatially guide future surveillance efforts. In Chapter III, I present a framework for understanding and predicting orthohantavirus traits based on reservoir host phylogeny, as opposed to the traditional geographic dichotomy used to group orthohantaviruses. This framework establishes three distinct orthohantavirus groups: murid-borne orthohantaviruses, arvicoline-borne orthohantaviruses, and non-arvicoline cricetid-borne orthohantaviruses, which differ in several key traits, including the human disease they cause, transmission routes, and virus-host fidelity. In Chapter IV, I compare rodent communities and orthohantavirus prevalence among grassland management regimes. Sites that were periodically burned had high rodent diversity and a high proportion of grassland species. However, rodent seroprevalence for orthohantavirus was also highest in burned sites, representing a trade-off in habitat management outcomes. The high seroprevalence in burned sites is likely due to the robust populations supported by the high quality habitat resulting from prescribed burning. In Chapters V and VI, I describe Ozark virus and Sager Creek virus, two novel orthohantaviruses discovered from specimens collected during Chapter IV. Both chapters report full genome sequences of the respective viruses and compare both nucleotide and protein phylogenies with related orthohantaviruses. Additionally in Chapter VI, I support the genetic analyses with molecular and ecological characterizations, including seasonal fluctuations in host abundance, correlates of prevalence, evidence of virus shedding, and information on host cell susceptibility to Sager Creek virus.

This Woman's Work: A Comprehensive Analysis Of The Domestic Workers Who Swept The Shards Of A Shattered Glass Ceiling, Grier Mcclard

Political Science Undergraduate Honors Theses

In "This Woman's Work: A Comprehensive Analysis of the Domestic Workers who Swept the Shards of a Shattered Glass Ceiling" Grier McClard argues that the industry of Domestic Service experienced a massive shift in the second half of the 20th century, transforming from a sign of wealth and privilege, to a necessity for many. Despite the necessity of domestic workers for families, they are consistently one of the most unprotected and underpaid class of workers. McClard ties these changes in Domestic Work to Second Wave feminist ideology, and the influx of women working away from their houses.

Battery Design, Construction, And Characterization For Small Motor Use Focusing On Anodic Zinc For Electron Flow, Amber Veach

Chemical Engineering Undergraduate Honors Theses

This thesis explores the construction, characterization, and application of anodic zinc batteries for powering a small electric motor for the ChemE Car competition. Two zinc galvanic cell batteries were studied: zinc-carbon and zinc-air batteries. Prototype batteries were constructed and tested for voltage, amperage, and power production. In the zinc-carbon trials, a 3:1 mixture of manganese dioxide and graphite was determined to be the best cathode for power production. The size which allowed for sufficient power while maintaining the smallest footprint on the car was a zinc can six cm tall and two cm in diameter. Analysis of paper zinc-air battery …

Greenhouse Gas Emissions From Milk Production In The Us, Cailey Cooper

Chemical Engineering Undergraduate Honors Theses

Life cycle assessment is performed to determine the environmental impacts of the life cycle of a product. In this study, the greenhouse gas emissions from milk production in the United States were calculated using a cradle-to-gate analysis. The dairy industry has a noticeable impact on the total greenhouse gas emissions in the US. Performing life cycle assessment provides information about the main emission sources in the life cycle which can spark innovative changes to reduce these emissions. The life cycle assessment was performed using the openLCA software and ReCiPe impact assessment methodology. The results indicated that 1.28 kg of carbon …

Interactions And Phenomena Between Disodium Cromoglycate And Polyelectrolytes, Brandon Tipton

Chemical Engineering Undergraduate Honors Theses

The interactions between polyelectrolytes and oppositely charged macroions have been widely studied, but few reports have been made on the interaction between chromonic mesogens and polyelectrolytes. Here, we report on the formation of liquid crystalline coacervates achieved by the liquid-liquid phase separation of an aqueous solution of negatively charged liquid crystal and polycations. As well as the occurrence of tactoids that form in the absence of these interactions. The liquid crystal that is experimented with is disodium cromoglycate, better known as DSCG. This acts as a negative charge that is paired with a variety of positively charged polyelectrolytes. The first …

