Digital Commons Network^™

2023 Fall Newsletter, Plaster Creek Stewards

Newsletters

Highlights:

Our Year at a Glance

Marketing as Education

Plaster Creek Mystery

Insect Biodiversity Study

Green Team and Wellbeing

Coming in 2024

Pestfacts Wa Issue 19 - October 2023, Alan Lord, Cindy L. Webster, Daniel Huberli, Kylie Chambers

PestFacts WA

PestFacts WA Issue 19 - October 2023 contents:

• Native budworm monitoring and management in maturing crops
• Barley leaf rust
• Fusarium crown rot

Soil Succession: Short And Long-Term Impacts Of Grazing On Soil Properties In A Tropical Montane Cloud Forest, June Curtis

Independent Study Project (ISP) Collection

Cattle ranching is the leading cause of deforestation in South America, causing long-lasting alterations to the continent's landscape and ecology. Tropical montane cloud forests (TMCFs) are a rare ecosystem particularly vulnerable to the effects of land conversion to pasture, a process which has implications ranging from biodiversity loss to soil degradation. Grazing is known to significantly alter soils' physical structure through processes of compaction and erosion as well as significant additions of organic matter. Silvopasture, or the integration of pasture and forest, has emerged as an alternative to traditional grazing practices with the hope of mitigating environmental and soil degradation. …

Community Complexity Of A Pollination Network: Analysis Of Plant-Pollinator Interactions In The Eastern Ecuadorian Cloud Forest, Anisa López-Ruiz

Independent Study Project (ISP) Collection

Global declines in pollinators and temporal/spatial mismatches between plants and pollinators threaten the integrity of plant-pollinator networks. Ecological network analysis provides a powerful framework for understanding the dynamics of plant-pollinator networks and measures of community complexity that can help inform areas of priority in conservation. This study observed a plant-pollinator network in a secondary forest close to the Río Zuñac Reserve in the eastern Ecuadorian cloud forest to identify assemblages of plants and pollinators and evaluate measures of community complexity, including specialization and nestedness. Flowering plants were identified and observed along a 1.2 km transect, and floral visitors to these …

Friends In High Places: Establishing Pollination Networks For The Páramos Of Central Ecuador, Emma Diaz

Independent Study Project (ISP) Collection

Well-known for being a global biodiversity hotspot, the Andean Páramos hosts a unique array of floristic diversity seen nowhere else in the world (Luteyn, n.d.). With the resiliency of this ecosystem dependent on the successful reproduction of these plants, it is crucial to understand the pollination network which sustains them. Modern-day research has outlined networks in the Chilean, Venezuelan, and Argentinean Páramos, but one has yet to be defined for Ecuador, despite being the suspected home to nearly half of floristic diversity in the Páramos (Arroyo et al., 1985; Pelayo et al., 2021; Medan et al., 2023; Caranqui et al., …

Variation Of Carbon Stock Of Boca Del Drago Mangrove Forests Based On Salinity And Seaward Proximity, Fiona Wyrtzen

Independent Study Project (ISP) Collection

Mangrove forests, at the intersection of land and sea, are considered one of the most important marine environments for their variety of ecosystem services and their ability to sequester large amounts of carbon in their biomass and adjacent soils. With a changing climate, many of the abiotic and biotic factors influencing mangroves will begin to shift, potentially impacting resilience, growth capacity, and distribution of mangroves worldwide. This study aimed to examine the influence of changing salinity on the carbon stock capacity for Rhizophora mangle and Laguncularia racemosa forests, and the distribution of biomass in each species relative to salinity in …

Assessing The Performance Of Agricultural Systems In The Inland And Coastal Regions Of Northern Portugal Using Indicators: Establishing The Foundation Towards Better Agricultural Practices, Genevieve Gehlken

Independent Study Project (ISP) Collection

This study conducts a comprehensive evaluation of agricultural systems in the distinct coastal and inland regions of Northern Portugal. Employing key indicators, including soil erosion, nitrogen surplus, irrigation practices, Agricultural Gross Domestic Product (GDP), and crop yield, the analysis reveals statistically significant disparities and unique challenges in each region. The coastal areas, marked by higher agricultural GDP, exhibit distinct economic dependencies on agriculture, while the inland regions face challenges related to water scarcity, soil erosion, and rural isolation. The looming threat of climate change adds complexity to these dynamics, further highlighting the need for region-specific, sustainable agricultural practices. In the …

