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Identifying The 5’End Of The Camta1 Genes In Zebrafish, Morgan Fronk Jul 2018

Identifying The 5’End Of The Camta1 Genes In Zebrafish, Morgan Fronk

Undergraduate Honors Theses

Congenital heart diseases (CHDs) are a significant cause of infant death and are frequently caused by mutations in transcription factors. Camta1 (calmodulin binding transcription activator 1) is a transcription factor that has been proposed as a modulator in embryonic heart development and a possible cause of CHDs. The only other known member of its family in vertebrates is involved in activating a hypertrophy gene program in adult heart failure. Unlike camta2, camta1 is expressed in the embryonic heart during heart looping. However, few studies have been done on camta1. In zebrafish, there are two camta1 ohnologs (homologs created through …

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Teaching Computational Thinking And Coding Education Basics To Early Childhood Educators, Enoch Hunsaker Jul 2018

Teaching Computational Thinking And Coding Education Basics To Early Childhood Educators, Enoch Hunsaker

Instructional Psychology and Technology Graduate Student Projects

The purpose of this project was to design and develop training, assessment, and credentials to help inservice and preservice teachers connected to Brigham Young University (BYU) to become competent in teaching computational thinking (CT) and coding in their classrooms. In accordance with the needs and desires of the stakeholders, the assessments for the project took the form of open badges, and the training consisted of corresponding tutorials to assist individuals earning those badges. The badges, tutorials, and some related resources were compiled onto the Tech with Kids website (https://iptedtec.wixsite.com/techwithkids) to make them accessible for all target learners.

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Lacustrine Spawning By Mountain Suckers (Catostomus Platyrhynchus) On Boulder Mountain, Utah, Martin C. Arostegui Jul 2018

Lacustrine Spawning By Mountain Suckers (Catostomus Platyrhynchus) On Boulder Mountain, Utah, Martin C. Arostegui

Western North American Naturalist

Facultative spawning in lakes is an uncommon and notable behavior among catostomids and other fish species that typically spawn in streams. I describe what may be the first documented case of lake-spawning behavior by mountain suckers (Catostomus platyrhynchus).


El desove facultativo en los lagos es un comportamiento poco común y notable entre los catostomidos y otras especies de peces que típicamente desovan en los arroyos. Describo cuál puede ser el primer caso documentado del comportamiento de desove en un lago por los matalotes del montaña (Catostomus platyrhynchus).

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New Records Of Tricolored Bats (Perimyotis Subflavus) In Colorado, With First Evidence Of Reproduction, Rick A. Adams, Burton Stoner, Donna Nespoli, Sarah M. Bexell Jul 2018

New Records Of Tricolored Bats (Perimyotis Subflavus) In Colorado, With First Evidence Of Reproduction, Rick A. Adams, Burton Stoner, Donna Nespoli, Sarah M. Bexell

Western North American Naturalist

The tricolored bat (Perimyotis subflavus) is widely distributed throughout eastern North America. However, this species has also undergone severe population declines in areas where white-nose syndrome has taken hold. Previous records in Colorado showed what appeared to be vagrant individuals with no evidence of established populations. Herein we provide new records for Boulder and Weld Counties, Colorado. We also provide evidence of reproduction supporting the hypothesis of westward expansion of this species. Because the tricolored bat has been significantly impacted by white-nose syndrome in eastern North America, the Rocky Mountain West may provide at least a temporary refugium …

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Teaching The Doctrine Of The Family: A South African Example, Khumbulani D. Mdletshe, Michael A. Goodman Jul 2018

Teaching The Doctrine Of The Family: A South African Example, Khumbulani D. Mdletshe, Michael A. Goodman

Religious Educator: Perspectives on the Restored Gospel

Early in 2015, I visited my aunt’s home. She lives in one of the largest townships in South Africa, an urban residential area with a predominantly black African population. Townships often have higher unemployment, greater poverty, and younger populations than other areas in South Africa. Townships also tend to have higher levels of risk behaviors such as drug abuse, unprotected sex, and crime. This was my first visit to my aunt’s home in five years. As I entered the home, I noticed some young people I had never met. My aunt, who is in her early sixties, began to introduce …

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Full Issue Jul 2018

Full Issue

Religious Educator: Perspectives on the Restored Gospel

No abstract provided.

