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Advanced Deep Learning Approaches For The Accurate Classification Of Phallaceae Fungi With Explainable Ai, Eda Kumru, Fati̇h Eki̇nci̇, Koray Açici, Ömer Burak Altindal, Mehmet Serdar Güzel, Ilgaz Akata Sep 2025

Advanced Deep Learning Approaches For The Accurate Classification Of Phallaceae Fungi With Explainable Ai, Eda Kumru, Fati̇h Eki̇nci̇, Koray Açici, Ömer Burak Altindal, Mehmet Serdar Güzel, Ilgaz Akata

Turkish Journal of Botany

In this study, deep learning (DL)-based models were developed for the classification of 5 fungal species from the Phallaceae family (Clathrus ruber, Colus hirudinosus, Mutinus caninus, Phallus impudicus, and Pseudocolus fusiformis). ConvNeXT achieved the highest performance with 98% accuracy, 98% precision, 98% recall, and 98% F1-score. EfficientNetB4 and Xception also performed well with 96% accuracy. In contrast, lighter models such as MobileNetV2 and MixNet S showed significantly lower accuracy (84% and 80%, respectively). Among the explainable artificial intelligence (XAI) techniques, gradient-weighted class activation mapping (Grad-CAM) and Integrated Gradients showed that high-accuracy models focus more effectively on biologically meaningful regions. In …


Comparative Pollen Morphology Of The Genus Rhaponticoides Vaill. (Asteraceae) In Türkiye: Implications For Taxonomy And Phylogeny, Foroogh Tavakoli, Gürkan Semi̇z, Batikan Günal, Meryem Bozkurt, Tuna Uysal Sep 2025

Comparative Pollen Morphology Of The Genus Rhaponticoides Vaill. (Asteraceae) In Türkiye: Implications For Taxonomy And Phylogeny, Foroogh Tavakoli, Gürkan Semi̇z, Batikan Günal, Meryem Bozkurt, Tuna Uysal

Turkish Journal of Botany

The main focus of this research is the palynological investigation of Rhaponticoides Vaill. species naturally occurring in Türkiye. Light microscopy and scanning electron microscopy (SEM) were employed to examine the pollen morphology of nine Rhaponticoides species in detail. Hierarchical cluster analysis (HCA) was also conducted to identify closely related species and distinguish the investigated taxa based on palynological traits. The study found that the pollen grains were tricolporate, isopolar, monad, and radially symmetric, with an oblate-spheroidal shape as indicated by the polar/equatorial (P/E) ratio. The pollen measurements derived from the P/E ratio ranged between 0.85 and 1, values associated with …


Comparative Analysis Of The Complete Chloroplast Genome Of The Rare Endemic Palm Pinanga Arinasae Witono From Bali, Indonesia, Ni Putu Sri Asih, Risha Amilia Pratiwi, Istiana Prihatini, Paramita Cahyaningrum Kuswandi, Evy Yulianti, Arief Priyadi Sep 2025

Comparative Analysis Of The Complete Chloroplast Genome Of The Rare Endemic Palm Pinanga Arinasae Witono From Bali, Indonesia, Ni Putu Sri Asih, Risha Amilia Pratiwi, Istiana Prihatini, Paramita Cahyaningrum Kuswandi, Evy Yulianti, Arief Priyadi

Turkish Journal of Botany

Pinanga arinasae is an endangered species endemic to Bali, Indonesia. Our study aims to characterize its chloroplast genome, compare it with other chloroplast genomes, including its phylogenetic position within the Arecoideae subfamily, and identify potential molecular markers. P. arinasae chloroplast genomes characterization involves Illumina-based sequencing, de novo genome assembly, gene annotation, amino acid frequency, codon usage pattern analysis, and Simple Sequence Marker (SSR) identification. Comparative analysis include phylogenetic tree reconstruction, comparison of amino acid frequency, codon usage pattern, SSR number, inverted repeat junction arrangement, genome length, GC content, and gene number. Nucleotide diversity is calculated to identify substitution markers. The …


Erratum To “Anatomical And Palynological Studies On Turkish Primula Taxa (Primulaceae) And Their Taxonomic And Phylogenetic Significance [Turkish Journal Of Botany 49 (4) 2025 325-348 ] ”, Deni̇z Ulukuş, Esengül Özkaymakoğlu, Rebecca Stubbs, Hüseyi̇n Baykal, Kami̇l Coşkunçelebi̇, Osman Tugay, Barbara Keller, Elena Conti, Ferhat Celep Sep 2025

Erratum To “Anatomical And Palynological Studies On Turkish Primula Taxa (Primulaceae) And Their Taxonomic And Phylogenetic Significance [Turkish Journal Of Botany 49 (4) 2025 325-348 ] ”, Deni̇z Ulukuş, Esengül Özkaymakoğlu, Rebecca Stubbs, Hüseyi̇n Baykal, Kami̇l Coşkunçelebi̇, Osman Tugay, Barbara Keller, Elena Conti, Ferhat Celep

Turkish Journal of Botany

This erratum addresses an error concerning Figure 5 in the original published version of this article. During the typesetting process, Figure 5 was partially omitted, resulting in an incomplete figure being published.To correct this oversight and ensure the accuracy of the scholarly record, the complete Figure 5 is provided below for reference.

