Digital Commons Network^™

The Genetics Of Sex, Fortis Brown

The Agora

Sex is a complex biological process that begins in the womb and lasts into puberty and beyond. It is often presented to society as a binary, chromosome-based system where XX means female and XY means male. In reality, chromosomes are just the beginning of a lifelong process involving hormones that influence biological changes. This process becomes apparent with its errors, known as Differences in Sexual Development (DSDs). DSDs can be caused in two main ways: through changes in either meiosis or in gene expression. While many consider these changes as ‘errors’, the processes that cause them to have been intentionally …

Nutrition Strategies To Help Children With Arfid Overcome Nutrition-Related Deficiencies, Saul Campos

The Agora

Avoidant/Restrictive Food Intake Disorder (ARFID) is a serious and relatively newly recognized eating disorder that affects children and adolescents. The disorder was formally introduced in the Diagnostic and Statistical Manual of Mental Disorders, Fifth Edition (DSM-5) and is characterized by restrictive eating patterns that lead to significant nutritional deficiencies, weight loss or poor growth, dependence on nutritional supplements, or interference with psychosocial functioning (American Psychiatric Association, 2013). Current estimates suggest that ARFID may affect approximately 1–5% of children and adolescents, though prevalence varies depending on the population studied and diagnostic criteria used (Białek-Dratwa et al., 2022). Unlike other eating disorders, …

Exploration Of A Relationship Between The Activities Of Trail And 4’-Trifluoromethoxychalcone., Abigail C. Ernst

Undergraduate Theses

Cancer is the overgrowth of dysregulated or mutated cells that affects 1 in 3 Americans. Chalcones are natural products with many possible derivatives, such as 4’-trifluromethoxychalcone (4TF), developed in Dr. Krzysiak’s lab, which exhibit anticancer activity against cancer cell lines. Tumor Necrosis Factor-Related Apoptosis-Inducing Ligand (TRAIL) is a tumor surveillance cytokine that acts on two receptor types: death receptors and decoy receptors. One way cancer cells can become resistant to TRAIL is by upregulating decoy receptors and/or downregulating death receptors. In this study, MTS assays evaluated the potential relationship between TRAIL and 4TF that sensitizes A549 cells to TRAIL. The …

Identification Of Sex Chromosomes In The Genus Lepidodactylus, Zuleihat Yusuf Idris

Master's Theses (2009 -)

ABSTRACT IDENTIFICATION OF SEX CHROMOSOMES IN THE GENUS LEPIDODACTYLUS Zuleihat Y. Idris, M.S Marquette University, 2026 Sex determination in vertebrates is remarkably diverse and is characterized by frequent evolutionary transitions between genetic sex determination (GSD) and environmental sex determination (ESD). Within reptiles, geckos (Gekkota) exhibit the most diverse sex determination mechanism in vertebrates. Although geckos are the target of more recent research, most lineages still lack identifiable sex-determining mechanisms. This gap in knowledge has limited the understanding of the diversity and evolution of sex determination in vertebrates. In this study, an automated pipeline (FnPiPER) and whole-genome resequencing from male and …

Mental Gymnastics: How Misconceptions Drive Unstable Forms Of Scientific And Religious Reconciliation, Jamie Jensen, Jade Sorensen, Andrea Phillips, Mackay Strong, Isaac A. Woolley, Spencer M. Johanseon, Afton Fillmore, Luke N. Noakes

ScholarsArchive Data

Interview transcripts of introductory biology students attempting to reconcile evolutionary science with religious faith.

