Digital Commons Network^™

Aquatic Insect Community Structure And Secondary Production In Southcentral Alaska Streams With Contrasting Thermal And Hydrologic Regimes, Samantha D. Hertel

Master's Theses

Streams along the Copper River Delta, southcentral Alaska, exhibit contrasting thermal and hydrologic variability associated with being primarily groundwater-fed (GWF) or surface water-fed (SWF). Groundwater-fed streams are predictable both thermally and hydrologically year round, whereas SWF streams are unpredictable and exhibit more variable thermal and hydrologic regimes. These differences may strongly influence aquatic insect community structure and secondary production. Four streams, two GWF and two SWF, were sampled twice monthly from late April 2013 through August 2013 and once seasonally in fall (September) and early winter (November). Aquatic insect community structure differed markedly in both hydrologic types. Taxa richness was …

Early Round Goby (Neogobius Melanostomus) Invasion Into Lake Michigan Tributaries And Competitive Interactions With Two Native Benthic Fishes., Margaret Ann Malone

Master's Theses

The round goby is a prolific invasive species and is currently spreading into Great Lake tributary streams. There is a high potential for negative impacts on native benthic fishes in these stream habitats and the aim of this study is to assess the impacts of the round goby on two native darter species in particular (johnny darter and blackside darter). I review the history of round goby invasion in the Great Lakes and summarize hypotheses of the invasive characters of the round goby. Using game theory, I provide a G-function approach to understanding the outcomes of the round goby invasion …

Ship-Induced Depression Wakes And Shoreline Erosion, Luca Zaggia, Giuliano Lorenzetti, Georgia Manfe, Gian Marco Scarpaf, K. E. Parnell, John Rapaglia, E. Molinaroli

Biology Faculty Publications

Shoreline retreat as an effect of ship wakes was studied in a navigation channel of the industrial port of Venice, Italy: the Malamocco -Marghera Channel. The investigation revealed unprecedented erosion rates, up to 4 m y , that determined a total loss of about 1.2 million of m of soil in the period 1970 -2015. This interaction between navigation and the channel margins must be considered in order to understand the past evolution of the central Venice Lagoon and for a sustainable management of the port traffic in the future sea -level rise scenario.

Upper Thermal Limits Differ Among Component Species In A Host-Parasitoid-Hyperparasitoid System, Kanchan A. Joshi

Theses and Dissertations

Among the predicted impacts associated with global climate change, warming is of special interest because the rates of physiological processes are temperature-dependent. Insects and other ectotherms are likely to be affected due to their limited ability to control body temperature. In this study, I measured the tolerance to extreme high temperatures, i.e., critical thermal maximum (CT_max), of component species in a tri-trophic system, including an herbivore (Manduca sexta), a primary larval parasitoid (Cotesia congregata) and a hyperparasitoid (genus Silochalcis). For wild insects, the parasitoid had the lowest CT_max, the hyperparasitoid had …

The Microbiome In Light Of Host Evolution, Alexander M. Waldrop Jr.

Theses and Dissertations

Recent advances in sequencing technologies have provided an unprecedented window in the unseen biological world. Accompanying this revolution is a growing appreciation for the ubiquity and diversity of beneficial interactions between animals and the microbes they carry. Given the symbiotic roles of microbes in host nutrition, immunity, behavior, development, and nearly every other facet of host biology, it is becoming increasingly clear that any understanding of hosts and their evolution would be incomplete without also considering the microbial dimension. Yet despite the growing body of evidence that many of these partnerships are rooted deep in evolutionary time, the majority of …

Genome Wide Epigenetic Analyses Of Araptus Attenuatus, A Bark Beetle, Chitra Seshadri

Theses and Dissertations

Phylogeographic studies have relied on surveying neutral genetic variation in natural populations as a way of gaining better insights into the evolutionary processes shaping present day population demography. Recent emphasis on understanding putative adaptive variation have brought to light the role of epigenetic variation in influencing phenotypes and the mechanisms underlying local adaptation. While much is known about how methylation acts at specific loci to influence known phenotypes, there is little information on the spatial genetic structure of genome-wide patterns of methylation and the extent to which it can extend our understanding of both neutral and putatively adaptive processes. This …

Influence Of Historic Landscapes And Contemporary Species Management On Chesapeake Bay Bald Eagles And Osprey, Catherine B. Viverette