Link to the original article: https://doi.org/10.55730/1300-008X.2866


Nonoscillatory Solutions Of Third-Order Nonlinear Dynamic Equations: Existence And Nonexistence, Özkan Öztürk, Elvan Akin, Nesli̇han Nesli̇ye Pelen Sep 2025

Nonoscillatory Solutions Of Third-Order Nonlinear Dynamic Equations: Existence And Nonexistence, Özkan Öztürk, Elvan Akin, Nesli̇han Nesli̇ye Pelen

Turkish Journal of Mathematics

This paper investigates a third-order nonlinear dynamic equation on arbitrary time scales, a nonempty closed subset of the real numbers, unifying continuous and discrete analyses. We study the qualitative behavior of nonoscillatory solutions and their quasi-derivatives, focusing on their limiting behaviors. The existence of such solutions are established using improper integral criteria and Schauder’s and Knaster’s fixed point theorems. In addition, we establish the criteria for the nonexistence of nonoscillatory solutions. Furthermore, we prove the existence of Kneser-type solutions of the corresponding linear dynamic equation on isolated time scales, addressing an open problem in the literature. Several examples of theoretical …


Effects Of Storage Temperatures On Quality And Phytochemical Properties Of The Hawthorn (Crataegus Azarolus L.) During Storage And Shelf Life, Ahmet Erhan Özdemi̇r, Oğuzhan Çalişkan, Safder Bayazit, Kazi̇m Gündüz, Nurdan Tuna Güneş, Zafer Karaşahi̇n, Derya Kiliç, Ramazan Bestami̇ Karahan Aug 2025

Effects Of Storage Temperatures On Quality And Phytochemical Properties Of The Hawthorn (Crataegus Azarolus L.) During Storage And Shelf Life, Ahmet Erhan Özdemi̇r, Oğuzhan Çalişkan, Safder Bayazit, Kazi̇m Gündüz, Nurdan Tuna Güneş, Zafer Karaşahi̇n, Derya Kiliç, Ramazan Bestami̇ Karahan

Turkish Journal of Agriculture and Forestry

This study aimed to investigate the effects of storage temperature on the quality and phytochemical characteristics in Sultan hawthorn cultivar during cold storage and shelf life. Fruits were stored at 0 ± 0.5 °C and 4 ± 0.5 °C and 90 ± 5% relative humidity (RH) for 6 months in cold storage and were analyzed every month. In addition, hawthorn fruits were kept at 20 ± 0.5 °C and 75 ± 5% RH for 7 days, and their shelf life was investigated at monthly intervals. Weight loss, appearance, the incidence of physiological disorders and fungal decay, fruit skin color, firmness, …


Monitoring The Developmental Stages Of Calendula Officinalis L. Nutrients Efficacy Under Hot Weather Mitigation Through Nutrients In Haripur, Pakistan, Waseem Ahmed, Rafia Azmat, Shah Masaud Khan, Abdul Qayyum, Waseem Hassan, Adnan Noor Shah, Muhammad Hadi Abbas, Fatima M. Abbas, Tahani A.Y. Asseri, Ahmet Hakan Ürüşan Aug 2025

Monitoring The Developmental Stages Of Calendula Officinalis L. Nutrients Efficacy Under Hot Weather Mitigation Through Nutrients In Haripur, Pakistan, Waseem Ahmed, Rafia Azmat, Shah Masaud Khan, Abdul Qayyum, Waseem Hassan, Adnan Noor Shah, Muhammad Hadi Abbas, Fatima M. Abbas, Tahani A.Y. Asseri, Ahmet Hakan Ürüşan

Turkish Journal of Agriculture and Forestry

This study examines the effect of different doses of N and P fertilizer on Calendula officinalis L. (marigold) during the hot weather in summer (May–July) in Pakistan. The aim was to determine whether fertilization can help minimize the impacts of climate change. During the summer peak seasons (May, June, and July), the trial was conducted in potted plants with different N and P application levels to monitor the quality and quantity of C. officinalis. The results showed that the interactive effects (N × P) gave higher values for plant height, number of leaves, fresh weight, leaf length, and number of …


