Open Access. Powered by Scholars. Published by Universities.®

Digital Commons Network™

Open Access. Powered by Scholars. Published by Universities.®

Ecology and Evolutionary Biology

Institution
Keyword
Publication Year
Publication
Publication Type
File Type

Articles 11191 - 11220 of 19730

Full-Text Articles in Entire DC Network

Pain And Other Feelings In Humans And Animals, Antonio Damasio, Hanna Damasio Jan 2016

Pain And Other Feelings In Humans And Animals, Antonio Damasio, Hanna Damasio

Animal Sentience

Evidence from neuroanatomy, neurophysiology, and neuropsychology suggests that the experience of feelings in humans does not depend exclusively on structures of the cerebral cortex. It does not seem warranted to deny the possibility of feeling in animals on the grounds that their cerebral cortices are not comparable to those of humans.


Where Is Pain In The Brain?, Marshall Devor Jan 2016

Where Is Pain In The Brain?, Marshall Devor

Animal Sentience

Key argues that fish cannot experience pain based on (1) brain imaging in humans, (2) consequences of lesions and (3) direct brain stimulation. Imaging indeed shows that pain-relevant signals reach the cortex, but not that they underlie the subjective experience of pain. Lesions and stimulation data are more to the point, but Key paints an idiosyncratic and misleading picture of their effects. S1 and S2 ablation does not eliminate evoked or spontaneous pain, although there may be up- or down-modulation. Likewise, stimulation of pain-associated cortical areas rarely induces pain, and pain almost never occurs at the onset of epileptic seizures. …


Fish Pain: Would It Change Current Best Practice In The Real World?, B. K. Diggles Jan 2016

Fish Pain: Would It Change Current Best Practice In The Real World?, B. K. Diggles

Animal Sentience

Much of the “fish pain debate” relates to how high the bar for pain should be set. The close phylogenetic affinities of teleosts with cartilaginous fishes which appear to lack nociceptors suggests caution should be applied by those who seek to lower the bar, especially given the equivocal and conflicting nature of the experimental data currently available for teleosts. Nevertheless, even if we assume fish “feel pain,” it is difficult to see how current best practice in aquaculture would change. This is because of the need to avoid stress at all stages of the rearing process to optimize health, growth …


Pain-Capable Neural Substrates May Be Widely Available In The Animal Kingdom, Edgar T. Walters Jan 2016

Pain-Capable Neural Substrates May Be Widely Available In The Animal Kingdom, Edgar T. Walters

Animal Sentience

Neural and behavioral evidence from diverse species indicates that some forms of pain may be generated by coordinated activity in networks far smaller than the cortical pain matrix in mammals. Studies on responses to injury in squid suggest that simplification of the circuitry necessary for conscious pain might be achieved by restricting awareness to very limited information about a noxious event, possibly only to the fact that injury has occurred, ignoring information that is much less important for survival, such as the location of the injury. Some of the neural properties proposed to be critical for conscious pain in mammals …


Going Beyond Just-So Stories, Brian Key Jan 2016

Going Beyond Just-So Stories, Brian Key

Animal Sentience

Colloquial arguments for fish feeling pain are deeply rooted in anthropometric tendencies that confuse escape responses to noxious stimuli with evidence for consciousness. More developed arguments often rely on just-so stories of fish displaying complex behaviours as proof of consciousness. In response to commentaries on the idea that fish do not feel pain, I raise the need to go beyond just-so stories and to rigorously analyse the neural circuitry responsible for specific behaviours using new and emerging technologies in neuroscience. By deciphering the causal relationship between neural information processing and conscious behaviour, it should be possible to assess cogently the …


Falsifying The Null Hypothesis That “Fish Do Not Feel Pain", Brian Key Jan 2016

Falsifying The Null Hypothesis That “Fish Do Not Feel Pain", Brian Key

Animal Sentience

The reader of Animal Sentience may surmise that because the weight of the commentaries on my target article, “Why fish do not feel pain,” is leaning towards not supporting my argument, it follows that the premise "fish do not feel pain" is incorrect. However, science does not prevail by popular opinion. History is plagued with numerous (and often widely accepted) examples of biological phenomena being explained by mysterious forces. In the absence of a mechanistic understanding, the many different guises of vitalism (the principle that life involves a vital energy) are often invoked to explain the unknown. Spurious …


How Not To Move The Line Drawn On Pain, Bjorn H. Merker Jan 2016

How Not To Move The Line Drawn On Pain, Bjorn H. Merker

Animal Sentience

In this second commentary I outline the inadequacy of Key's responses to the many peer critiques of his thesis that have so far appeared in Animal Sentience. I illustrate with examples drawn from his response to my first commentary.


