Digital Commons Network^™

An Energy-Efficient Media Access Control Protocol For Chain-Type Wireless Sensor Networks, Yu Wang, Chang Wen Chen

Electrical Engineering and Computer Science Faculty Publications

We present in this paper an energy efficient media access control (MAC) protocol for chain-type wireless sensor networks. The chain-type sensor networks are fundamentally different from traditional sensor networks in that the sensor nodes in this class of networks are deployed along narrow and elongated geographical areas and form a chain-type topology. Recently, we have successfully developed hierarchical network architecture, sensor deployment strategy, and corresponding network initialization and operation protocols for this class of sensor networks. In this paper, we present a novel TDMA scheduling protocol that takes full advantages of the available channel reuse inherent in the chain-type sensor …

Rotational Legged Locomotion, Damian M. Lyons, Kiran Pamnany

Faculty Publications

In this paper we presented a novel, agile robot mechanism, which we call a rotopod, which combines aspects of wheeled and legged locomotion. A general description of how a tripedal rotopod can be made to step, rotating the mechanism about one leg, and moving the center of the mechanism, is presented. The concept of a gait for this mechanism is defined, and is used to show how extremely agile the mechanism can be. Specific resistance is employed as a way to explore the relative efficiency of this mechanism versus a wheel. Finally, we describe our first prototype rotopod and report …

Uranium Geochemistry In Vadose Zone And Aquifer Sediments From The 300 Area Uranium Plume, John M. Zachara, J. A. Davis, James Mckinley, D. M. Wellman, Chongxuan Liu, N. Qafoku, S. B. Yabusaki

United States Department of Energy: Publications

In 1996, an interim record of decision was issued for the 300-FF-5 Operable Unit on the Hanford Site in southeast Washington State. The record of decision specified the interim remedy as (1) continued monitoring of groundwater and (2) institutional controls to restrict groundwater use. This record of decision was based on a remedial investigation that suggested levels of uranium would decrease with time because of natural geochemical and hydrologic processes. A prediction was made that concentrations of uranium would decrease to the proposed drinking water standard or lower (20 μg/L) in 3 to 10 years from 1993. This prediction has …

Organization And Signal Processing Of The Descending Tracts In The Cervical Spinal Cord, Yanmei Tie

Doctoral Dissertations

This dissertation addresses the research for the development of spinal cord-computer interface (SCCI). The main objective of SCCI is to generate voluntary motor control signals for individuals with spinal cord injury (SCI).

In the neuroscience aspect, organization of the fibers in the descending tracts of the dorsolateral funiculus of the cervical spinal cord was investigated in cats. The spinal cord was penetrated with silicon substrate microelectrodes at 400 μm intervals in the medio-lateral direction at the C5/C6 and C6/C7 segmental borders. The stimulus consisted of a 20 ms train of charge-balanced biphasic pulses at 330 Hz. The evoked activities from …

Dna-Templated Assembly Of Metallic Nanowires, Qun Gu

Doctoral Dissertations

Nanowires are widely recognized as key elements in the development of futuristic nanoscale devices of nanoelectronics, optoelectronics and nano-electro-mechanic systems. Lithographic fabrication, however, faces increasing difficulties in the realization of continuously miniaturized features. The “Bottom-up” approach is a promising successor to lithography for fabrication of nanostructures. DNA is a natural template for nanowire assembly. The linear polynucleotide chain has a width of 2 nm and a length of 0.34 run per nucleoside subunit.

One-dimensional magnetic Co and Ni nanoparticles have been assembled in-situ for the first time by use of single DNA molecules as templates. Target metallic nanowires that are …

Fine-Tuning Of Mass-Spring Model Properties For Simulating Realistic Soft Body Deformation, Sylva A. Girtelschmid

Computational Modeling & Simulation Engineering Theses & Dissertations

Obtaining a well behaved soft-tissue model is one of the most challenging and important tasks in the development of surgical simulation systems. Achieving both accurate and real-time deformation response from a soft-tissue model becomes more difficult as the complexity of the represented anatomy and the degree of deformation increases. One common approach to modeling deformable objects is the Mass-Spring (MS) system method. Mass-Spring systems are attractive to real-time applications due to their relatively low computational requirement and ease of implementation. However, their parameter determination is typically done manually, which becomes tedious when accurate approximation to real-world objects is desired. This …

A Feature Specific Modular Approach For Pose And Illumination Invariant Face Recognition, Praveen Sankaran

Electrical & Computer Engineering Theses & Dissertations

A feature specific modular-PCA (Principal Component Analysis) approach on face images in multiple views for pose and illumination invariant face recognition is presented in this thesis. Principal components are extracted from different sub-modules of the image and are concatenated to make a single signature vector to represent a face region in a particular viewing angle. Additional principal components are extracted horn image regions representing key facial feature and are added as an extension of the signature vector. Feature specific modular-PCA approach is capable of recognizing faces in varying illumination conditions and facial expressions as the modular components represent the local …