Theses and Dissertations

Influence of historic landscapes and contemporary species management on Chesapeake Bay Bald Eagles and Osprey

Catherine B. Viverette

Co-distributed species with well documented demographic histories can provide good models for testing alternative hypotheses about the impact of evolutionary history, contemporary landscapes, and species management on current distribution and population structure. The Osprey (Pandion haliaetus) and Bald Eagle (Haliaeetus leucocephalus) have been extensively studied, managed and monitored across their North American breeding range, particularly in the Chesapeake Bay. We used a combination of ecological niche modelling, diet reconstruction, and population genetic modeling to understand the role of …

The Curiosity Of Con, Petrified Breath, And An Accident Known As Blue., Steven Randall

Theses and Dissertations

My thesis installation emerged from an interest in visualizing breath. The resulting work came to exist at the intersection between art, biology, and performance.

The unicorn tapestries were used as a generative point of departure to explore the preservation and transformation of images through time, by time, and with time. Reproductions of the six tapestries were each etched into paper and then submerged into solutions of Phenol Red dye, Ferric Ferrocyanide (also known as Prussian Blue), and various forms of sodium chloride. Exhaled breath was used to encrust these images of the tapestries into physical objects which gradually crystallized and …

The Effects Of Tidal Forcing On Nutrient Fluxes In The Tidal, Freshwater James River Estuary, Va, Dana L. Devore

Theses and Dissertations

A 12-month study (January to December 2015) focused on the effects of tidal forcing on nutrient fluxes in the tidal, freshwater segment of the James River Estuary (JRE). Discrete sampling of nutrient chemistry and continuous monitoring of tidal discharge were used to determine the volume and timing of the tides, and differences in nutrient concentrations between incoming and outgoing tides. The goal of this study was to improve understanding of tidal influence on nutrient fluxes and their role in nutrient transport to the lower estuary. Results suggested that differences in nutrient concentrations between incoming and outgoing tides were small throughout …

Forest Stand Structure And Primary Production In Relation To Ecosystem Development, Disturbance, And Canopy Composition, Cynthia M. Scheuermann

Theses and Dissertations

Temperate forests are complex ecosystems that sequester carbon (C) in biomass. C storage is related to ecosystem-scale forest structure, changing over succession, disturbance, and with community composition. We quantified ecosystem biological and physical structure in two forest chronosequences varying in disturbance intensity, and three late successional functional types to examine how multiple structural expressions relate to ecosystem C cycling. We quantified C cycling as wood net primary production (NPP), ecosystem structure as Simpson’s Index, and physical structure as leaf quantity (LAI) and arrangement (rugosity), examining how wood NPP-structure relates to light distribution and use-efficiency. Relationships between structural attributes of biodiversity, …

The Importance Of Motivation, Weapons, And Foul Odors In Driving Encounter Competition In Carnivores, Maximilian L. Allen, Christopher C. Wilmers, L. Mark Elbroch, Julie M. Golla, Heiko U. Wittmer

Environment and Society Faculty Publications

Encounter competition is interference competition in which animals directly contend for resources. Ecological theory predicts the trait that determines the resource holding potential (RHP), and hence the winner of encounter competition, is most often body size or mass. The difficulties of observing encounter competition in complex organisms in natural environments, however, has limited opportunities to test this theory across diverse species. We studied the outcome of encounter competition contests among mesocarnivores at deer carcasses in California to determine the most important variables for winning these contests. We found some support for current theory in that body mass is important in …

What’S The Common Sense Of Just Some Improvement Of Some Welfare For Some Animals?, Liv Baker

Animal Sentience

The goal of Animal Welfare Science to reduce animal suffering is commendable but too modest: Suffering animals need and deserve far more.

Pain In Parallel, Peter Godfrey-Smith

Animal Sentience

Key's (2016) arguments against the view that fish feel pain can be shown to be fallacious by considering some damage-related behaviors in invertebrates. Pain may have different neural bases in different organisms, so the absence in fish of the cortical structures that might underlie pain in mammals does not settle the question of fish pain.