Tracing Microplastics From Polymer-Coated Urea: Urban To Agricultural Pathways And Environmental Fate, Caden Joseph Seely

Theses and Dissertations

Polymer-coated urea (PCU) is widely used as a slow-release nitrogen (N) fertilizer because it improves N use efficiency and reduces losses through leaching, denitrification, and volatilization. However, the polymer coating raises concerns about potential microplastic (MP) transport to surface waters following fertilizer application. This thesis evaluates the off-site transport of MPs and associated nutrient and sediment losses from PCU in both urban landscape and agricultural systems. In the urban landscape study, treatments included sod, mulched beds, and water-efficient ground cover receiving uncoated urea, PCU, or liquid slow-release N at 225 kg N ha⁻¹ (with reduced rates for beds and ground …

Temporal Interference Stimulation Effectively Reduces Parkinsonian Beta Band Activity In A Computational Model Of The Basal Ganglia Network, Anna Stolle

25th Annual A. Paul and Carol C. Schaap Celebration of Undergraduate Research and Creative Activity (2026)

Parkinson’s disease (PD) is a progressive neurological disorder characterized by degeneration of dopaminergic neurons, leading to impaired motor function and disrupted basal ganglia activity. One of the most effective treatments is deep brain stimulation (DBS), which targets deep brain regions to restore abnormal firing patterns. However, DBS requires invasive surgery to implant electrodes, posing surgical risks and limiting accessibility. This has driven interest in non-invasive alternatives that achieve similar therapeutic outcomes. Transcranial temporal interference stimulation (tTIS) is a non-invasive technique delivering two high-frequency currents through scalp electrodes. These currents overlap to produce a low-frequency "beat" capable of reaching deep structures …

Potential Applications Of Thymus Vulgaris In Dental Care: A Review Of Antimicrobial And Oral Health Benefits, Lakenzia Z. Ham

Undergraduate Research Conference

This research proposal focuses on how common thyme (Thymus vulgaris) can be used in dental care. There has been more interest in natural products for dental health because some common dental treatments can have side effects or lead to antibiotic resistance. Thyme contains natural compounds like thymol and carvacrol that help kill bacteria, reduce inflammation, and prevent buildup on teeth.

The purpose of this study is to investigate the current scientific literature to see the effectiveness of thyme in preventing common oral health problems like cavities, gum disease, and bad breath. Research shows that thyme can fight bacteria …

From Garden To Laboratory: The Scientific Significance Of Zinnia Elegans, Katelyn G. Klark

Undergraduate Research Conference

Zinnia elegans is a flowering species in the Asteraceae family that originated in Mexico and eventually spread to Europe (Burlec et al., 2019). This species' vast array of colors, drought resistance, and other agricultural benefits make this plant highly sought after in gardens worldwide (Burlec et al., 2019). However, following the methodology of a preliminary research literature review, recent scientific research suggests that Z. elegans may possess significance beyond its aesthetic appeal. This literature review aimed to examine recent scientific findings regarding zinnias and their potential agricultural, medicinal, and genetic applications. To explore these possibilities, recent scientific studies were examined …

An Integrative Description Of Euscorpius Diagorasi Sp. N. From Rhodes, Greece (Scorpiones: Euscorpiidae), Konstantinos Kalaentzis, Francesco Frigioni, Eliza Kaitetzidou, Alessio Iannucci, Alexandros Triantafyllidis

Euscorpius

The genus Euscorpius Thorell, 1876 comprises a diverse and taxonomically challenging group of scorpions in the Mediterranean, with Greece representing one of its principal centers of diversity. In this study, we provide an integrative description of Euscorpius diagorasi sp. n., a new species from Rhodes Island, Greece. The new species is described on the basis of adult male and female morphology and mitochondrial COI sequence data. It is a small oligotrichous species characterized by a total length of approximately 21–25 mm, pale yellow to light brown coloration with darker reddish-brown pedipalps, pectinal tooth count of 8 in the male …

Late-Season Forb Availability And Bumble Bee Foraging Patterns In Iowa’S Restored Prairies And Suburban Gardens, Isaac De Young, Ellary Carson, Mya Cole, Tucker Draayer, Sharon Huffman, Naomi Johnson, Jasmine Lux, Genesis Maldonado, Caitlin Olson, Maelee Rodenburg, Jordan Shull, Travis Sweeney, Arianna Van Donkelaar, Laurie Furlong, Todd Tracy

Celebration of Research

Pollinators are essential to terrestrial ecosystems, and bumble bees are among the most effective pollinators in the United States (Hatfield et al., 2012). They pollinate forbs (non-grass herbaceous flowering plants), including crops, garden plants, and native prairie species (Dumroese et al., 2016). Their ability to travel long distances, forage in cool temperatures, and buzz-pollinate makes them critical to both wild and agricultural productivity (Mola & Williams et al., 2019). Research shows that bumble bee populations have declined in recent decades due to habitat loss, reduced floral resources, pesticide exposure, and climate change (IPBES, 2016).