Fauna As Fieldworkers: An Analysis On The Use Of Animals As A Form Of Organic Weed And Pest Management In Modern Viticulture, Mariana Del Carmen Campano

Independent Study Project (ISP) Collection

Recent data on the current state of pesticide use in global agriculture suggests serious concerns over significant overuse and negative effects on both environmental and human health, and current trends only suggest continued increases in future global pesticide use. Without prompt, large-scale intervention, this global abuse of chemical pesticides spells significant threats of not only continued harm to global health and environmental quality, but also to the long term viability of agricultural lands and the growing threat of pesticide resistant insects and weeds. Various methods have been explored in the realm of integrated pest management (IPM), but a current lack …

Optimizing Crop Productivity And Fertility Practices In Intermediate Wheatgrass, Roberta Bianchin Rebesquini

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The intensive management associated with many annual crops often includes recurring tillage, fertilization, and pesticide applications, which contribute to environmental concerns such as water pollution and soil erosion. Intermediate wheatgrass (Thinopyrum intermedium), recognized under the trade name Kernza®, is a perennial grass that can be managed to produce grain and biomass while providing desired environmental benefits such as soil conservation and nutrient cycling. There has been limited research on best management practices and crop productivity for this alternative dual-use crop in Nebraska. A field experiment was conducted beginning in 2021 to assess nitrogen (N), phosphorus (P), and potassium …

Genomic Variations Explorer (Genvarx): A Toolset For Annotating Promoter And Cnv Regions Using Genotypic And Phenotypic Differences, Yen On Chan, Jana Biová, Anser Mahmood, Nicholas Dietz, Kristin Bilyeu, Mária Škrabišová, Trupti Joshi

Biomedical Sciences

The rapid growth of sequencing technology and its increasing popularity in biology-related research over the years has made whole genome re-sequencing (WGRS) data become widely available. A large amount of WGRS data can unlock the knowledge gap between genomics and phenomics through gaining an understanding of the genomic variations that can lead to phenotype changes. These genomic variations are usually comprised of allele and structural changes in DNA, and these changes can affect the regulatory mechanisms causing changes in gene expression and altering the phenotypes of organisms.Inthisresearchwork,wecreatedtheGenVarXtoolset,thatisbacked by transcription factor binding sequence data in promoter regions, the copy number variations …

Belowground Growth Strategies Of Native And Invasive Rhizomatous Perennial Grasses In Response To Precipitation Variability, Clipping, And Competition, Surendra Bam, Jacqueline P. Ott, Jack Butler, Lan Xu

Natural Resource Management Faculty Publications

Invasive clonal species may exhibit different growth strategies than their native clonal competitors. In this study, we examined the spatial distribution of tiller outgrowth and the bud bank by comparing the investment in phalanx versus guerilla growth of a native and invasive perennial grass in North America. We also examined the efect of altered precipitation frequency, clipping, and competition on their clonal growth strategies. Investment in phalanx and guerilla growth was assessed by examining live propagule and tiller production from the plant crown versus its rhizomes. Although invasive Bromus inermis and native Pascopyrum smithii exhibited similar clonal growth strategies as …

Bryophyte (Sl) Growth And Environmental Factors Along An Altitudinal Gradient On Cerro Gaital, El Valle, Coclé, Panamá, Julian Grace-Martin

Independent Study Project (ISP) Collection

Research on bryophytes (SL) in the tropics has been lacking compared with the high number of species found there and the potential benefit of bryophytes (SL) as indicators of pollutants and other forms of human disturbance. This study investigated whether or not bryophyte (SL) growth patterns showed relation when compared with environmental factors on the mountain Cerro Gaital in El Valley, Panamá. Whether or not bryophytes (SL) are present, extent of the area covered by their growth, and height of their growth are all aspects of bryophyte (SL) growth that were used. In this study, these three aspects are compared …