Effects Of Visitors And Enrichments On Behavior Of Captive Red Wolves’ (Canis Rufus) At The Great Plains Zoo, Sioux Falls, South Dakota, Kylee S. Shotkoski Jan 2016

Effects Of Visitors And Enrichments On Behavior Of Captive Red Wolves’ (Canis Rufus) At The Great Plains Zoo, Sioux Falls, South Dakota, Kylee S. Shotkoski

Electronic Theses and Dissertations

Red wolves (Canis rufus) are the first animals to maintain a wild population from captive, released individuals. A captive breeding program for red wolves was started before complete extirpation, and 4 breeding pairs were released in Alligator River National Wildlife Refuge (North Carolina) in 1987 and a small wild population still exists there. Currently, there are several captive breeding facilities for red wolves within the Species Survival Plan (SSP) program. The Great Plains Zoo in Sioux Falls, South Dakota participates in the SSP program. My study was initiated to create a natural history background and evaluate interaction between …


Emergent Interactions Influence Functional Traits And Success Of Dune Building Ecosystem Engineers, Joseph K. Brown Jan 2016

Emergent Interactions Influence Functional Traits And Success Of Dune Building Ecosystem Engineers, Joseph K. Brown

Theses and Dissertations

Stability of coastal systems are threatened by oceanic and atmospheric drivers of climate change. Sea-level rise compounded with increased frequency and intensity of storms emphasizes need for protection of inner island systems by dune formations. Dune building processes are affected by interactions between growth of ecosystem engineering dune grasses and environmental factors associated with disturbance such as sand burial and salt spray. Climate change may also cause latitudinal expansion of some species, resulting in emergence of competitive interactions that were previously absent. Topographic structure of coastlines, traditionally influenced by sand burial, could change as a result of competition emergence. My …


Successional Changes In Leaf Nutrient Concentrations Of Woody And Herbaceous Species, Daniel Walter Kuchta Jan 2016

Successional Changes In Leaf Nutrient Concentrations Of Woody And Herbaceous Species, Daniel Walter Kuchta

Masters Theses

Leaf nutrient concentrations are an example of a functional trait, a trait that can be used to understand community dynamics by observing how plants interact with their environment. I explored how leaf nutrient concentrations were affected over successional time by environmental changes. The majority of prior research on functional traits focuses on either woody or herbaceous species, but not both life forms simultaneously. To address this, I also explored the successional changes to leaf nutrient concentrations, separating the plant community into woody and herbaceous species.

Healthy, mature leaves were taken from 122 taxa of woody and herbaceous species in a …


Low-Head Dams On Habitat, Fish Functional Guilds And Genetic Structuring In A Midwestern River System, Shannon Cassandra Frary Smith Jan 2016

Low-Head Dams On Habitat, Fish Functional Guilds And Genetic Structuring In A Midwestern River System, Shannon Cassandra Frary Smith

Masters Theses

The natural flow regime of the majority of rivers in the United States has been altered by anthropogenic structures. This loss of connectivity plays a strong role in shaping river ecosystems by altering physical habitat characteristics and shaping fish community assemblages. Although the impacts of large dams on river systems are well documented and often easy to observe, there are fewer studies on the effects of smaller low-head dams. Additionally, the influences of low-head dams on the genetic structuring of small-bodied riverine fishes have yet to be fully explored. I assessed the effects of two low-head dams on the Vermilion …


Demographics And Parasites Of Spotted Bass In The Wabash River, Evan C. Boone Jan 2016

Demographics And Parasites Of Spotted Bass In The Wabash River, Evan C. Boone

Masters Theses

Spotted Bass Micropterus punctulatus Rafinesque are a popular sport fish primarily found in the streams and reservoirs of the south. The Wabash River, a large tributary of the Ohio River, contains a naturally reproducing population on the northern boundary of their range. Currently, the lower Wabash River is monitored using two different sampling designs, the Long Term Electrofishing Program monitors community assemblages using stratified random sampling whereas the Illinois Department of Natural Resources uses a fixed sampling design. Due to the wide distribution but low abundance of Spotted Bass throughout this drainage, captures from each design were compared to assess …