Chemical Weed Control Strategies For Sweet Corn In Türkiye’S Diverse Production Areas, Zübeyde Fi̇li̇z Arslan, Ahmet Uludağ, Hüseyi̇n Güngör, Ti̇muçi̇n Taş, Emi̇ne Aydin, Martin M. Williams Ii Aug 2025

Chemical Weed Control Strategies For Sweet Corn In Türkiye’S Diverse Production Areas, Zübeyde Fi̇li̇z Arslan, Ahmet Uludağ, Hüseyi̇n Güngör, Ti̇muçi̇n Taş, Emi̇ne Aydin, Martin M. Williams Ii

Turkish Journal of Agriculture and Forestry

Sweet corn production in Türkiye is failing to match growing demand from consumers and the food industry. Weeds severely limit sweet corn production, yet only a single herbicide is registered in Türkiye. Due to labor costs, hand weeding is no longer affordable and growers are demanding cost-effective weed control strategies for sweet corn production. Nine treatments including preemergence (PRE) and/or postemergence (POST) herbicides were tested across the country’s diverse growing environments. Compared to the weedy control, all treatments increased the number of marketable ears. Only two treatments—s-metolachlor plus terbuthylazine followed by isoxaflutole plus cyprosulfamide plus theincarbazone-methyl and dimethenamid followed by …


Cover And Contents Aug 2025

Cover And Contents

Turkish Journal of Agriculture and Forestry

No abstract provided.


Green Synthesis Of Silver Nanoparticles From Melanoleuca Grammopodia: Changes In Bioactive Components, Antidiabetic Properties And Bioaccessibility, İsmai̇l Acar, Emi̇ne Okumuş, Arzu Karataş Aug 2025

Green Synthesis Of Silver Nanoparticles From Melanoleuca Grammopodia: Changes In Bioactive Components, Antidiabetic Properties And Bioaccessibility, İsmai̇l Acar, Emi̇ne Okumuş, Arzu Karataş

Turkish Journal of Agriculture and Forestry

Green synthesis of silver nanoparticles (AgNPs) using plant materials allows the production of low-cost and biocompatible nanoparticles without the use of toxic compounds or solvents. In this study, biogenic AgNP/Mg nanoparticles were synthesized using the Melanoleuca grammopodia mushroom. Vitamin C and E contents of the mushroom were 42.6 mg/g and 26.82 mg/g, respectively. FTIR analysis revealed the reducing and stabilizing effects of bioactive components present in M. grammopodia mushroom extract. SEM micrographs showed that the nanoparticles were spherical in form and the EDX spectrum confirmed the presence of the characteristic metallic silver peak at 3.0 keV. A significant reduction in …


Design And Structural Optimization Of Acceleration Pipe For Mhd Accelerated Jujube Air-Suction Harvester, Yi Wang, Jing Nie, Jingbin Li, Longpeng Ding, Xuewei Chao, Xianfei Wang Aug 2025

Design And Structural Optimization Of Acceleration Pipe For Mhd Accelerated Jujube Air-Suction Harvester, Yi Wang, Jing Nie, Jingbin Li, Longpeng Ding, Xuewei Chao, Xianfei Wang

Turkish Journal of Agriculture and Forestry

The combination of magnetohydrodynamic (MHD) acceleration technology and the negative pressure suction principle ensures the effective lifting and transport of jujube fruits, addressing the challenges of traditional harvesting methods and providing a new solution for improving jujube harvesting efficiency. This study focuses on the impact of key parameters, including pipe diameter, electrode plate length, and electrode positioning, on the performance of the MHD acceleration pipe through numerical simulations. The structural optimization of the MHD acceleration pipe in the air-suction jujube harvester aims to enhance airflow acceleration efficiency. The results from both numerical simulations and experimental studies indicate that: 1) a …


Insights From Multivariate Analysis Of Seed Vigor Traits In Rapeseed And Mustard (Brassica Spp.) Genotypes, Ayushi Yadav, Shiv Kumar Yadav, Ravish Choudhary, Sushma Mudlupura Kumar, Anbalagan Anumantharaj, Rakesh Bharadwaj, Rashmi Yadav, Yashpal Taak, Navinder Saini, Sneha Adhikari, Sangita Yadav Aug 2025

Insights From Multivariate Analysis Of Seed Vigor Traits In Rapeseed And Mustard (Brassica Spp.) Genotypes, Ayushi Yadav, Shiv Kumar Yadav, Ravish Choudhary, Sushma Mudlupura Kumar, Anbalagan Anumantharaj, Rakesh Bharadwaj, Rashmi Yadav, Yashpal Taak, Navinder Saini, Sneha Adhikari, Sangita Yadav