Genetic Architecture Of Soybean Tolerance To Off-Target Dicamba, Caio Canella Vieira, Jing Zhou, Diego Jarquin, Jiangfeng Zhou, Brian Diers, Dean E. Riechers, Henry T. Nguyen, Grover Shannon

Crop, Soil and Environmental Sciences Faculty Publications and Presentations

The adoption of dicamba-tolerant (DT) soybean in the United States resulted in extensive off-target dicamba damage to non-DT vegetation across soybean-producing states. Although soybeans are highly sensitive to dicamba, the intensity of observed symptoms and yield losses are affected by the genetic background of genotypes. Thus, the objective of this study was to detect novel marker-trait associations and expand on previously identified genomic regions related to soybean response to off-target dicamba. A total of 551 non-DT advanced breeding lines derived from 232 unique bi-parental populations were phenotyped for off-target dicamba across nine environments for three years. Breeding lines were genotyped …

Qtls And Candidate Loci Associated With Drought Tolerance Traits Of Kaybonnet X Zhe733 Recombinant Inbred Lines Rice Population, Yheni Dwiningsih, Julie Thomas, Anuj Kumar, Chirag Gupta, Navdeep Gill, Charles Ruiz, Jawaher Alkahtani, Niranjan Baisakh, Andy Pereira

Crop, Soil and Environmental Sciences Faculty Publications and Presentations

Rice is the most important staple crop for the sustenance of the world’s population, and drought is a major factor limiting rice production. Quantitative trait locus (QTL) analysis of drought-resistance-related traits was conducted on a recombinant inbred line (RIL) population derived from the self-fed progeny of a cross between the drought-resistant tropical japonica U.S. adapted cultivar Kaybonnet and the drought-sensitive indica cultivar ZHE733. K/Z RIL population of 198 lines was screened in the field at Fayetteville (AR) for three consecutive years under controlled drought stress (DS) and well-watered (WW) treatment during the reproductive stage. The effects of DS were quantified …

Genome-Wide Association Study And Genomic Prediction Of Fusarium Wilt Resistance In Common Bean Core Collection, Kenani Chiwina, Haizheng Xiong, Gehendra Bhattarai, Ryan Dickson, Theresa Makawa Phiri, Yilin Chen, Ibtisam Alatawi, Derek Dean, Neelendra K. Joshi, Yuyan Chen, Awais Riaz, Paul Gepts, Mark Brick, Patrick Byrne, Howard Schwartz, James B. Ogg, Kristen Otto, Amy Fall, Jeremy Gilbert, Ainong Shi

Horticulture Faculty Publications and Presentations

The common bean (Phaseolus vulgaris L.) is a globally cultivated leguminous crop. Fusarium wilt (FW), caused by Fusarium oxysporum f. sp. phaseoli (Fop), is a significant disease leading to substantial yield loss in common beans. Disease-resistant cultivars are recommended to counteract this. The objective of this investigation was to identify single nucleotide polymorphism (SNP) markers associated with FW resistance and to pinpoint potential resistant common bean accessions within a core collection, utilizing a panel of 157 accessions through the Genome-wide association study (GWAS) approach with TASSEL 5 and GAPIT 3. Phenotypes for Fop race 1 and race …

Growing South Dakota (Fall 2023), College Of Agriculture, Food And Environmental Sciences

Growing South Dakota (Publication of the College of Agriculture, Food and Environmental Sciences)

[Page] 3 Back-to-Back Champions: SDSU Quarter Scale Tractor Team Repeats International Win
[Page] 6 CAFES Welcomes New Members to College Leadership Team
[Page] 9 Vikram Mistry Retires After Nearly 40-Year Career at SDSU
[Page] 12 Bill Gibbons Retires After 36 Years at SDSU
[Page] 13 Nic Uilk: Klingbeil Endowed Educator in Precision Agriculture
[Page] 15 SDSU Students Study Abroad
[Page] 19 CAFES Faculty Claim National Awards
[Page] 21 Dairy Alum Sanne de Bruijn Grabs Global Opportunities
[Page] 23 SDSU Extension Cohort Programs
[Page] 25 Summer Field Day Highlights
[Page] 29 Jackrabbits Now and Then