The Phosphoglycolate Phosphatase Gene And The Mutation In The Phosphoglycolate Phosphatase-Deficient Mutant (Pgp1-1) Of Chlamydomonas Reinhardtii, Kensaku Suzuki, Hidenobu Uchida, Tarlan G. Mamedov

Papers in Biochemical Engineering

The sequences of the phosphoglycolate phosphatase (PGPase) gene Pgp1 and the 5′-upstream region from Chlamydomonas reinhardtii wildtype 2137 and the pgp1-1 mutant N142 that lacks the activity of PGPase (PGP1) were determined. The comparison revealed the alteration of a G to A at position 98 relative to the start codon. This destroyed the “GT” splice donor site at the beginning of the first intron of this gene, resulting in an extension of the first exon to 49 translatable codons followed by a stop codon, containing the codons corresponding to whole transit peptide for the chloroplast stroma and the first four …

Time-Domain Isolated Phoneme Classification Using Reconstructed Phase Spaces, Michael T. Johnson, Richard J. Povinelli, Andrew C. Lindgren, Jinjin Ye, Xiaolin Liu, Kevin M Indrebo

Electrical and Computer Engineering Faculty Research and Publications

This paper introduces a novel time-domain approach to modeling and classifying speech phoneme waveforms. The approach is based on statistical models of reconstructed phase spaces, which offer significant theoretical benefits as representations that are known to be topologically equivalent to the state dynamics of the underlying production system. The lag and dimension parameters of the reconstruction process for speech are examined in detail, comparing common estimation heuristics for these parameters with corresponding maximum likelihood recognition accuracy over the TIMIT data set. Overall accuracies are compared with a Mel-frequency cepstral baseline system across five different phonetic classes within TIMIT, and a …

Modular Neural Network To Predict The Distribution Of Nitrate In Ground Water Using On-Ground Nitrogen Loading And Recharge Data, M. Almasri, Jagath J. Kaluarachchi

Civil and Environmental Engineering Faculty Publications

Artificial neural networks have proven to be an attractive mathematical tool to represent complex relationships in many branches of hydrology. Due to this attractive feature, neural networks are increasingly being applied in subsurface modeling where intricate physical processes and lack of detailed field data prevail. In this paper, a methodology using modular neural networks (MNN) is proposed to simulate the nitrate concentrations in an agriculture-dominated aquifer. The methodology relies on geographic information system (GIS) tools in the preparation and processing of the MNN input–output data. The basic premise followed in developing the MNN input–output response patterns is to designate the …

Opal: In Vivo Based Preservation Framework For Locating Lost Web Pages, Terry L. Harrison

Computer Science Theses & Dissertations

We present Opal, a framework for interactively locating missing web pages (http status code 404). Opal is an example of "in vivo" preservation: harnessing the collective behavior of web archives, commercial search engines, and research projects for the purpose of preservation. Opal servers learn from their experiences and are able to share their knowledge with other Opal servers using the Open Archives Initiative Protocol for Metadata Harvesting (OAI-PMH). Using cached copies that can be found on the web, Opal creates lexical signatures which are then used to search for similar versions of the web page. Using the OAI-PMH to facilitate …

Waldo Lake Research In 2004, Mark D. Sytsma, John Rueter, Richard Petersen, Roy Koch, Scott A. Wells, Michelle Wood, Yangdong Pan, Robert Leslie Annear, Aaron Hook, Laura Johnson, Rich Miller, Amanda Murphy, Terry Stoltz

Center for Lakes and Reservoirs Publications and Presentations

The Willamette National Forest has worked with Portland State University, Center for Lakes and Reservoirs (PSU) and the University of Oregon (UO) to investigate ecosystem changes, provide guidance on long-term monitoring methods, assess monitoring data, develop predictive water quality models, and conduct research that will lead to better protection and understanding of the Waldo Lake ecosystem. This report summarizes the second year of collaborative PSU-UO research at Waldo Lake. Research has focused on understanding physical, chemical and biological characteristics of Waldo Lake across a range of spatial and temporal scales. Research tasks that continued from 2003 into 2004 included temperature …

Coupling Between Lysozyme And Glycerol Dynamics: Microscopic Insights From Molecular-Dynamics Simulations, Taner E. Dirama, Gustavo A. Carri, Alexei P. Sokolov

College of Polymer Science and Polymer Engineering

We explore possible molecular mechanisms behind the coupling of protein and solvent dynamics using atomistic molecular-dynamics simulations. For this purpose, we analyze the model protein lysozyme in glycerol, a well-known protein-preserving agent. We find that the dynamics of the hydrogen bond network between the solvent molecules in the first shell and the surface residues of the protein controls the structural relaxation (dynamics) of the whole protein. Specifically, we find a power-law relationship between the relaxation time of the aforementioned hydrogen bond network and the structural relaxation time of the protein obtained from the incoherent intermediate scattering function. We demonstrate that …