Separation Of Organic Acids Through Direct Catalysis From Sugars, Katelyn Robinson

Chemical Engineering Undergraduate Honors Theses

Society relies on plastic products, whether they are single use or durable. A downside of plastic is that the most common type is a product of oil and oil is not only a limited resource but also a climate-damaging resource. Polylactic acid (PLA) is a bio-based, biodegradable plastic. However, the process of converting biomass to polylactic acid polymer has the largest environmental impact of the PLA production process, so alternative methods of conversion are needed (Moretti et al., 2021). The polylactic acid polymer can be made with lactic acid, which can be converted from glucose.

Response Of Cell Nuclei To Mechanical Strain In Synthetic Liquid Crystals, Sydnee Ehorn

Chemical Engineering Undergraduate Honors Theses

In this research project, induced mechanical stress on the cell nucleus via synthetic liquid crystals (LCs) was explored. Points of interest were the shape alterations and distortions of the nuclear envelope under strain, providing insight into the mechanics and stiffness of the cell nuclei. LCs are substances with structure and fluidity, and LCs in the nematic phase are aligned in a single direction without layers, inducing shear stress on inclusions. This study confirmed that an aqueous solution of 17.3 wt% disodium cromoglycate (DSCG) can successfully strain the nuclei of chicken red blood cells (RBCs) by examining the nuclear response to …

Generating An Alternative Thesis Pathway: Critical Reflection Of Coursework And Internships, Kendele Kramer

Biological and Agricultural Engineering Undergraduate Honors Theses

Since internship experiences are recognized as high impact educational practices and the honors thesis is designed to be a gateway to work beyond the typical undergraduate degree, I helped develop a pathway for BENG honors students to use critical reflection to develop an honors thesis related to internship and class experience. Then, I wrote about my own experiences to serve as an example for future BENG students who want to pursue this pathway.

My objective for this example thesis was to describe the value of my engineering and technical internships and coursework and how they have shaped my future career …

Characterization And Manipulation Of Double-Stranded Dna Using Atomic Force Microscopy, Lauren Skartvedt

Mechanical Engineering Undergraduate Honors Theses

An atomic force microscope (AFM) is used to scan high-resolution images on the nano scale. The lambda DNA used for this project are 48,502 base pairs in length and are double-stranded. This project utilizes the NanoSurf Core AFM in order to characterize and manipulate strands of lambda DNA which have been deposited on a mica surface. The deposition process of the DNA on the mica surface was developed by the National Institute of Standards and Technology and the University of Colorado - Boulder. The AFM is used in imaging mode to scan the mica surface to locate the DNA. When …

Study Of Weight Gain In Freshman Students At The University Of Arkansas, Lily Maleknia

Graduate Theses and Dissertations

This study was designed to examine the poor (non-nutritional) food choices that college freshman make when living on-campus and eating at on-campus dining facilities. These poor choices lead to excessive weight gain, eating disorders, declining health and wellness, and mental health issues (i.e. depression, anxiety, lack of self-confidence). These side effects can lead to a less than desirable 1st year college experience and lack of academic success. Based on these concerns, different investigations have been performed to determine the causes of this phenomena. Given adolescent weight gain is highly linked to being overweight and obesity in adults, a better understanding …

Dicamba Translocation And Metabolism In Susceptible Soybean And Evaluation Of Factors Contributing To Volatilization, Maria Leticia Zaccaro

Graduate Theses and Dissertations

The expansion of dicamba-resistant technology increased the use of dicamba in season and relocated the off-target movement towards the growing season, negatively affecting susceptible vegetation, such as soybean. This research aimed to understand different aspects of the off-target movement of dicamba and impact on susceptible soybean. A study determined the accumulation of dicamba in soybean seed (grain) when parental plants at the pod-filling stage were treated with 1/200 of a labeled rate of dicamba at 560 g ae ha-1 and radiolabeled herbicide used as a tracer. This research found that 44% of the total herbicide absorbed by the parent plants …

Effects Of Land Use On Soil Microbial Communities In Tropical Montane Forests Of Malaysian Borneo, Yang Kai Tang