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Measuring The Interaction And Cooperativity Between Ionic, Aromatic, And Nonpolar Amino Acids In Protein Structure, Mason Scott Smith Jul 2018

Measuring The Interaction And Cooperativity Between Ionic, Aromatic, And Nonpolar Amino Acids In Protein Structure, Mason Scott Smith

Theses and Dissertations

Protein folding studies have provided important insights about the key role of non-covalent interactions in protein structure and conformational stability. Some of these interactions include salt bridges, cation-π, and anion-Ï€ interactions. Understanding these interactions is crucial to developing methods for predicting protein secondary, tertiary, quaternary structure from primary sequence and understanding protein-protein interactions and protein-ligand interactions. Several studies have described how the interaction between two amino acid side chains have a substantial effect on protein structure and conformational stability. This is under the assumption that the interaction between the two amino acids is independent of surrounding interactions. We are interested …

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Adverse Childhood Experiences (Aces) And Timely Bachelor's Degree Attainment, Carolina Otero Jul 2018

Adverse Childhood Experiences (Aces) And Timely Bachelor's Degree Attainment, Carolina Otero

Theses and Dissertations

It is well established that adverse childhood experiences (ACEs) are linked to health and emotional outcomes. But less is known about the relationship between ACEs and educational attainment—a potentially important feature of educational stratification in America. Using the National Longitudinal Study of Adolescent to Adult Health (Add Health), a nationally representative youth study of 7-12th grade students in the 1994-95 school year, I investigate whether ACEs is linked to post-secondary attainment and examine the role of health and socio-emotional factors as mediators. Results confirm that there is a graded relationship between ACEs and timely bachelor's degree attainment. I find that …

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The Diversity Found Among Carbapenem-Resistant Bacteria, Galen Edward Card Jul 2018

The Diversity Found Among Carbapenem-Resistant Bacteria, Galen Edward Card

Theses and Dissertations

This work will look at two factors that add to the diversity of carbapenem resistant bacteria. First, it focuses on the diversity of carbapenemase resistance plasmids. 446 plasmids were characterized by size, gene content and replicon groups. We identified that on average, over 30% of the encoded proteins on each plasmid have an unknown function. Plasmid sizes ranged from 1.6kb to 500kb, with an average of around 100kb and median of 80kb. Additionally, six replicon groups account for 80% of all the carbapenemase resistance plasmids. We also highlight the lack of data available for carbapenemase carrying plasmids from bacterial genera …

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Uniting And Dividing Influences Of Religion On Familial Relationships, Heather Howell Kelley Jul 2018

Uniting And Dividing Influences Of Religion On Familial Relationships, Heather Howell Kelley

Theses and Dissertations

Previous research suggests that religion can be both helpful and harmful. However, much of the research on religion and families has employed relatively simple, distal measures of religion and has predominantly focused on only one side of the dualistic nature of religion. Drawing upon interviews with 198 religious families (N = 476 individuals), the purpose of this study is to better understand how religion can have both a unifying and a dividing influence on familial relationships. Three overarching themes are presented, accompanied by supporting primary qualitative data from participants. These themes include: (1) How religious beliefs unite and divide families; …

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A Content Analysis Of The Journal Of Adolescent Health: Using Past Literature To Guide Healthcare Research Of Us Ethnic Minority Adolescents, Kate Amanda Handy Jul 2018

A Content Analysis Of The Journal Of Adolescent Health: Using Past Literature To Guide Healthcare Research Of Us Ethnic Minority Adolescents, Kate Amanda Handy

Theses and Dissertations

Ethnic minority research in the U.S. is important given the increase in ethnic minority populations, particularly within the adolescent population. Content analyses are useful in guiding researchers as they document representation and progress of research on ethnic minorities within many fields, including healthcare. The Journal of Adolescent Health was coded for the following variables: ethnic minority focus, article topic, article funding by topic, geographic location of sample, and inclusion of measures (ethnic identity and acculturation). The results indicated that the percentage of published articles focused on each specific ethnic minority group were lower than the current U. S. percentages, including …