Evaluation Of The Inhibitive Properties Of Silver Nanoparticles In Senna Occidentalis Root Extract As Corrosion Inhibitor Of Mild Steel, Victor O. Egbeneje, Samuel E. Okhale, Chinyere Imoisi, Isaac O. Ogbogo, Omolade Ojo

Tanzania Journal of Science

The use of nanoparticles as corrosion inhibitors has gained popularity because of its increased corrosion efficiency due to increase surface to volume ratio. Nanoparticles which undergo physisorption/chemisorption to the corrosion metal surface and inhibit the corrosion efficiently also have low toxicity, low cost and easy production. In this research work, weight lost method was applied to study the inhibitive properties of silver nanoparticles (AgNPs) synthesized using Senna occidentalis root extract as environmentally benign corrosion inhibitor of mild steel in 0.5 M H2SO4 medium at 298 K and 308 K. It was observed that the corrosion rate of the steel sample …

Did Cover Crop Or Animal Manure Ameliorate Corn Residue Removal Effects On Soil Mechanical Properties After 10 Years?, Hans W. Klopp, Humberto Blanco-Canqui, Michael Sindelar, Virginia L. Jin, Marty R. Schmer, Richard B. Ferguson

Department of Agronomy and Horticulture: Faculty Publications

Crop residue removal may negatively affect soil mechanical properties, which are key components of soil quality. To evaluate potential long-term effects, we assessed the 10-yr impact of corn (Zea mays L.) residue removal (59 % of non-grain biomass annually) on surface soil mechanical properties (0–20 cm). We also evaluated whether adding carbon (C) amendments, such as using a winter rye (Secale cereale L.) cover crop or surface-applying cattle manure (24 Mg ha− 1 biannually) can ameliorate the effects of crop residue removal. This long-term study was under irrigated no-till continuous corn on a silt loam soil in south-central …

Design Of A Cooling System Integrated With Ultraviolet Light For Preservation Of Fruits And Vegetables At Variable Tropical Weather Conditions: A Case Study Of Arusha, Tanzania, John Pyuza Gunda, Alexander Pogrebnoi, Baraka Kichonge

Tanzania Journal of Science

Post-harvest losses of fruits and vegetables pose significant challenges, especially in tropical climates. This study introduces the development and performance evaluation of a solar-powered evaporative cooling storage system integrated with ultraviolet light (UV) designed for preservation of perishable fruits and vegetables. The cooling chamber supplied with ultraviolet lamp was developed using locally available materials such as sisal, sponge, and bricks. The performance of the system was evaluated in terms of air temperature decrease, relative humidity increase, and evaporative cooling power capacity both for sunny and cloudy tropical weather conditions. The study reveals that activating the UV light considerably extends the …

Microplastics In Marine Sediments From Dar Es Salaam Coast: Spatial Distribution And Characterization, Macarius P. Mtega, Matobola J. Mihale, Kessy F. Kilulya

Tanzania Journal of Science

The purpose of the research was to determine the spatial distribution and characterization of microplastics in marine sediments of beaches along the Indian Ocean of Dar es Salaam coast. The sediment samples were extracted in triplicate using floatation method followed by digestion of organic debris, then analyzed using At-FTIR spectrophotometer and stereomicroscope. The mean concentrations of microplastics for Kijichi Beach were 700 ± 907 particles/m2 at 1 cm, 859 ± 839 particles/m2 at 5 cm and 590 ± 782 particles/m2 at 10 cm; from Palm Beach were 157 ± 15 particles/m2 at 1 cm, 130 ± 182 particles/m2 at 5 …

Effects Of Bacillus Thuringiensis, Beauveria Bassiana, Neem, And A Tomato Inter-Crop On Diamondback Moth (Plutella Xylostella L.) (Lepidoptera: Plutellidae) In Tharaka-Nithi County, Kenya, Ceciliah N. Ngugi, Jesca N. Mbaka Mbaka, Hellen W. Muthengi