Nonverbal Indicators Of Pain, Simon Van Rysewyk

Animal Sentience

In discussing fish pain, Key (2016) privileges pain in humans — “the only species able to directly report on its feelings.” Human experience of pain is not necessarily best reflected by verbal self-report, however. Neural responses to noxious stimuli are influenced by individual differences and by context. Nonverbal pain displays such as facial expressions reflect part of the neural response to noxious stimuli. Most mammals have a specific facial grimace reflecting pain. If fish have a somatic expression of pain, the development of a reliable and accurate somatic pain scale specific to fish could make a contribution to the debate …

Spinning Our Wheels And Deepening The Divide: Call For An Evidence-Based Approach To The Fish Pain Debate, Steven J. Cooke

Animal Sentience

There is vigorous ongoing debate about whether fish feel pain and have the capacity to suffer. The body of literature dedicated to the topic is increasing but what is particularly problematic is that the majority of the contributions represent opinion pieces and thus fall within the realm of advocacy. Many of the empirical research papers purporting that fish do or do not feel pain have problems with cavalier use of definitions, poor experimental design, or statistical/technical issues and tend to include advocacy statements in their interpretations. Rather than continuing to spin our wheels and deepen the divide, I would advocate …

Chemically-Mediated Prey Responses: Invasive Brook Stickleback Induced Changes In Behavior And Life History Of Larval Long-Toed Salamanders, Renae K. Reed

EWU Masters Thesis Collection

"The purpose of this research was to assess the predator-induced responses of a larval amphibian to its natural predators and to an unfamiliar fish. Amphibians express chemically-mediated antipredator defenses in behavior, morphology and life history, and are currently threatened with predation by invasive fish. To investigate this issue, we first initiated a behavioral assay to test the null hypotheses that predator type and diet have no effect on long-toed salamander (Ambystoma macrodactylum) behavior. We exposed individual replicate A. macrodactylum to chemical cues (kairomones) from garter snakes (Thamnophis elegans), tiger salamanders (A. tigrinum) and brook stickleback (Culaea inconstans), which had been …

Invertebrate Drift In The Upper Columbia River With Implications For Young-Of-The-Year White Sturgeon, Ryan W. Reihart

EWU Masters Thesis Collection

"White sturgeon (Acipenser transmontanus) in the upper Columbia River have been in decline for over 60 years and are listed as critically endangered by the International Union for Conservation of Nature. Annual spawning produces dispersing larvae; however, recruitment into the juvenile age class has not occurred since the early 1970s. One hypothesis to explain this failure in recruitment is that larvae may not find adequate prey. Little is known about diet and prey availability for white sturgeon larvae, especially in Lake Roosevelt, a reservoir of the Columbia River. The Spokane Tribe of Indians collected littoral and mid-channel benthic drift samples …

The Contribution Of Marine Aggregate-Associated Bacteria To The Accumulation Of Pathogenic Bacteria In Oysters: An Agent-Based Model, Andrew M. Kramer, J. Evan Ward, Fred C. Dobbs, Melissa L. Pierce

OES Faculty Publications

Bivalves process large volumes of water, leading to their accumulation of bacteria, including potential human pathogens (e.g., vibrios). These bacteria are captured at low efficiencies when freely suspended in the water column, but they also attach to marine aggregates, which are captured with near 100% efficiency. For this reason, and because they are often enriched with heterotrophic bacteria, marine aggregates have been hypothesized to function as important transporters of bacteria into bivalves. The relative contribution of aggregates and unattached bacteria to the accumulation of these cells, however, is unknown. We developed an agent-based model to simulate accumulation of vibrio-type bacteria …

A Highly Sensitive Underwater Video System For Use In Turbid Aquaculture Ponds, Chin-Chang Hung, Shih-Chieh Tsao, Kuo-Hao Huang, Hsu-Kunag Chang, Fred C. Dobbs

OES Faculty Publications

The turbid, low-light waters characteristic of aquaculture ponds have made it difficult or impossible for previous video cameras to provide clear imagery of the ponds' benthic habitat. We developed a highly sensitive, underwater video system (UVS) for this particular application and tested it in shrimp ponds having turbidities typical of those in southern Taiwan. The system's high-quality video stream and images, together with its camera capacity (up to nine cameras), permit in situ observations of shrimp feeding behavior, shrimp size and internal anatomy, and organic matter residues on pond sediments. The UVS can operate continuously and be focused remotely, a …

Effects Of Temperature, Irradiance And Pco2 On The Growth And Nitrogen Utilization Of Prorocentrum Donghaiense, Zhangxi Hu, Margaret R. Mulholland, Ning Xu, Shunshan Duan