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The Power Of Three: A Latent Class Analysis Of The Three Parent-Child Relationships In Stepfamilies And Their Influence On Emerging Adult Outcomes, Braquel Rachel Egginton Jul 2018

The Power Of Three: A Latent Class Analysis Of The Three Parent-Child Relationships In Stepfamilies And Their Influence On Emerging Adult Outcomes, Braquel Rachel Egginton

Theses and Dissertations

Research on stepfamilies strongly supports the importance of positive parent-child relationships on child outcomes. However, most of this research has focused on one or two of these relationships failing to acknowledge the interconnected impact of all three parental figures. To fill this gap, I used latent class analysis and identified six classes of parent-child relationship constellations. The national sample in this study (n=1,159) were all participants in The Stepfamily Experiences Project (STEP). Parent-child relationship quality indicators were based on participants' retrospective reports on the warmth/closeness, communication, and level of active parenting they experienced in their stepfamily household. After identifying classes …

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Homogeneous Reaction Kinetics Of Carbohydrates With Viologen Catalysts For Biofuel Cell Applications, Hilary Bingham Jul 2018

Homogeneous Reaction Kinetics Of Carbohydrates With Viologen Catalysts For Biofuel Cell Applications, Hilary Bingham

Theses and Dissertations

Energy usage is continually on the rise and significant efforts are being extended to provide more renewable energy. One area of exploration is the development of fuel cells, which includes biofuel cells that can extract energy from carbohydrates obtained from biomass. Recently, viologen catalysts have been shown to enhance reaction rates of energy extraction and improve carbohydrate conversion efficiencies. However, characterizing the effects of process parameters such as pH, reactant concentrations, and carbohydrate exposure time to buffer solutions with a rigorous model is lacking. This thesis characterizes the homogeneous reaction between carbohydrates and a methyl viologen catalyst to provide insights …

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Difference In Therapeutic Alliance: High-Conflict Co-Parents Vs Regular Couples, Andrea Mae Parady Jul 2018

Difference In Therapeutic Alliance: High-Conflict Co-Parents Vs Regular Couples, Andrea Mae Parady

Theses and Dissertations

The purpose of this research is to explore differences in the therapeutic alliance for High-Conflict Co-Parents (HCC) vs. Regular Couples. Therapeutic alliance refers to the relationship, consisting of a bond, and agreement on the tasks and goals of therapy, between at least two people in the therapeutic relationship. It was hypothesized that HCC clients would have lower therapeutic alliance scores compared to regular couple clients. The results supported this hypothesis. By identifying these differences, more research can be conducted to improve our understanding of how to strengthen the therapeutic alliance with HCC clients, leading to improved treatment of this population.

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Does Dietary Behavior Mediate The Association Between Hedonic Hunger And Bmi In Overweight/Obese Adolescents?, Kirandeep Kaur Jul 2018

Does Dietary Behavior Mediate The Association Between Hedonic Hunger And Bmi In Overweight/Obese Adolescents?, Kirandeep Kaur

Theses and Dissertations

Heightened reward associated with palatable food, a construct referred to as hedonic reward, can promote excessive energy intake among adults. However, no known studies have examined the influence of hedonic reward on adolescents' eating behavior and weight status. The present study examined whether there was an association between hedonic hunger and weight status in overweight/obese adolescents and whether dietary behavior (caloric consumption) mediated this association. Baseline measures of body mass index, hedonic food reward, and dietary intake were collected from one hundred overweight and obese adolescents. Data were analyzed using mixture modeling. Mediation at varying levels of hedonic hunger was …

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Age, Plans To Move, And Perceptions Of Collective Efficacy, Wesley B. Jeffrey Jul 2018

Age, Plans To Move, And Perceptions Of Collective Efficacy, Wesley B. Jeffrey

Theses and Dissertations

There is a growing recognition that to more fully understand the complex dynamics of neighborhoods and communities, we must effectively link the micro- and macro-level dimensions of community processes. As important as collective efficacy at the macro level has been shown to be, literature looking at factors shaping the individual-level experience is relatively scarce. Since the latent community attribute of collective efficacy is largely measured as a function of individual perceptions, understanding what affects the individual is vital, especially in light of within-neighborhood heterogeneity. In this study, I use insights from social disorganization theory, the systemic model to community attachment, …