Tanzania Journal of Science

Cabbage (Brassica oleracea var. capitata) is an important crop in Kenya, ranked 3rd among the exotic vegetables. Diamondback moth (DBM) is a major cabbage pest that can cause a 100% loss in yield if not well managed. Farmers indiscriminately use synthetic pesticides associated with environmental, health, and pest resistance concerns to manage the DBM. To increase the availability of technologies for effective management of DBM in Kenya, three biopesticides; BioPower (Beauveria bassiana 1.0 x 108 CFUs/g), Dipel DF® (Bacillus thuringiensis subsp. kurstaki), Neemraj Super 3000 (Azadirachtin 0.3% EC), and a tomato inter-crop were evaluated. Cabbages (30 plants) spaced at 40 …

Ethnobotanical Survey On The Knowledge And Use Of Medicinal Plants For Malaria Management Among University Students, Felista W. Mwingira, Deokary J. Matiya, Neema G. Mogha

Tanzania Journal of Science

Malaria remains a public health problem in Tanzania, escalated by the emergence of both parasite and vector resistance. Plant-based traditional medicines have been widely utilized as alternatives to malaria management. However, proper documentation is minimal, especially among the younger generation. This study assessed the knowledge of medicinal plants for malaria management among 532 Dar es Salaam University College of Education students. Overall, twenty-four plant species, most belonging to the family Asteraceae, were identified with Azaradichta indica being the most dominant species. These results reveal a substantial knowledge of medicinal plants for malaria management among university students.

Effective Enhancement Of Post-Harvest Tomato Storage Through Wrapping Using Deacetylated Chitin Nanofibril-Plasticized Honey Films, Ngesa Ezekiel Mushi, Edina Meela, Divina Kaombe

Tanzania Journal of Science

As one of the most grown seasonal fruit, tomato is widely consumed for making food products, drugs and ornaments. However, poor post-harvest handling system, transport and storage facilities deteriorate the quality of tomato fruits resulting into post-harvest losses. These problems have been addressed by the use of nanotechnology in this study. The combination of a chitosan surface and the core shell chitin results into novel deacetylated chitin nanofibril (DeChNF) with good biological activity and mechanical strength. The effectiveness of the DeChNF films for food preservation as an alternative material to chitosan is investigated. The DeChNF with degree of acetylation (DA) …

Genomic And Transcriptomic Analyses Reveal Polygenic Architecture For Ecologically Important Traits In Aspen (Populus Tremuloides Michx.), Jennifer F. L. Riehl, Christopher T. Cole, Clay J. Marrow, Hilary L. Barker, Carolina Bernhardsson, Kennedy Rubert-Nason, Pär K. Ingvarsson, Richard L. Lindroth

Aspen Bibliography

Intraspecific genetic variations in foundation species such as aspen (Populus tremuloides Michx.) shapes their impact on forest structure and function. Identifying genes underlying ecologically important traits is key to understanding that impact. Previous studies, using single-locus genome-wide association (GWA) analyses to identify candidate genes, have identified fewer genes than anticipated for highly heritable quantitative traits. Mounting evidence suggests that polygenic control of quantitative traits is largely responsible for this "missing heritability" phenomenon. Our research characterized the genetic architecture of 30 ecologically important traits using a common garden of aspect through genomic and transcriptomic analyses. A multilocus association model revealed …

Floral Constancies Of Flies And Native Bees Visiting Ceanothus Perplexans (Rhamnaceae) Flowers In Western Arizona, William D. Wiesenborn

Western North American Naturalist

Ceanothus perplexans (Rhamnaceae) is a chaparral and montane shrub found mostly in southern California and northern Baja California, Mexico, and infrequently in western Arizona. The plant produces inflorescences of small, perfect, white or cream flowers during winter to early spring. I examined the pollination of C. perplexans in the Cerbat Mountains in western Arizona during March and April 2022 by collecting flies and native bees on flowers and estimating floral constancies from the proportions of conspecific pollen in pollen loads. Flowers are protandrous with the pistil elongating and the stigmas separating after the anthers lose pollen. Pollen from C. perplexans …