Turkish Journal of Agriculture and Forestry

Rapeseed and mustard (Brassica spp.) are critical oilseed crops contributing significantly to global edible oil production. In India, Indian mustard (Brassica juncea) dominates Brassica cultivation, yet the country remains heavily dependent on edible oil imports due to insufficient domestic production. Enhancing seed vigor, a key determinant of crop establishment and yield, offers a promising avenue for improving productivity. This study assessed the genetic diversity of 300 rapeseed and mustard genotypes for seed vigor traits using multivariate analysis, including principal component analysis (PCA) and cluster analysis. Eleven seed vigor-related traits were evaluated, and PCA revealed four principal components with eigenvalues greater …


Effects Of Polyethylene Films With Different Uv-A Transmittance On Quality Parameters And Physiology Of Greenhouse-Grown Tomato, Nefi̇se Yasemi̇n Tezcan, Mustafa Erkan, Ahmet Kurunç Aug 2025

Effects Of Polyethylene Films With Different Uv-A Transmittance On Quality Parameters And Physiology Of Greenhouse-Grown Tomato, Nefi̇se Yasemi̇n Tezcan, Mustafa Erkan, Ahmet Kurunç

Turkish Journal of Agriculture and Forestry

In this study, the effects of three different polyethylene (PE) greenhouse covering materials (CMs) with varying thicknesses and ultraviolet-A (UV-A) transmittance on greenhouse microclimate, plant growth, yield, fruit quality, and chlorophyll fluorescence parameters (Chl FPs) in tomatoes were investigated. The CMs used in the study were 180 μm thick ultraviolet (UV) + ethylene vinyl acetate (EVA) + long-wave infrared (IR) + light diffuser (LD) + antifog (AF) added PE (CM1), 160 μm thick PLUS UV + EVA + IR + LD + AF added PE (CM2), and 200 μm thick UV + EVA + IR + LD added PE (CM3). …


Exploring The Genetic Diversity And Population Structure Of Serbian And Selected European Bread Wheat Cultivars Through Ipbs-Retrotransposon Markers, Rada Šućur, Amjad Ali, Parnaz Mortazavi, Muhammad Tanveer Altaf, Muhammed Tatar, Muhammad Azhar Nadeem, Bojan Jocković, Velimir Mladenov, Sotirios Fragkostefanakis, Yong Suk Chung, Faheem Shehzad Baloch Aug 2025

Exploring The Genetic Diversity And Population Structure Of Serbian And Selected European Bread Wheat Cultivars Through Ipbs-Retrotransposon Markers, Rada Šućur, Amjad Ali, Parnaz Mortazavi, Muhammad Tanveer Altaf, Muhammed Tatar, Muhammad Azhar Nadeem, Bojan Jocković, Velimir Mladenov, Sotirios Fragkostefanakis, Yong Suk Chung, Faheem Shehzad Baloch

Turkish Journal of Agriculture and Forestry

Bread wheat is a globally vital crop, sustaining millions and contributing to food security. The present study investigated the molecular characterization of 60 bread wheat accessions, using 12 interprimer binding site (iPBS) retrotransposon markers, which yielded a total of 260 distinct bands. Out of the 260 bands, 42 were monomorphic while the remaining 218 (83.84%) were polymorphic, with polymorphism information content values ranging from 0.38 to 0.45. Genetic diversity indices, including Shannon’s information index (I = 0.01–0.53), effective number of alleles (Ne = 1.00–1.63), gene diversity (He = 0.0037–0.36), and marker index (MI = 0.31– 0.51), revealed moderate variability across …


Innovative Approaches To Estimating Sessile Oak Stem Volume: Comparing Additive Models And Ensemble Machine Learning, Maria J. Diamantopoulou, Abbas Şahi̇n, Ramazan Özçeli̇k Aug 2025

Innovative Approaches To Estimating Sessile Oak Stem Volume: Comparing Additive Models And Ensemble Machine Learning, Maria J. Diamantopoulou, Abbas Şahi̇n, Ramazan Özçeli̇k

Turkish Journal of Agriculture and Forestry

Sessile oak is an important deciduous forest tree species across Türkiye and Europe. Estimating individual tree and stand volumes is essential for growth and yield models, as these predictions play a critical role in assessing forest management, economics, and fire risk. In pursuit of this goal, nonlinear seemingly unrelated regression (NSUR) was used for the simultaneous fitting of stem volume components, and compared to three ensemble machine learning techniques: gradient boosting regression (GBr), XGBoost regression (XGBr), and random forest regression (RFr). NSUR accounts for correlations between error terms across different equations, leading to more efficient parameter estimates than if each …


Comprehensive Study Of Imidazole-Based Hydrazones: From Design, Synthesis, And Characterization To In Vitro And In Silico Antiproliferative Activity Analysis, Ömer Di̇lek Aug 2025