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An Algorithm For Symbolic Computing Of Singular Limits Of Dynamical Systems, Dane Jordan Bjork Jul 2018

An Algorithm For Symbolic Computing Of Singular Limits Of Dynamical Systems, Dane Jordan Bjork

Theses and Dissertations

The manifold boundary approximation method, MBAM is a new technique used in approximating systems of equations using parameter reduction. This method and other approximation methods are introduced and described. Several current issues in performing MBAM are discussed in further detail. These issues significantly slow down the process of MBAM and create a barrier of entry for those wishing to use the method without a strong background in mathematics. A solution is proposed to automatically reparameterize models and evaluate specific types of variables approaching limits -- significantly speeding up the process of MBAM. An implementation of the solution is discussed.

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Bacteriophages For Treating American Foulbrood And The Neutralization Of Paenibacillus Larvae Spores, Thomas Scott Brady Jul 2018

Bacteriophages For Treating American Foulbrood And The Neutralization Of Paenibacillus Larvae Spores, Thomas Scott Brady

Theses and Dissertations

The causative agent of the most devastating honeybee disease, American foulbrood (AFB), is the spore-forming bacterium Paenibacillus larvae. To prevent AFB outbreaks beekeepers prophylactically treat their hives with antibiotics even though it decreases the overall health of uninfected hives. A new treatment for AFB is needed due to recent legislation against using antibiotics, antibiotic resistance developing in P. larvae, and the resilience of P. larvae spores. Bacteriophages, or phages, are an attractive alternative to traditional antibiotics because of their specificity and ability to evolve alongside their target bacterium. In this study, two phage cocktails were developed for the …

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Data Assimilation In The Boussinesq Approximation For Mantle Convection, Shane Alexander Mcquarrie Jul 2018

Data Assimilation In The Boussinesq Approximation For Mantle Convection, Shane Alexander Mcquarrie

Theses and Dissertations

Many highly developed physical models poorly approximate actual physical systems due to natural random noise. For example, convection in the earth's mantle—a fundamental process for understanding the geochemical makeup of the earth's crust and the geologic history of the earth—exhibits chaotic behavior, so it is difficult to model accurately. In addition, it is impossible to directly measure temperature and fluid viscosity in the mantle, and any indirect measurements are not guaranteed to be highly accurate. Over the last 50 years, mathematicians have developed a rigorous framework for reconciling noisy observations with reasonable physical models, a technique called data assimilation. …

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Ecomorph Convergence In Stick Insects (Phasmatodea) With Emphasis On The Lonchodinae Of Papua New Guinea, Yelena Marlese Pacheco Jul 2018

Ecomorph Convergence In Stick Insects (Phasmatodea) With Emphasis On The Lonchodinae Of Papua New Guinea, Yelena Marlese Pacheco

Theses and Dissertations

Phasmatodea exhibit a variety of cryptic ecomorphs associated with various microhabitats. Multiple ecomorphs are present in the stick insect fauna from Papua New Guinea, including the tree lobster, spiny, and long slender forms. While ecomorphs have long been recognized in phasmids, there has yet to be an attempt to objectively define and study the evolution of these ecomorphs. Using principal component analysis, PERMANOVA, ANOVA, and phylogenetic reconstructions, we examined the evolution of ecomorphs in the Lonchodinae stick insects of Papua New Guinea. Phylogenetic reconstructions were performed via maximum likelihood and Bayesian methods and ecomorphs were mapped onto recovered topologies to …

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Genetic Basis For Elevated Rheumatic Heart Disease Susceptibility In Samoa, John Bowen Allen Jul 2018

Genetic Basis For Elevated Rheumatic Heart Disease Susceptibility In Samoa, John Bowen Allen