Diel And Seasonal Patterns Of Channel Catfish Movement And Habitat Use In The Lower Wabash River, Hanna Gibbs Kruckman Jan 2016

Diel And Seasonal Patterns Of Channel Catfish Movement And Habitat Use In The Lower Wabash River, Hanna Gibbs Kruckman

Masters Theses

Channel catfish Ictalurus punctatus are commonly found throughout the Mississippi River basin and support commercial and recreational fisheries in many large river systems. Understanding population demographics as well as movement patterns and habitat usage can provide a more holistic approach to species management and conservation. Within a 16-km stretch of the lower Wabash River, 27 channel catfish were implanted with acoustic transmitters to monitor fine scale movement and habitat use from September 2014 through April 2016. Channel catfish were located using active tracking during two types of tracking events. Site tracking occurred only during daylight hours and diel tracking monitored …


Stopover Ecology Of Neotropical Migratory Songbirds In The Northern Yucatan Peninsula, Mexico, Lauren E. Solomon Jan 2016

Stopover Ecology Of Neotropical Migratory Songbirds In The Northern Yucatan Peninsula, Mexico, Lauren E. Solomon

Masters Theses

Chapter I. Full-service hotels, convenience stores or fire escapes? Evaluating function of stopover sites for Neotropical migrants in the northern Yucatan Peninsula

Nearctic-Neotropical migratory songbirds incur the highest mortality rates during their annual migrations. Migratory songbirds use a network of stopover sites to rest, refuel, or seek refuge during times of poor weather conditions; and the time and energy expended at these sites exceeds that of migratory flight. In order to conserve stopover sites with the highest value to Neotropical migrants, a conceptual framework was developed to classify stop over sites into three functional categories based on their function for …


Quantifying Bat Detection Survey Methods And Activity Patterns, Tara C. Hohoff Jan 2016

Quantifying Bat Detection Survey Methods And Activity Patterns, Tara C. Hohoff

Masters Theses

Bats have an astonishing diversity and provide vital ecosystem services in an array of different niches. In North America, most species of bats are insectivores and tend to be frequently overlooked for their important ecosystem role providing insect control. As bat populations have declined in recent years, farmers, land managers, conservationists, and bat enthusiasts have wondered what we can do to protect our local bat populations. As a first step, we need to develop methods that more effectively survey for rare species of bats. By performing inefficient surveys, we are doing a disservice to our funding agencies providing misinformation that …


Why Animal Welfarism Continues To Fail, Lori Marino Jan 2016

Why Animal Welfarism Continues To Fail, Lori Marino

Animal Sentience

Welfarism prioritizes human interests over the needs of nonhuman animals. Despite decades of welfare efforts other animals are mostly worse off than ever before, being subjected to increasingly invasive and harmful treatments, especially in the factory farming and biomedical research areas. A legal rights-based approach is essential in order for other animals to be protected from the varying ethical whims of our species.


Responses To Familiar And Unfamiliar Humans By Belugas (Delphinapterus Leucas), Bottlenose Dolphins (Tursiops Truncatus), & Pacific White-Sided Dolphins (Lagenorhynchus Obliquidens): A Replication And Extension, Heather M. Hill, Deirdre Yeater, Sarah Gallup, Sara Guarino, Steve Lacy, Tricia Dees, Stan A. Kuczaj Ii Jan 2016

Responses To Familiar And Unfamiliar Humans By Belugas (Delphinapterus Leucas), Bottlenose Dolphins (Tursiops Truncatus), & Pacific White-Sided Dolphins (Lagenorhynchus Obliquidens): A Replication And Extension, Heather M. Hill, Deirdre Yeater, Sarah Gallup, Sara Guarino, Steve Lacy, Tricia Dees, Stan A. Kuczaj Ii

Psychology Faculty Publications

Previous research has documented that cetaceans can discriminate between humans, but the process used to categorize humans still remains unclear. The goal of the present study was to replicate and extend previous work on the discrimination between familiar and unfamiliar humans by three species of cetaceans. The current study manipulated the familiarity and activity level of humans presented to 12 belugas (Delphinapterus leucas) housed between two facilities, five bottlenose dolphins (Tursiops truncatus), and six Pacific white-sided dolphins (Lagenorhynchus obliquidens) during free-swim conditions. Two measures of discrimination were coded from video recordings of each trial: …