Dynamic Reconfiguration Of Switchgrass Proteomes In Response To Rust (Puccinia Novopanici) Infection, Nathan A. Palmer, Sophie Alvarez, Michael J. Naldrett, Anthony Muhle, Gautam Sarath, Serge J. Edmé, Satyanarayana Tatineni, Robert B. Mitchell, Gary Yuen

Department of Plant Pathology: Faculty Publications

Switchgrass (Panicum virgatum L.) can be infected by the rust pathogen (Puccinia novopanici) and results in lowering biomass yields and quality. Label-free quantitative proteomics was conducted on leaf extracts harvested from non-infected and infected plants from a susceptible cultivar (Summer) at 7, 11, and 18 days after inoculation (DAI) to follow the progression of disease and evaluate any plant compensatory mechanisms to infection. Some pustules were evident at 7 DAI, and their numbers increased with time. However, fungal DNA loads did not appreciably change over the course of this experiment in the infected plants. In total, 3830 …

Cercocarpus Ledifolius Var. Intricatus ‘Doubledown’, Asmita Paudel, Youping Sun, Larry A. Rupp

Plants, Soils, and Climate Faculty Publications

Bonsai (tray landscape, potted scenery, potted landscape, miniature trees, and rockery) is an artistic horticulture practice of developing aesthetically formed trees and landscapes in miniature with appropriately aesthetic containers. This has been practiced over a few thousand years in oriental cultures, including the ancient Chinese tradition of penzai or penjing, from which the art originated; the miniature living landscapes of Vietnamese hòn non bộ; and the Japanese variations of bonsai and “tray planting” (Gustafson 1995). To produce bonsai plants that share similar shapes and styles of mature, full-size trees, cultivation techniques are used, including leaf trimming, …

Two New Species Of Tulostoma (Agaricales, Basidiomycota) From The Neotropics, Alexandro Lima, Gislaine Melanda, Paulo Marinho, T A, María Paz Martín, Iuri Baseia

Turkish Journal of Botany

Tulostoma catimbauense and T. deltaconcavum, both collected from Neotropical region, in the Vale do Catimbau National Park, Brazil, are proposed as new to science. Detailed macro- and micromorphological descriptions, including scanning electron microscopy of the basidiospores, are provided. ITS nrDNA sequence analyses were used to investigate the phylogenetic position of these taxa in the genus Tulostoma. Discussions about related species were carried out.

Determination Of The Genetic Diversity, Population Structure, And Some Ecological Preferences Of The Endemic Muscari Adilii, Ali̇ Murat Keser, Ahmet Emre Yaprak, Gül Ni̇lhan Tuğ

Turkish Journal of Botany

The population structure and genetic diversity of M. adilii and some edaphic and climatic preferences of the species were investigated. Although the chemical characteristics such as pH, EC, and gypsum were similar for the three subpopulations, the physical qualities and lime content of the soil were different from each other. In terms of bioclimate, the Nallıhan station (Nallıhan Bird Sanctuary) has a lower annual average temperature and precipitation value, and monthly average values during the germination and flowering periods, than the Beypazarı station (Hırkatepe and Çoban Ahmet Fountain). Amplification with 16 ISSR markers produced 377 bands from 84 individuals belonging …

Pollen Morphology Of Some Tanacetum L. (Asteraceae) Taxa And Its Systematic Value, Murat Kurşat, İsmai̇l Çelti̇k, Bi̇rol Başer, Fahretti̇n Özbey, İrfan Emre

Turkish Journal of Botany

Pollen grains of 24 Tanacetum taxa from Türkiye were examined by light (LM) and scanning electron microscopy (SEM). Detailed pollen morphological characteristics are provided for these taxa. According to the 24 analyzed taxa, T. parthenifolium has the smallest pollen grains, and T. aurem var. aurem possesses the largest ones. The basic shape of the pollen grains in most taxa is oblatespheroidal. However, suboblate pollen grains are recorded for T. balsamitoides, T. aurem var. aurem, and T. tomentellum. The polar axis ranges from 16.56 to 26.14 µm, and the equatorial diameter ranges from 17.64 to 30.12 µm in this study. …