Comprehensive Study Of Imidazole-Based Hydrazones: From Design, Synthesis, And Characterization To In Vitro And In Silico Antiproliferative Activity Analysis, Ömer Di̇lek

Turkish Journal of Chemistry

The aim of this study was to synthesize novel imidazole-cored hydrazones and investigate their cytotoxic activities against human breast and lung cancer cell lines using in vitro and in silico techniques. For this purpose, 5 novel compounds (6 and 7a–7d) were synthesized. The structures of the synthesized compounds were confirmed using spectroscopic methods. The cytotoxic effects were evaluated against human lung (A549) and breast (MCF-7) cancer cell lines using the MTT assay. All synthesized compounds had higher cytotoxic activity against MCF-7 cells (IC50 < 9.262 μM) than the control drug cisplatin. However, their cytotoxic activity against A549 cells (IC50 > 2.605 μM) was lower than that of cisplatin. Except for compound 7d in the A549 cell line, …


A Decision Model For Enhancing Reaction Yield: Pd(Ii) And Pt(Ii) Metal Insertion To Free Porphyrin, Özay Özaydin, Emel Önal Aug 2025

A Decision Model For Enhancing Reaction Yield: Pd(Ii) And Pt(Ii) Metal Insertion To Free Porphyrin, Özay Özaydin, Emel Önal

Turkish Journal of Chemistry

Chemical synthesis experiments are crucial for developing new materials, yet their inherent complexity and variability often lead to suboptimal results, causing significant resource and time wastage. This study proposes a novel decision support model to enhance the success rate of macromolecule synthesis experiments for sensor applications. The model leverages principles of experimental design and decision-making. We identified synthesis alternatives through a literature review and expert consultations, narrowing it down to 6 alternatives for metal salts, 3 for reactant mole ratios, 5 for organic solvents, 3 for reaction temperatures, and 4 for reaction times. Considering the time and cost constraints, this …


Synthesis, Characterization, And Drug Release Properties Of Enzyme-Responsive Oxamide-Bridged Mesoporous Organosilica Nanoparticles, Yaşar Gök, Hali̇l Zeki̇ Gök, Osman Tayyar Arli, Tuğçe Türkaslan Aug 2025

Synthesis, Characterization, And Drug Release Properties Of Enzyme-Responsive Oxamide-Bridged Mesoporous Organosilica Nanoparticles, Yaşar Gök, Hali̇l Zeki̇ Gök, Osman Tayyar Arli, Tuğçe Türkaslan

Turkish Journal of Chemistry

In this study, we report a novel enzyme-responsive mesoporous organosilica nanocarrier (MON) and its drug delivery properties in the presence of the trypsin enzyme. The mesoporous organosilica nanocarrier was synthesized by using the oxamide bridged bissilyl compound (2) and 1,4-bis(triethoxysilyl)benzene (BTSB). To compare the enzyme responsiveness of MON, the reference periodic mesoporous organosilica (PMO) nanocarrier was also synthesized using BTSB only. The structural determinations of the synthesized organic compounds were carried out by 1H, 13C-NMR, FT-IR, and MS, while FT-IR, XRD, SEM, EDS, transmission electron microscopy (TEM), TGA, and N2 sorption analyses were used for the characterization of MON and …


A Disposable Biosensing System For Analysis Of Ca125 In Real Human Serum Samples, Meltem Afşar, Berfi̇n Vural, Meli̇ke Bi̇lgi̇ Kamaç, Mustafa Kemal Sezgi̇ntürk Aug 2025

A Disposable Biosensing System For Analysis Of Ca125 In Real Human Serum Samples, Meltem Afşar, Berfi̇n Vural, Meli̇ke Bi̇lgi̇ Kamaç, Mustafa Kemal Sezgi̇ntürk

Turkish Journal of Chemistry

Several biomarkers have been developed to track the development of ovarian cancer and identify the illness at an early stage. A promising development for ovarian cancer is using cancer antigen 125 (CA125). The objective of this work is to identify the CA125 marker by utilizing an indium tin oxide polyethylene electrode. The advantage of the designed biosensor is that it is very cheap, disposable, practical, and easy to use. The necessary parameters for the developed biosensor have been optimized in detail. Repeatability, reproducibility, regeneration, storage, and selectivity studies have been completed to characterize the proposed biosensor. Electrochemical impedance spectroscopy and …


Theoretical Study On Electronic And Optoelectronic Properties Of Some C^N^N- And C^C^C-Chelated Iridium(Iii) Complexes For Oleds, Ayhan Üngördü Aug 2025

Theoretical Study On Electronic And Optoelectronic Properties Of Some C^N^N- And C^C^C-Chelated Iridium(Iii) Complexes For Oleds, Ayhan Üngördü