Theses and Dissertations

Rheumatic heart disease is an inflammatory heart disease that affects millions of people around the world. Especially high rates of the disease can be found in Oceania, including the island nation of Samoa. Genetic studies of immune response genes have provided insight into a possible genetic link to increased susceptibility to rheumatic heart disease, including the genes that code for the toll-like receptor (TLR) protein family. One of the functions of TLR proteins is to recognize the presence of bacteria via identification of bacterial flagella. My evaluation of a Samoan family identified a variant in the TLR-5 gene that would …

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Tv Dads: A Grounded Theory Analysis Of Viewer Perceptions Of Fathers In Television Dramas, Katherine Ann Barboza Jul 2018

Tv Dads: A Grounded Theory Analysis Of Viewer Perceptions Of Fathers In Television Dramas, Katherine Ann Barboza

Theses and Dissertations

The present study aims to identify what viewer perceptions individuals have regarding fathers in television dramas. Framed through uses and gratifications theory and executed through the grounded theory method, 12 participants were interviewed. After analysis, findings revealed that although participants say that general perceptions of fathers on TV are negative, they have seen personally the diversity and variety of father portrayals in their favorite television dramas. Additionally, the realism of the TV dramas and characters influence the relatability to both the father figures and other characters in the show. This relatability, in turn, influences the likeability and loyalty to the …

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A Content Analysis Of Relationships And Intimacy In Teen Dramas On Television, Sara Valoise Lamb Jul 2018

A Content Analysis Of Relationships And Intimacy In Teen Dramas On Television, Sara Valoise Lamb

Theses and Dissertations

Television programs continue to play a significant role in a teenager's life as they become involved in dating relationships. Adolescence is a pivotal period of life. Teenagers' usage of media, especially television, provides a source of norms and scripts of what a relationship looks like. The portrayals of sexual content in teen programs has become a source of sexual information instead of parents and peers. Many parents are unaware of the sexual content teen programs deliver to their audiences. This study analyzes how teen dramas create expectations through their portrayal of relationships and intimacy on television. Five teen television programs …

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The Relationship Between Experiential Avoidance And Physiological Reactivity, Brodrick Thomas Brown Jul 2018

The Relationship Between Experiential Avoidance And Physiological Reactivity, Brodrick Thomas Brown

Theses and Dissertations

Due to the universal nature of stress, and its impact on physical health, it is important to understand how it is related to other psychological variables. The current study was undertaken in order to investigate whether an individual's cardiovascular reactivity to stress is impacted by their level of experiential avoidance, as measured by the Acceptance and Action Questionnaire (AAQ-II). Individuals who are experientially avoidant are more likely to attempt to escape or prevent certain experiences and make effort to change them or avoid the contexts in which they occur. Previous research has indicated that experiential avoidance is related to some …

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The Ability Of Novel Phage To Infect Virulent Bacillus Anthracis Isolates, Hyrum Smith Shumway Jul 2018

The Ability Of Novel Phage To Infect Virulent Bacillus Anthracis Isolates, Hyrum Smith Shumway

Theses and Dissertations

Bacillus anthracis is a soil dwelling microbe with pronounced pathogenic potential. Historically, anthrax has infected livestock and man. In the modern-age, anthrax is a bioterrorism concern with major incidents every decade. While the threat of large scale attacks is currently viewed as unlikely, the threat is consistent and constant. Current methods to defend against such an attack focus on antibiotics and containment of public panic. Antibiotic resistance, while not currently an issue for anthrax, could easily become so with genetically engineered weaponized strains created by rogue states or independent actors. This project evolved from collaborations between the Grose lab and …

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Strontium Isotopes-A Tracer For Dust And Flow Processes In An Alpine Catchment, Colin Andrus Hale Jul 2018

Strontium Isotopes-A Tracer For Dust And Flow Processes In An Alpine Catchment, Colin Andrus Hale

Theses and Dissertations

Stream chemistry changes in response to snowmelt, but does not typically reflect thechemistry of the snowpack. This suggests that flow processes between snowmelt and streamsystem, such as interactions with the soil and bedrock, have an important control on waterchemistry and highlight the complex flow pathways from the snowpack to stream. To investigateflow processes in the upper Provo River watershed, northern Utah, we sampled three sites on theriver ~20 times per year during 2016 and 2017. The sites, from highest elevations to lowest wereSoapstone, Woodland, and Hailstone, corresponding to locations of active stream gauges. Toidentify possible water sources to the stream …