Integration Of Computer-Based Electronics Laboratory In A Control Systems Course, Julio Garcia, Patricia Backer

Faculty Publications

The goal of this project is to adapt the work of other researchers to improve the delivery of electronics lecture and laboratory content in the Electronics & Computer Technology (ECT) area of the BS in Industrial Technology at San Jose State University. There are several other demographic factors that serve to make the delivery of instruction challenging for the department. Approximately 70% of ECT students work at least 30 hours a week. SJSU also has a diverse student population with 62% of all undergraduates identified as having non-White ethnicity. A higher percentage (69%) of the undergraduate students in the BSIT …

Mathematical Modeling Of Deposition Of Carbonaceous Material From Heavy Hydrocarbon Vapors, Wenxing Zhang, A. Paul Watkinson

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Deposition From Crude Oils In Heat Exchangers, A. Paul Watkinson

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

A Preliminary Study Of The Effect Of Surface Coating On The Initial Deposition Mechanisms Of Dairy Fouling, S. S. Ramachandra, S. Wiehe, M. M. Hyland, X. D. Chen, B. Bansal

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Blending Effects On Fouling Of Four Crude Oils, Z S. Saleh, R. Sheikholeslami, A. Paul Watkinson

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Today’S Techniques For Heat Exchanger Protection Via Particle Filtration, Kathy Colby, Caroline Hoffman

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Fouling Of Heat Exchangers By Dairy Fluids – A Review, Bipan Bansal, Xiao Dong Chen

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Calcium Sulfate Scaling Delay Times Under Sensible Heating Conditions, F. Fahiminia, A. Paul Watkinson, N. Epstein

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Economic And Performance Evaluation Of Two Oxidising Biocides In Sea-Water Cooling Systems, T. Casanueva-Robles, E. Nebot, J. F. Casanueva, M. M. Fernández-Bastón

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Effect Of Polarization On Manganese Biofouling Of Heat Exchanger Surfaces, T. Kuosmanen, M. Peltola, M. Raulio, M. Pullainen, T. Laurila, J-F Selin, H. Huopalainen, M. Salkinoja-Salonen

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Optimised Heat Exchanger Management - Achieving Financial And Environmental Targets, S. Rädler, U. Ousko-Oberhoffe

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Fouling Mitigation By Design, J. Nesta, C. A. Bennett

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Enhanced Heat Exchanger Tubes: Their Fouling Tendency And Potential Cleanup, George F. Hays, Edward S. Beardwood, Steven J. Colby

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Particulate Fouling In Micro-Structured Devices, N. Kockmann, M. Engler, P. Woias

Heat Exchanger Fouling and Cleaning - Challenges and Opportunities

No abstract provided.

Design, Fabrication, And Characterization Of An Electrostatically Actuated Microfluidic Valve, Ryan Dale Rivers

Master's Theses

Microfluidic device construction uses certain critical structures throughout many different applications. The valve structure remains one of the primary structures that present a barrier to miniaturization and portability. The extensive support devices required to power common microfluidic valves remove a significant amount of freedom from microfluidic device design. Moving to electrostatic methods of actuation could reduce the overall footprint of the microfluidic valve. This thesis covers three concept prototypes. Concept I presents an attempt at inlaying gold electrodes into polydimethylsiloxane substrates. Concept II attempts to use liquid silver injected into channels as electrode materials. Concept III uses aluminum sputtering to …

Stability Of Transport And Rate Processes [Review], Yaşar Demirel

Papers in Thermal Mechanics

About fifty years ago, the Turing instability demonstrated that even simple reaction-diffusion systems might lead to spatial order and differentiation, while the Rayleigh-Bénard instability showed that the maintenance of nonequilibrium might be the source of order in fluids subjected to a thermodynamic force above a critical value. Therefore, distance from global equilibrium in the form of magnitude of a thermodynamic force emerges as another constraint of stability; some systems may enhance perturbations, and evolve to highly organized states called the dissipative structures after a critical distance on the thermodynamic branch. Although the kinetics and transport coefficients represent short-range interactions, chemical …

Chromatographic Purification Of Mabs With Non-Affinity Supports, Anuradha Subramanian

Papers in Biotechnology

The introduction of new protein-based therapeutics such as monoclonal antibodies (MAbs), MAb-based vaccines, growth factors and plasma proteins implies the need to study, characterize, and purify. The separation step is likely to be a bottleneck and cost-effective technology will be needed to rectify it. The currently prevalent matrices for chromatographic separation of immunoglobulins (Igs) are based on Protein A or its recombinant versions (Protein G). They display excellent selectivity and specificity, but are expensive. A Protein A matrix costs $8,000 to 12,000 per L-resin. The typical production column volume is 100 L. The million-dollar matrix is far more expensive than …