Turkish Journal of Chemistry

The electronic and optoelectronic properties of 8 C∧N∧N- and C∧C∧C-chelated Ir(III) complexes were investigated using density functional theory at the Becke-style 3-parameter Lee-Yang-Par and triple zeta plus polarization level. Based on reorganization energy calculations, complex 7 was identified as a promising ambipolar material, while complexes 1 and 2 had efficient hole transport properties. Complex 8 had low ionization potential and is therefore a strong candidate for hole transport applications. Complex 4 had high electron affinity and therefore has potential as an effective electron acceptor material. Photophysical analysis showed that all complexes had phosphorescent properties, with complexes 5 and 6 showing …


Evaluation Of Rheumatic Etiologies Underlying Childhood-Onset Arthritis, Seher Şener, Erdal Atalay, Ezgi̇ Deni̇z Batu, Cansu Ayten Tatar, Özge Başaran, Yelda Bi̇lgi̇ner, Seza Özen Aug 2025

Evaluation Of Rheumatic Etiologies Underlying Childhood-Onset Arthritis, Seher Şener, Erdal Atalay, Ezgi̇ Deni̇z Batu, Cansu Ayten Tatar, Özge Başaran, Yelda Bi̇lgi̇ner, Seza Özen

Turkish Journal of Medical Sciences

Background/aim: Childhood-onset arthritis may result from various rheumatic diseases. This study aimed to systematically evaluate their distribution and characteristics in a large pediatric cohort.

Materials and methods: We retrospectively analyzed all pediatric patients who presented with arthritis to the pediatric rheumatology clinic between January 2000 and January 2023.

Results: A total of 1713 pediatric patients who presented with arthritis were included in this study (median age at diagnosis: 6.8 years; F/M = 1.2). Most of the patients (n = 859, 50.1%) had juvenile idiopathic arthritis (JIA) (especially oligoarticular JIA). Patients with familial Mediterranean fever, comprising 277 individuals (16.2%) presented with …


Evaluation Of Metabolic Uptake In Gynecological Organs Using Fdg-Pet In Women Diagnosed With Non-Gynecological Malignancies, Funda Atalay, Uğurcan Zorlu, Koray Aslan, Fatma Batak, Tuba Zengi̇n Aksel, Güli̇n Uçmak Aug 2025

Evaluation Of Metabolic Uptake In Gynecological Organs Using Fdg-Pet In Women Diagnosed With Non-Gynecological Malignancies, Funda Atalay, Uğurcan Zorlu, Koray Aslan, Fatma Batak, Tuba Zengi̇n Aksel, Güli̇n Uçmak

Turkish Journal of Medical Sciences

Background/aim: Gynecological malignancies, including those affecting the uterus, cervix, vagina, vulva, and adnexa, pose significant physical and psychosocial burdens. Early detection and effective management of these malignancies are critical for improving outcomes. This study aims to evaluate metabolic uptake patterns in gynecological organs using fluorodeoxyglucose positron emission tomography (FDG-PET) and to analyze their malignancy potential in women with nongynecological cancers.

Materials and methods: A retrospective analysis was conducted on 221 women with nongynecological malignancies who exhibited pathological FDG uptake in gynecological organs on FDG-PET/CT imaging. Lesions were evaluated based on the standardized uptake value maximum (SUVmax), morphological characteristics on contrast-enhanced …


Ultrasonographic And Elastographic Evaluation Of Plantar Fascia And Achilles Tendon Alterations In Type 2 Diabetes Mellitus, Rifat Bozkuş, İhsani̇ye Süer Doğan, Berna Turhan, Sümeyya Duran Kaymak, Mustafa Hulusi̇ Kurt, Rasi̇me Peli̇n Kavak Aug 2025

Ultrasonographic And Elastographic Evaluation Of Plantar Fascia And Achilles Tendon Alterations In Type 2 Diabetes Mellitus, Rifat Bozkuş, İhsani̇ye Süer Doğan, Berna Turhan, Sümeyya Duran Kaymak, Mustafa Hulusi̇ Kurt, Rasi̇me Peli̇n Kavak

Turkish Journal of Medical Sciences

Background/aim: The primary aim of this study is to compare the thickness and stiffness of the PF and AT between healthy volunteers and patients with type 2 diabetes mellitus (T2DM). A secondary objective is to explore the correlations between the thickness and stiffness of the PF and AT with diabetes duration (in months) and hemoglobin A1c (HbA1c) levels in T2DM patients without peripheral neuropathy or foot ulcers, with peripheral neuropathy or with foot ulcers.Material and Methods: A total of 289 participants, including 117 healthy volunteers (Group A) and 172 T2DM patients (59.5%), matched for age, sex, and body mass index, …