Northwest Iowa is dominated by agriculture, …

Eagleeye Is Landing: Discovery Of Cytotoxic And Defense Genes In A Cluster A16 Mycobacteriophage, Clara Bader, Kylie Foss, Mallory Gramstad, Korver Hupke, Jenna Kluxdal, Elsie Larson, Ayda Maassen, Adriana Sandbulte, Dane Schoenborn, Emma Steinhardt, Alexa Trover, Sara S. Tolsma

Celebration of Research

EagleEye is a temperate bacteriophage, which was isolated on the host, Mycobacterium smegmatis mc2 155 from soil collected in Houston, TX. It is classified as cluster A16. We are using a systematic genetic screen to uncover functions of phage genes for which the function is unknown. We cloned each gene into the pExTra plasmid and assayed phage gene individually for two phenotypes: cytotoxicity, the ability to interfere with host cell growth, and defense, the ability to protect the host cell from infection by other phages. We have cloned all but 15 of EagleEye’s 95 protein-coding genes. Thus far, we have …

If You Give A Mouse A Phage, Peyton Abraham, Princess Bola-Lawal, Amelia Brown, Anne Eveland, Jenna Kluxdal, Elsie Larson, Gabrielle O'Bannon, Leonardo Romo, Sara S. Tolsma

Celebration of Research

Island3 (Cluster I1) and Sbash (Cluster I2) are Mycobacteriophages that have a high degree of genetic similarity—especially in the region of their genomes that include genes for structural proteins. Because their structural proteins appear so similar, we hypothesized that antibodies raised against Island3 would cross-react with Sbash and vice versa. To test our hypothesis, we immunized female BALB/c mice with phage high titer lysates or filtered M. smegmatis (control), collected serum, and used the antibodies in ELISA and Western Blot assays. We observed less cross-reactivity than we expected.

Annotation Of Bacteriophages Redraider89, Superherocarly, Cherrycola, And Kouch, Brianne Brandt, Mya Cole, Matthew Dawkins, Julia De Vos, Isaac De Young, Hannah Gordon, Landon Greve, Brody Hoverstein, Mia Kellenberger, Genesis Maldonado, Charlotte Pritchard, Noah Robinson, Leonardo Romo, Mackenzie Schram, Grace Timm, Arianna Van Donkelaar, Kamea Van Kalsbeek, Byron Noordewier, Sara S. Tolsma

Celebration of Research

Phages are important research tools and can be used as an alternative to antibiotics. They are abundant and diverse. Genome annotation is used to better understand phage diversity as well as individual phages for use in the lab and clinic. We annotated the genomes of four novel phages: RedRaider89, SuperHeroCarly, Kouch, and CherryCola. All four phages were discovered by Northwestern College students. CherryCola is a Cluster DC1 phage that infects Gordonia terrae. It has 92 predicted protein-coding genes. RedRaider89 (Cluster B1) and SuperHeroCarly (Cluster D1) infect Mycobacterium smegmatis mc²155. RedRaider89 has 99 predicted protein-coding genes and SuperHeroCarly has 87 …

Understanding The Role Of Lipid Metabolism On Pancreatic Cancer Metastasis, Luke Fischer, Kylie Foss, Jacob Lewis, Joshua Lewis, Emma Steinhardt, Megan Vangarven, Cody Rozeveld

Celebration of Research

Pancreatic cancer is one of the deadliest types of cancer due to late-stage detection and early metastasis. Other than smoking, one of the few known risk factors for pancreatic cancer is obesity (1). On the cellular level, excess fat can promote cell migration and invasion (2). However, the exact fat utilization pathway remains unknown. We propose that lysosomes may be exploited in pancreatic cancer to break down fat and provide energy for metastasis and invasion.