OES Faculty Publications

Environmental factors such as temp erature, irradiance, and nitrogen (N) supply affect the growth of Prorocentrum donghaiense, but the interactive effects of these physical factors and the effects of atmospheric CO₂ (pCO₂) on growth and N uptake have not been examined. We compared growth kinetics of P. donghaiense grown on 4 different N substrates (nitrate [NO₃ -], ammonium [NH₄ +], urea, and glutamic acid [glu]) with respect to temperature, irradiance, and pCO₂. Temperature (15 to 30°C) had a positive effect on growth (max. growth rates: 0.17 to 0.65 d …

Assemblage Structure, Production, And Food Web Dynamics Of Macroinvertebrates In Tropical Island Headwater Streams, Keysa G. Rosas-Rodriguez

College of Graduate Studies: Theses & Dissertations

Variation in long-term temperature and precipitation patterns will likely influence the decomposition and export of benthic organic matter and influence aquatic macroinvertebrate consumer communities. Tropical systems are relatively understudied; therefore basal information is urgently needed. As part of an ongoing long-term study, we monitored macroinvertebrates in two shrimp-dominated and fishless headwater streams within the Luquillo Experimental Forest in Puerto Rico from 2009-2010. We combined growth rates with yearly biomass data to calculate secondary production and examined gut contents to develop quantitative food webs. Macroinvertebrate assemblages were dominated by a few insect taxa, with similar biotic composition across streams and habitats, …

The Nutritional Value Of Fecal Sacs: Testing The Parental Nutrition Hypothesis, Amanda W. Burns

College of Graduate Studies: Theses & Dissertations

Nest sanitation is an important aspect of parental investment in birds with altricial nestlings. Passerine nestlings produce fecal matter that is encased in a mucous membrane for easy disposal. These fecal sacs are either removed from the nest and transported a distance away or they are ingested by the adult. A decline in fecal sac ingestion rates as nestlings age has been observed in several species. The parental nutrition hypothesis posits that this pattern can be attributed to increasing digestive efficiency as nestlings age. The parental nutrition hypothesis makes three predictions: fecal sac consumption rates should decrease as nestlings age, …

The Effects Of Thermal Opportunity And Habitat On Physiological Performance In Ecologically Distinct Populations Of The Florida Scrub Lizard Sceloporus Woodi, Lauren K. Neel

College of Graduate Studies: Theses & Dissertations

An ectotherm’s ability to thermoregulate affects many physiological traits. Therefore, thermal factors are paramount when considering behavior, activity time, body temperatures, energy budget, and performance capabilities. The Florida scrub lizard (Sceloporus woodi) is a ground-dwelling lizard that occupies longleaf pine and sand pine scrub habitats in the Ocala National Forest. Here, this species’ habitat is maintained by either clear-cut logging in scrub stands, or prescribed burning in long leaf pine stands. These habitat types differ in their dominant vegetation, canopy cover, and availability of vertical perches and thus are ecologically different. I used biophysical models to measure the …

Key Biogeochemical Factors Affecting Soil Carbon Storage In Posidonia Meadows, Oscar Serrano, Aurora M. Ricart, Paul S. Lavery, Miguel-Angel Mateo, Ariane Arias-Ortiz, Pere Masque, Mohammad Rozaimi, Andy D. L. Steven, Carlos Duarte

Research outputs 2014 to 2021

Biotic and abiotic factors influence the accumulation of organic carbon (C_org) in seagrass ecosystems.We surveyed Posidonia sinuosa meadows growing in different water depths to assess the variability in the sources, stocks and accumulation rates of C_org. We show that over the last 500 years, P. sinuosa meadows closer to the upper limit of distribution (at 2-4m depth) accumulated 3- to 4-fold higher C_org stocks (averaging 6.3 kgC_org m^-2) at 3- to 4-fold higher rates (12.8 gC_org m^-2 yr^-1/ compared to meadows closer to the deep limits of distribution …

Can Mud (Silt And Clay) Concentration Be Used To Predict Soil Organic Carbon Content Within Seagrass Ecosystems?, Oscar Serrano, Paul Lavery, Carlos Duarte, Gary A. Kendrick, Antoni M. Calfat, P. H. York, Andy D. Steven, Peter I. Macreadie