Detection And Quantification Of Microplastics In Cerumen, Bengi̇ Arslan, Yüce İslamoğlu, Ali̇ Sami̇ Berçi̇n, Selen Akbulut, Mehmet Meli̇koğlu Aug 2025

Detection And Quantification Of Microplastics In Cerumen, Bengi̇ Arslan, Yüce İslamoğlu, Ali̇ Sami̇ Berçi̇n, Selen Akbulut, Mehmet Meli̇koğlu

Turkish Journal of Medical Sciences

Background/aim: Microplastics (MPs) are a growing concern due to their pervasive environmental presence and potential environmental and human exposure impacts. Given evidence of systemic MP presence in human tissues and fluids, and the ear canal's environmental exposure, this novel study aimed to identify these particles in human cerumen. Cerumen was collected from the proximal ear canal to minimize potential airborne contamination.

Materials and methods: Cerumen samples were prospectively collected from 12 adult patients (23 patient-derived specimens) and 3 control water samples, following ethical approval and consent. Samples were extracted using sterile instruments, stored in glass, diluted, and filtered through 0.22 …


Are Paraplegic Wheelchair Users Vulnerable To Overuse Syndromes?, Kutay Tezel, Esra Ülgen Kiratlioğlu, Hüseyi̇n Kayadi̇bi̇, İlkay Karabay, Mi̇tat Cebeci̇, Eda Gürçay Aug 2025

Are Paraplegic Wheelchair Users Vulnerable To Overuse Syndromes?, Kutay Tezel, Esra Ülgen Kiratlioğlu, Hüseyi̇n Kayadi̇bi̇, İlkay Karabay, Mi̇tat Cebeci̇, Eda Gürçay

Turkish Journal of Medical Sciences

Background and Aims: The purposes of this study are to determine the frequency of upper extremity overuse syndromes in patients with spinal cord injury (SCI) using manual wheelchairs, to evaluate them clinically and sonographically, and to reveal possible factors that predispose to overuse syndromes.

Materials and methods: A total of 38 traumatic SCI patients who were over 18 years of age and manual wheelchair users were enrolled in this cross-sectional study. The patients were evaluated with clinical and sonographic findings of the wrist, elbow and shoulder joints. Functional capacity, physical ability and symptoms of upper extremity, and quality of …


Prognostic Role Of Systemic Immune-Inflammation Index And Pan-Immune-Inflammation Value In Acute Methanol Poisoning, Hati̇ce Şahi̇n, Gülay Ulusal Okyay, Fatma Ayerden Ebi̇nç, Fevzi̇ Coşkun Sökmen, Emre Yaşar, Gülşen Akçay, Mehmet Deni̇z Ayli Aug 2025

Prognostic Role Of Systemic Immune-Inflammation Index And Pan-Immune-Inflammation Value In Acute Methanol Poisoning, Hati̇ce Şahi̇n, Gülay Ulusal Okyay, Fatma Ayerden Ebi̇nç, Fevzi̇ Coşkun Sökmen, Emre Yaşar, Gülşen Akçay, Mehmet Deni̇z Ayli

Turkish Journal of Medical Sciences

Background/aim: Acute methanol poisoning (MP) poses a significant public health challenge, with inflammation increasingly recognized as a key factor in its pathophysiology. Identifying accessible and reliable prognostic biomarkers could help enhance clinical outcomes. This study aimed to assess the prognostic value of the Systemic Immune-Inflammation Index (SII) and the Pan-Immune-Inflammation Value (PIV), measured upon emergency department admission, in predicting in-hospital mortality in patients with acute MP.Material and methods: This retrospective study included patients diagnosed with acute MP at two tertiary care centers in Ankara, Türkiye [University of Health Sciences Dışkapı Yıldırım Beyazıt Education and Research Hospital (January 1, 2015–October 1, …


Mirna-Target Gene Network Analysis In Siblings With Cystic Fibrosis And Phenotypic Variability, Ayberk Mustafaoğlu, Senem Noyan, Yeli̇z Z. Akkaya Ulum, Bala Gür Dedeoğlu, Nagehan Emi̇rali̇oğlu, Uğur Özçeli̇k, Ebru Yalçin, Deni̇z Doğru, Nural Ki̇per, Di̇dem Dayangaç Erden Aug 2025

Mirna-Target Gene Network Analysis In Siblings With Cystic Fibrosis And Phenotypic Variability, Ayberk Mustafaoğlu, Senem Noyan, Yeli̇z Z. Akkaya Ulum, Bala Gür Dedeoğlu, Nagehan Emi̇rali̇oğlu, Uğur Özçeli̇k, Ebru Yalçin, Deni̇z Doğru, Nural Ki̇per, Di̇dem Dayangaç Erden