Bacterial 2-Hybrid Assay: Interactions Of Phage Island3'S Gene 36 And Mycobacterium Smegmatis Gene Products, Elsie L. Larson, Sara Tolsma

Celebration of Research

Island3 is a Cluster I1 bacteriophage that infects Mycobacterium smegmatis. Northwestern College students are performing systematic genetic screens to identify Island3 genes that are cytotoxic or protect host cells from infection by other phages (defense). We identified Island3’s gp36 as a cytotoxic gene. Now we are using a bacterial two-hybrid assay to identify a host protein(s) interaction partner. We hypothesize that host proteins that bind gp36 will reveal the mechanism by which gp36 confers cytotoxicity.

Investigation Of Northwest Iowa Pollinator Communities Using Two Survey Methods, Ellary Carson, Mya Cole, Isaac De Young, Sharon Huffman, Naomi Johnson, Genesis Maldonado, Maelee Rodenburg, Travis Sweeney, Tark Griebel, Laurie Furlong, Todd Tracy

Celebration of Research

The ecological services of insect pollinators are well established and the documented decline in pollinator biodiversity is of great concern. Baseline data and continued monitoring are essential as we ongoing trends in pollinator communities and evaluate efforts supporting their recovery. Using two survey methods, our study provides pollinator community data at two conservation sites in Northwest Iowa. In September of 2025, we used three colors of pan traps (blue, yellow, and white) to investigate pollinator communities at a small, reconstructed prairie (Buena Vista County Park) and a nearby partially restored native prairie (The Nature Conservancy Glacial Hills Preserve). We also …

Geographic Trends In North American Tornado Risk: A 75 Year Analysis, Thomas Tracy, Todd Tracy

Celebration of Research

In recent years, many meteorologists have claimed that ‘tornado alley’ has shifted over the last decades toward the east. We wanted to see if this claim holds true. We searched online for databases containing information on all US and all Canada tornadoes. By visualizing the data, we were able to find some trends in rating and the number of tornadoes over time. Using a program we wrote in R, we calculated the geographical average for tornadoes for each year. We also weighted this average by the rated magnitude of each tornado and by the number of deaths from each tornado. …

Recent Wetland Elevation Dynamics In Coastal Louisiana, Usa, Elizabeth Harris

LSU Master's Theses

Coastal marshes globally are increasingly vulnerable to accelerating relative sea-level rise (RSLR), which threatens their capacity to maintain elevation through feedbacks among sediment supply, vegetation productivity, hydrology, and soil processes. Although many marshes can persist under moderate rates of sea-level rise through vertical accretion and belowground biomass production, this resilience is strongly constrained by sediment availability and subsurface processes such as autocompaction and organic matter decomposition. High accretion is often assumed to confer marsh resilience; however, subsurface processes, particularly autocompaction driven by surface loading, can substantially offset elevation gains. Coastal Louisiana experiences among the highest rates of RSLR worldwide due …

Optimizing Seedling Emergence In Sagebrush-Steppe Restoration: The Role Of Sowing Depth, Seed Coatings, And Microsite Amendments, John Thomas Stromberg

Theses and Dissertations

Seedling survival of fall-sown seeds over the winter and subsequent emergence in spring is a major demographic bottleneck limiting recruitment in dryland restoration. Deeper sowing can place seeds in a more favorable soil environment with more stable moisture and moderated temperatures, but emergence from these depths is often constrained by the greater distance seedlings must grow to reach the surface and by mechanical resistance in the upper soil layer. In the first chapter of this thesis, we evaluated the use of a slow-release gibberellic acid (GA₃) polymer seed coating to aid in seedling emergence from deeper sowing depths. We compared …

Effects Of Gnrh And Hcg Administration On Conception Rate And The Subsequent Estrous Cycle On Day 12 Following Artificial Insemination In Holstein Cows, Mustafa Hi̇lmi̇ Yaranoğlu, Hüseyi̇n Erdem