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The Clinical Significance Of Hprt As A Diagnostic And Therapeutic Biomarker For Hematological And Solid Malignancies, Michelle Hannah Townsend Jul 2018

The Clinical Significance Of Hprt As A Diagnostic And Therapeutic Biomarker For Hematological And Solid Malignancies, Michelle Hannah Townsend

Theses and Dissertations

An estimated 1,735,350 new cancer diagnosis and 609,640 cancer related deaths are predicted to occur in the United States in 2018. To improve patient prognosis, biomarkers are needed to identify cancer in early stages. When diagnosed at an early stage, cancer is more likely to respond to treatments and patients have a higher survival rate. Consequently, there is an ever-present need to identify biomarkers that can aid in the detection of cancer. Additionally, there is a paradigm shift in the field of cancer treatment towards immunotherapy. Traditional cancer treatments include chemotherapy, radiation, and hormone therapy and are not cancer-specific, which …

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Gekko Optimization Suite, Logan Beal, Daniel Hill, Ronald Abraham Martin, John Hedengren Jul 2018

Gekko Optimization Suite, Logan Beal, Daniel Hill, Ronald Abraham Martin, John Hedengren

Faculty Publications

This paper introduces GEKKO as an optimization suite for Python. GEKKO specializes in dynamic optimization problems for mixed-integer, nonlinear, and differential algebraic equations (DAE) problems. By blending the approaches of typical algebraic modeling languages (AML) and optimal control packages, GEKKO greatly facilitates the development and application of tools such as nonlinear model predicative control (NMPC), real-time optimization (RTO), moving horizon estimation (MHE), and dynamic simulation. GEKKO is an object-oriented Python library that offers model construction, analysis tools, and visualization of simulation and optimization. In a single package, GEKKO provides model reduction, an object-oriented library for data reconciliation/model predictive control, and …

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Automated Urban Parcel Ledger Generation To Track Spatiotemporal Parcel Dynamics, Naci Dilekli, Jennifer Koch Jun 2018

Automated Urban Parcel Ledger Generation To Track Spatiotemporal Parcel Dynamics, Naci Dilekli, Jennifer Koch

International Congress on Environmental Modelling and Software

Urban population growth is expected to continue into the 21st century, bringing about drastic changes to urban landscapes across the globe. Our particular focus is to understand and evaluate urban growth patterns through parcel splitting in the Oklahoma City Metropolitan Area (OKCMA). To this end, we present the background and methodology used to develop the absent land parcel history information in the OKCMA using parcel data from the previous two years. OKCMA multiyear parcel data does not align spatially due to shifts and distortions. We developed a method to identify parent:child parcel relationships using their attribute and geometry information. This …

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Culture Influences On Human Decision-Making Processes Toward Environmental Policy: An Integrative Model Of Human-Environment Interaction, Gabriel Granco, Jessica Heier Stamm, Jason Bergtold, Melinda Daniels, Matthew Sanderson, Aleksey Sheshukov, Martha Mather, David Haukos, Marcellus Caldas Jun 2018

Culture Influences On Human Decision-Making Processes Toward Environmental Policy: An Integrative Model Of Human-Environment Interaction, Gabriel Granco, Jessica Heier Stamm, Jason Bergtold, Melinda Daniels, Matthew Sanderson, Aleksey Sheshukov, Martha Mather, David Haukos, Marcellus Caldas

International Congress on Environmental Modelling and Software

The Anthropogenic era marks the role of humans as agents of planetary modification. In this era, the search for sustainability in human-environment interactions has pushed the development of modeling techniques able to incorporate dynamic natural and human feedbacks across temporal and spatial scales. While researchers have refined models for both natural and human systems separately, the coupling of these systems via model integration continues to be a challenge. In response, researchers have concentrated their attention on how human decision-making processes respond to and affect the environment. New pathways to sustainability may be developed by examining how human culture informs the …

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