Turkish Journal of Medical Sciences

Background/aim: Cystic fibrosis (CF) is an autosomal recessive disease caused by mutations in the cystic fibrosis transmembrane conductance regulator (CFTR) gene. CF is characterized by respiratory tract infections, pancreatic insufficiency, meconium ileus, intestinal obstruction, and male infertility. A genotype to phenotype correlation is difficult to establish because of the heterogeneity of disease severity. Even patients with the same CFTR mutation can have varying clinical severities. In recent years, studies have explored the role of microRNA (miRNA) expression in the regulation of respiratory diseases. However, no research has been conducted to date on miRNAs in siblings with the same CFTR mutation. …


Metabolic And Genotypic Characterization Of Meropenem Susceptible And Resistant Serratia Marcescens Isolates, Şeyma Ni̇gi̇z, Gülşen Hazirolan, Gülşen Altinkanat Gelmez, Ceren Özkul Koçak, Engi̇n Koçak, Sevi̇lay Erdoğan Kablan, Emi̇rhan Nemutlu, Aycan Gündoğdu, Fatma Bayrakdar, Ufuk Hasdemi̇r, Deni̇z Gür Aug 2025

Metabolic And Genotypic Characterization Of Meropenem Susceptible And Resistant Serratia Marcescens Isolates, Şeyma Ni̇gi̇z, Gülşen Hazirolan, Gülşen Altinkanat Gelmez, Ceren Özkul Koçak, Engi̇n Koçak, Sevi̇lay Erdoğan Kablan, Emi̇rhan Nemutlu, Aycan Gündoğdu, Fatma Bayrakdar, Ufuk Hasdemi̇r, Deni̇z Gür

Turkish Journal of Medical Sciences

Background/aim: Serratia marcescens which is a nosocomial pathogen, is naturally resistant to a wide spectrum of antibiotics, which makes the management of infections difficult. The aim of this study was to determine the in vitro susceptibilities of S. marcescens to ceftriaxone, ceftazidime, meropenem, amikacin, gentamicin, ciprofloxacin, and to compare the metabolic profiles of meropenemresistant isolates under basal conditions and after exposure to sublethal concentrations of meropenem.

Materials and methods: A total of 84 S. marcescens isolates were included from various samples. Genes for meropenem resistance were determined by polymerase chain reaction (PCR). Genetic similarities among isolates of S. marcescens were …


Letter To The Editor Regarding “Kılıçarslan A, Kurt Çevik G, Doğan M, Aksoy Altınboğa A, Ceran F, Et Al. Does Cd47 Expression Have Prognostic Significance In Classical Hodgkin Lymphoma? Turkish Journal Of Medical Sciences: 2025; 55 (1): 22”, Burcu Baba, Ayşegül Akbay Aug 2025

Letter To The Editor Regarding “Kılıçarslan A, Kurt Çevik G, Doğan M, Aksoy Altınboğa A, Ceran F, Et Al. Does Cd47 Expression Have Prognostic Significance In Classical Hodgkin Lymphoma? Turkish Journal Of Medical Sciences: 2025; 55 (1): 22”, Burcu Baba, Ayşegül Akbay

Turkish Journal of Medical Sciences

No abstract provided.


Sinapic Acid Alleviates Renal Ischemia-Reperfusion Injury By Regulating Oxidative Stress, Apoptosis, And Inflammation, Mustafa Can Güler, Fazi̇le Nur Eki̇nci̇ Akdemi̇r, Ersen Eraslan, Ayhan Tanyeli̇, Derya Güzel Erdoğan, Behzat Tebri̇zi̇ Aug 2025

Sinapic Acid Alleviates Renal Ischemia-Reperfusion Injury By Regulating Oxidative Stress, Apoptosis, And Inflammation, Mustafa Can Güler, Fazi̇le Nur Eki̇nci̇ Akdemi̇r, Ersen Eraslan, Ayhan Tanyeli̇, Derya Güzel Erdoğan, Behzat Tebri̇zi̇

Turkish Journal of Medical Sciences

Background/aim: Acute kidney injury (AKI) is a major clinical issue, frequently resulting from ischemia-reperfusion (I/R) injury. Sinapic acid (SA), a natural phenolic molecule included in numerous plant-based foods, exhibits antiapoptotic, antioxidant, and antiinflammatory properties. This study aimed to investigate the renoprotective effects of SA in an I/R-induced acute kidney injury (AKI) model.

Materials and methods: Sprague–Dawley male rats (n = 32) were randomly assigned to four groups: sham, I/R, SA 20 mg/kg, and SA 40 mg/kg. SA was administered intraperitoneally before reperfusion. Renal tissues were examined using biochemical, histopathological, and immunohistochemical methods, focusing on oxidative stress, cytokine expression, and apoptosis …