Turkish Journal of Veterinary & Animal Sciences

The present study investigates the effects of gonadotropin-releasing hormone (GnRH) and human chorionic gonadotropin administration on the conception rate of cows 12 days after artificial insemination (AI). Included in the study were 150 high milkyielding Holstein cows housed under the same husbandry and feeding conditions. All had calved at least once between the ages of 2.5 and 6 years, and were between 90 and 220 days in milk. In accordance with the farm’s reproductive management approach, a controlled internal drug release (CIDR) device was inserted into the vagina concurrent with a GnRH injection (day 0), and the device was removed …

The Effects Of Sodium Perborate Tetrahydrate On Digestibility And Nutrient Transporters In Rats, Büşra Özmen, Emre Şahi̇n, Muhammed Tokmak, Veysi̇ Kayri̇, Ramazan Özmen, Kazi̇m Şahi̇n

Turkish Journal of Veterinary & Animal Sciences

Boron (B) is an essential micronutrient involved in hormone activity, energy metabolism, antioxidant defense, bone development, wound healing, and immune function. The present study explores the effects of sodium perborate tetrahydrate (SPT) on nutrient digestibility and the modulation of specific nutrient transporters in the jejunum and ileum of rats. A total of 40 rats were divided into four equal groups: 1) control, 2) SPT 0.5 (0.5 mg B/kg body weight [BW]), 3) SPT 1 (1 mg B/kg BW), and 4) SPT 2 (2 mg B/kg BW), and were fed the respective diets for a period of 4 weeks. The digestibility …

Morphology And Histology Of The Developing Ovary In Malaysian Village Chicken (Gallus Gallus Domesticus) Chicks, Nur Athirah Lope Abdul Rashid, Mazlina Mazlan, Intan Shameha Abdul Razak, Rozaini Mohd Zohdi, Awang Hazmi Awang Junaidi

Turkish Journal of Veterinary & Animal Sciences

The Malaysian village chicken (MVC; Gallus gallus domesticus) is an indigenous breed derived from the red junglefowl (Gallus gallus), exhibiting slower growth and reproductive rates. The MVC plays an important ecological role in local farming systems and represents a valuable genetic resource. However, detailed information on ovarian development in this breed remains limited. This study provides the first comprehensive morphological and histological characterization of the developing ovary in MVC chicks. A total of 20 chicks aged 1, 2, 4, and 8 weeks (n = 5 per age group) were examined. These MVC chicks possessed a single functional left ovary positioned …

Housing System And Gender Effect On Carcass And Meat Quality Characteristics In Turkish Pekin Ducks, Hasan Önder, Uğur Şen, Mi̇ne Yilmaz, Si̇bel Bozkurt, Eli̇f Ci̇lavdaroğlu, Di̇lek Gökçek, Ahmet Uçar, Kadi̇r Erensoy, Burcu Kurnaz

Turkish Journal of Veterinary & Animal Sciences

Improving meat quality is one of the most important aims for scientists and breeders. This study aimed to evaluate the effects of housing system (indoor vs. free-range) and gender on carcass and meat quality traits in Pekin ducks. The animal material consisted of 20 male and 20 female birds in each housing system. Our results show cold carcass weights of 3174.10 ± 80.65 g and 2672.60 ± 59.63 g for male and female birds in the indoor housing system and 2821.10 ± 50.53 g and 2306.90 ± 43.32 g for male and female birds in the free-range housing system. The …

Age-Related Estimates Of Genetic Parameters For Growth And Ultrasonic M. Longissimus Thoracis Et Lumborum Muscle Traits In Eşme Lambs, İbrahi̇m Cemal, Orhan Karaca, Onur Yilmaz, Nezi̇h Ata

Turkish Journal of Veterinary & Animal Sciences

The growth performance and ultrasonic M. longissimus thoracis et lumborum (LTL) muscle traits of 2397 Eşme lambs raised in the Eşme district of Uşak province, an important lamb production area in Western Anatolia, were evaluated at 3 months (n = 1690) and 5 months (n = 707) of age. The average age of the lambs at the time of the first measurement (at weaning) was 100.15 days, and 152.37 days at the second. At 3 months of age, the average live weight (LW) was 29.34 kg and the average daily gain (ADG) was 248.35 g/day. By month 5, the LW …