Independent Origination Of Floral Zygomorphy, A Predicted Adaptive Response To Pollinators: Developmental And Genetic Mechanisms, Ghadeer Bukhari, Wenheng Zhang Jan 2016

Independent Origination Of Floral Zygomorphy, A Predicted Adaptive Response To Pollinators: Developmental And Genetic Mechanisms, Ghadeer Bukhari, Wenheng Zhang

Theses and Dissertations

Observations of floral development indicate that floral organ initiation in pentapetalous flowers more commonly results in a medially positioned abaxial petal (MAB) than in a medially positioned adaxial petal (MAD), where the medial plane is defined by the stem and the bract during early floral development. It was proposed that the dominant MAB petal initiation might impose a developmental constraint that leads to the evolution of limited patterns of floral zygomorphy in Asteridae, a family in which the floral zygomorphy develops along the medial plane and results in a central ventral (CV) petal in mature flowers. Here, I investigate whether …


From Seed To Sky: Impacts Of Explosive Compounds On Vegetation Across Spatial And Developmental Scales, Stephen M. Via Jan 2016

From Seed To Sky: Impacts Of Explosive Compounds On Vegetation Across Spatial And Developmental Scales, Stephen M. Via

Theses and Dissertations

Explosive compounds are broadly distributed across the globe as a result of nearly two centuries of munitions use in warfare and military activities. Two explosive compounds have seen disproportionate use; RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine) and TNT (2-methyl- 1,3,5-trinitrobenzene), being the most commonly found explosives in the environment. The effects of explosives on biota have been studied in great detail; however, there is a general lack of understanding with regard to broader ecological impacts of these contaminants. My dissertation objective was to follow the impacts of explosive compounds on vegetation across scales. Impacts on vegetation at the species scale alter community composition via …


Host Densities And Parasitism Rates In A Forest Defoliator Across A Rural-Urban Landscape, Abigail J. Nelson Jan 2016

Host Densities And Parasitism Rates In A Forest Defoliator Across A Rural-Urban Landscape, Abigail J. Nelson

Theses and Dissertations

Fall cankerworm (FCW) outbreaks have recently increased in frequency and intensity in the mid-Atlantic region of the United States, especially around cities of Charlotte, NC and Richmond, VA. This study evaluated the effects of two landscape features associated with urbanization, impervious surface and forest cover, on population patterns of FCW and its parasitoids across eastern Virginia. Forest cover was positively related to parasitism rates while impervious surface was positively related to FCW abundance, suggesting that FCW outbreaks may be amplified in urban areas. FCW abundance declined over the two-year period of this study, but parasitism rate increased at most sites. …


An Examination Of Plant Community Composition In Six Carolina Bays On The Coastal Plain Of South Carolina, Katherine L. Altman-Goff Jan 2016

An Examination Of Plant Community Composition In Six Carolina Bays On The Coastal Plain Of South Carolina, Katherine L. Altman-Goff

Electronic Theses and Dissertations

Historically high rates of human impact and recent Supreme Court cases, which have affected the regulation of geographically isolated wetlands in the United States, suggest that Carolina bays may be at high risk of human impacts in the future. Conservation efforts should be established based on applied ecological data and, if regulations by state and federal agencies are unable to conserve Carolina bay wetlands, it may be important to prioritize individual bays for preservation on protected lands. I examined plant community composition, diversity, richness, and rarity and soil parameters in six Carolina bays across South Carolina, using a replicated ecological …


An Invertebrate Perspective On Pain, Jennifer A. Mather Jan 2016

An Invertebrate Perspective On Pain, Jennifer A. Mather

Animal Sentience

Although Key (2016) argues that mammals feel pain and fish do not, from an invertebrate perspective, it is obvious that the pain experience is shared by animals from a number of different animal groups.


A Single Strand Of Argument With Unfounded Conclusion, Robert W. Elwood Jan 2016

A Single Strand Of Argument With Unfounded Conclusion, Robert W. Elwood

Animal Sentience

Key (2016) describes the neural system involved in human pain experience in an excellent fashion but then suggests that only that complete system can generate the experience of pain. Thus animals without all components will not feel pain. This argument has been refuted in the past by analogy to vision where it is clear that a broad range of taxa, vertebrate and invertebrate, have good visual abilities albeit with completely different central nervous systems and receptors. This known counterargument to Key’s main idea is not mentioned in the target article. Further criteria that might indicate pain and studies examining these …