Graduate Theses and Dissertations

Land use, such as logging and forest conversion to agriculture, can modify soil physicochemical and biological properties, and affect soil health. To understand how land use change can impact soil properties and canopy structure, we used a land use gradient in Malaysian Borneo consisting of six sites, including old growth forests, mixed forests, and agriculture fields. Specifically, we aimed to answer the following questions: (1) How do soil physicochemical properties vary across land use types? (2) Does bacterial diversity and composition vary across different land use types? (3) Does fungal diversity and composition vary across different land use types? We …

Factors That Affect Home Range Of Timber Rattlesnakes (Crotalus Horridus) In Northwest Arkansas, Bannon Gallaher

Graduate Theses and Dissertations

Conservation of animal populations requires knowledge of their habitat and spatial needs. Quantifying spatial requirements involves the analysis of home range. We examined the effects of sex, body size (SVL), body condition (log mass/log SVL), and year on home range in Timber Rattlesnakes (Crotalus horridus) in Northwest Arkansas. Individual locality data from an ongoing, 22+ year radio-telemetry study in Madison Co., Arkansas were analyzed using both minimum convex polygon (MCP) and Kernel Density Estimates (KDE). Plots of the number of sequential observations versus home range (MCP and KDE) determined that a minimum of 25 locations per individual per active season …

Effects Of Landscape And Yard Features On Mammals In Residential Yards In Northwest Arkansas, Emily Johansson

Graduate Theses and Dissertations

The human footprint is rapidly expanding, and wildlife habitat is continuously being converted to human residential properties. Most wildlife residing in developing areas are displaced to nearby undeveloped areas. However, some animals can coexist with humans and acquire the necessary resources (food, water, shelter) within the human environment. This may be particularly true when development is low intensity, as in suburban yards. Due to the wide variety in how homeowners utilize their yards, they can be considered individually managed “greenspaces.” These yards can provide a range of food (e.g., bird feeders, compost, gardens), water (bird baths and garden ponds), and …

Ecology, Evolution, And Gene Transfer Between Diatoms And Bacteria, Cory B. Gargas

Graduate Theses and Dissertations

Although photosynthetic macro-eukaryotes (i.e., plants) make up the majority of organic biomass on earth, bacteria are the second largest taxonomic group, by biomass. Bacteria are ubiquitous in our environment, living on, and within, man-made surfaces, natural environments, and eukaryotes themselves. The relationship between bacteria and eukaryotes has existed from the very beginning of eukaryotic life in the form of bacterial endosymbioses that resulted in mitochondria and plastids. Other eukaryote–bacteria relationships have evolved since then, ranging from the beneficial (e.g., mutualistic) to harmful (e.g., parasitic or pathogenic). Understanding these eukaryote–bacteria relationships is key to understanding both the evolution of important ecosystem …

The Role Of Multiracial Identity On Chronic Health Conditions In The U. S.: Evidence From The Behavioral Risk Factor Surveillance Survey, Anna Ruth Jinlong Wahls

Graduate Theses and Dissertations

Abstract Racial identity as it informs health disparities has largely been examined using monoracial groups and a binary framework. This study, informed by critical race theory and stress process theory, investigates the relationship between multiracial identity and health. Data from the 2021 Behavioral Risk Factor Surveillance Survey, a national telephone survey that collects health data on adult aged respondents, will be analyzed using a set of regression techniques. Specifically, the number of chronic health conditions reported by those identifying with more than one race will be compared to the number of conditions reported by monoracial individuals.

Development Of An Intervention For Improving Food Acceptance Of People With Hearing Loss, Sara Esther Jarma Arroyo

Graduate Theses and Dissertations

Hearing loss, defined as the partial or total inability to hear sound in one or both ears, is the most common sensory deficit in adults to date. Approximately 15% of American adults aged 18 and over report some trouble hearing. The impact of hearing loss may be profound, with consequences for the social, functional, and psychological well-being of the person. Surprisingly, very little attention has been paid on whether auditory loss can significantly impact consumers’ sensory perception and overall enjoyment of food. There were four objectives of this dissertation study. Chapter 1 aimed to determine the impacts of hearing loss …