Effect Of Different Pellet Binders On Palm Kernel On Growth Performance And Nutrient Digestibility In Broiler Chicken, Nuun Marfuah, Burhanudin Sundu, Rusdi Rusdi, Sugiarto Sugiarto

Jurnal Ilmu Ternak Universitas Padjadjaran

Feed plays a paramount role in supporting growth, metabolism, and production performance. Their high price encourages the utilization of inexpensive and alternative feed ingredients. PKM, one such feed ingredient, is produced by palm oil industries. However, there is still a very limited application because of its high crude fiber content, which needs processing technologies like pelletization with binder addition. Based on this background, this experiment has been conducted to study the effect of various types of natural and commercial binders in 15% PKM-based pellets on performance and nutrient digestibility of broilers. The study was done for five weeks using 150 …

Evaluating The Impact Of K135t Mutation On Malate Dehydrogenase Kinetic Activity, Emily Frost, Kaitlyn Mello

Undergraduate Research Symposium (2026- )

Malate Dehydrogenase (MDH) is a key protein in the citric acid cycle; its dysregulation can have catastrophic impacts, such as neurological and metabolic disorders, and various cancers. MDH catalyzes the reversible oxidation-reduction reaction between malate and oxaloacetate, also reducing NAD+ to NADH in the process. The citric acid cycle is one of the central metabolic pathways, connecting to other essential pathways, such as amino acid and fatty acid biosynthesis, highlighting the importance of understanding how MDH works. A key site in MDH is the flexible loop region (amino acids 119-137), responsible for substrate binding, catalysis, and orientation. The flexibility of …

Characterizing The Macroinvertebrate Community In Crissy Lake, An Impounded Reach Of The Pomme De Terre River, Prior To Channel Modification, Max Lundgren

Undergraduate Research Symposium (2026- )

The aging Crissy Lake Dam, on the Pomme de Terre River in Morris, has altered natural stream flow and impeded upstream passage of several fish species since 1939. In late 2026 the Minnesota Department of Natural Resources will replace the dam with stone arch rapids and facilitate river channel formation upstream of the dam. In order to evaluate the river modification project, we characterized the macroinvertebrate community in Crissy Lake, the impoundment upstream of the dam before implementation of channel modification. In September 2025 we collected benthic macroinvertebrates from two sets of Ekman grab samples. We found 12 taxa (average …

Proline To Serine Mutation In Flexible Loop Region Of Malate Dehydrogenase, Anna Molstad, Hannah Robertson

Undergraduate Research Symposium (2026- )

Malate Dehydrogenase (MDH) is an essential enzyme that converts malate to oxaloacetate using the reduction of NAD+ to NADH. In humans, MDH plays a role in energy metabolism by catalyzing a key step of the citric acid cycle, important for energy production. Other indirect roles for MDH include gluconeogenesis and reoxidizing NADH from fatty-acid β-oxidation. An important feature of MDH is a flexible loop region that can alter substrate binding and enzyme activity, but its role is not well understood. Our study investigated how Pro123 to Ser (P123S) mutation in the flexible loop region affects MDH function. We hypothesized that …

Evaluating Differences In The Dynamic Growth Patterns Of Cvi And Ler Genetic Strains Of Arabidopsis During Seedling Establishment, Emily Frost

Undergraduate Research Symposium (2026- )

Seedling establishment is the process by which seedlings transition from depending on seed nutrients to making their own through photosynthesis. An important aspect is photomorphogenesis, the growth of plants in response to light, transitioning from rapid embryonic stem growth to a slower rate focused on root growth and leaf formation. The process is influenced by many genetic and environmental factors, making better characterization essential to understand plant development. For our research, we examined the dynamic growth of two Arabidopsis genetic strains (Cvi and Ler) over time in response to darkness, then to the change in response when light is introduced. …