Research outputs 2014 to 2021

The emerging field of blue carbon science is seeking cost-effective ways to estimate the organic carbon content of soils that are bound by coastal vegetated ecosystems. Organic carbon (C_org) content in terrestrial soils and marine sediments has been correlated with mud content (i.e., silt and clay, particle sizes < 63 µm), however, empirical tests of this theory are lacking for coastal vegetated ecosystems. Here, we compiled data (n =  1345) on the relationship between C_org and mud contents in seagrass ecosystems (79 cores) and adjacent bare sediments (21 cores) to address whether mud can be used to predict soil C_org content. We also combined these data with the δ¹³C signatures of the soil …

Coastal Connectivity And Spatial Subsidy From A Microbial Perspective, Christin Säwström, Glenn A. Hyndes, Bradley D. Eyre, Megan J. Huggett, Matthew W. Fraser, Paul S. Lavery, Paul G. Thomson, Flavia Tarquinio, P. D. Steinberg, Bonnie Laverock

Research outputs 2014 to 2021

The transfer of organic material from one coastal environment to another can increase production in recipient habitats in a process known as spatial subsidy. Microorganisms drive the generation, transformation, and uptake of organic material in shallow coastal environments, but their significance in connecting coastal habitats through spatial subsidies has received limited attention. We address this by presenting a conceptual model of coastal connectivity that focuses on the flow of microbially mediated organic material in key coastal habitats. Our model suggests that it is not the difference in generation rates of organic material between coastal habitats but the amount of organic …

Accelerating Tropicalization And The Transformation Of Temperate Seagrass Meadows, Glenn A. Hyndes, Kenneth L. Heck, Jnr, Adriana Verges, Euan S. Harvey, Gary A. Kendrick, Paul Lavery, Kathryn Mcmahon, Robert J. Orth, Alan Pearce, Mathew Vanderklift, Thomas Wernberg, Scott Whiting, Shaun Wilson

Research outputs 2014 to 2021

Climate-driven changes are altering production and functioning of biotic assemblages in terrestrial and aquatic environments. In temperate coastal waters, rising sea temperatures, warm water anomalies and poleward shifts in the distribution of tropical herbivores have had a detrimental effect on algal forests. We develop generalized scenarios of this form of tropicalization and its potential effects on the structure and functioning of globally significant and threatened seagrass ecosystems, through poleward shifts in tropical seagrasses and herbivores. Initially, we expect tropical herbivorous fishes to establish in temperate seagrass meadows, followed later by megafauna. Tropical seagrasses are likely to establish later, delayed by …

Exploring How First-Year Experiences In Higher Education Influence Student Acceptance Of Biological Evolutionary Theory, Lauren A. Winter

Dissertations and Theses @ UNI

In the current study, I investigated whether changes occurred in the acceptance of evolution for students majoring in elementary education during their first semester of college and if so, what factors influenced the change. Thirty participants in their first semester of college completed pre-and post-tests that included the Inventory of Student Evolution Acceptance to measure changes in student acceptance of evolution over the course of one academic semester. Ten of those participants completed interviews to elaborate on those factors that may have affected their acceptance in evolution. Mixed methods analysis utilizing a cognitive constructivist framework revealed that religious beliefs, explicit …

Density And Diversity Of Bees In The Midwestern Agricultural Landscape: Influence Of Surrounding Agricultural Land Use And Local Plant Community Characteristics, Andrew J. Ridgway

Dissertations and Theses @ UNI

After over a century of large-scale agricultural development in the Midwestern corn-belt of the United States, many wild bee pollinator populations are in rapid decline or extirpated from their historic range. Large-bodied species, such as Bombus spp. are especially threatened, but are also valuable as efficient natural pollinators that are capable of effectively pollinating many economically important crops. Bees, therefore, have high conservation value, and pollination research has shifted focus from community inventory to population recovery efforts. These efforts include reducing the effects of habitat fragmentation and destruction using ecological restoration as well as integrating conservation strategies into agricultural land …

Analyzing Winter Migration Fidelity And Movement Of The Wild Taimyr Reindeer Herd, Rangifer T. Tarandus, Emily T. Francis

Dissertations and Theses @ UNI

The Taimyr Reindeer Herd (TRH) is the largest wild reindeer population in the world, and is located in the northern central region of Arctic Russia. Previous detailed research on the spatiotemporal dynamics of this herd have been conducted involving aerial population censuses for two of the three seasons for reindeer: calving (Meerdink, 2012) and summer (Cooney, 2014). The first part of this study continues with the methods of the previous studies, analyzing the spatiotemporal fidelity of the TRH in the winter season. This was completed using geospatial analysis of digitized historical aerial census data of reindeer locations, and analyzing areas …