What Would The Babel Fish Say?, Monica Gagliano Jan 2016

What Would The Babel Fish Say?, Monica Gagliano

Animal Sentience

Starting with its title, Key’s (2016) target article advocates the view that fish do not feel pain. The author describes the neuroanatomical, physiological and behavioural conditions involved in the experience of pain in humans and rodents and confidently applies analogical arguments as though they were established facts in support of the negative conclusion about the inability of fish to feel pain. The logical reasoning, unfortunately, becomes somewhat incoherent, with the arbitrary application of the designated human criteria for an analogical argument to one animal species (e.g., rodents) but not another (fish). Research findings are reported selectively, and questionable interpretations are …


Constructing A River, Building A Border: An Environmental History Of Irrigation, Water Law, State Formation, And The Rio Grande Rectification Project In The El Paso/Juárez Valley, Joanne Kropp Jan 2016

Constructing A River, Building A Border: An Environmental History Of Irrigation, Water Law, State Formation, And The Rio Grande Rectification Project In The El Paso/Juárez Valley, Joanne Kropp

Open Access Theses & Dissertations

The Rio Grande in the El Paso, Texas, U.S./Juárez, Chihuahua, Mexico, Valley has a long history of human use from prehistoric to modern times. Formal irrigation began in the 1600s, mainly for viticulture, changing to cotton and pecans in the 1900s. The Rio Grande was subject to bed shifting and flooding that, after 1848, affected the location of the international boundary. During the Great Depression the U.S. and Mexican governments sponsored conservation projects to provide jobs and increase agricultural production. The 1933 “Convention - Rectification of the Rio Grande” was the culmination of interstate and bi-national agreements to divide Rio …


Spatiotemporal Variability Of Plant Phenology In Drylands: A Case Study From The Northern Chihuahuan Desert, Naomi Robin Luna Jan 2016

Spatiotemporal Variability Of Plant Phenology In Drylands: A Case Study From The Northern Chihuahuan Desert, Naomi Robin Luna

Open Access Theses & Dissertations

With global change, which includes climate change, there is a sense of urgency to understand how shifts in climate will affect ecosystems. Although several studies have improved understanding of how and why some ecosystems respond, most studies have not explored simultaneous responses of different land cover types throughout a given region. Dryland ecosystems, such as the Chihuahuan Desert, appear to respond to climate variability and currently make up about 40% of global land surface area. It is expected that drylands will expand to cover 60% of land surface area on earth by mid-century making this ecosystem more critical to global …


Marine Ecoregion And Deepwater Horizon Oil Spill Affect Recruitment And Population Structure Of A Salt Marsh Snail, Steven C. Pennings, Scott Zengel, Jacob Oehrig, Merryl Alber, T. Dale Bishop, Donald R. Deis, Donna Devlin, A. Randall Hughes, John J. Hutchens, Jr., Whitney M. Kiehn, Caroline R. Mcfarlin, Clay L. Montague, Sean P. Powers, C. Edward Proffitt, Nicholle Rutherford, Camille L. Stagg, Keith Walters Jan 2016

Marine Ecoregion And Deepwater Horizon Oil Spill Affect Recruitment And Population Structure Of A Salt Marsh Snail, Steven C. Pennings, Scott Zengel, Jacob Oehrig, Merryl Alber, T. Dale Bishop, Donald R. Deis, Donna Devlin, A. Randall Hughes, John J. Hutchens, Jr., Whitney M. Kiehn, Caroline R. Mcfarlin, Clay L. Montague, Sean P. Powers, C. Edward Proffitt, Nicholle Rutherford, Camille L. Stagg, Keith Walters

University Faculty and Staff Publications

Marine species with planktonic larvae often have high spatial and temporal variation in recruitment that leads to subsequent variation in the ecology of benthic adults. Using a combination of published and unpublished data, we compared the population structure of the salt marsh snail, Littoraria irrorata, between the South Atlantic Bight and the Gulf Coast of the United States to infer geographic differences in recruitment and to test the hypothesis that the Deepwater Horizon oil spill led to widespread recruitment failure of L. irrorata in Louisiana in 2010. Size-frequency distributions in both ecoregions were bimodal, with troughs in the distributions consistent …


Comparing Process-Based And Constraint-Based Approaches For Modeling Macroecological Patterns, Xiao Xiao Jan 2016

Comparing Process-Based And Constraint-Based Approaches For Modeling Macroecological Patterns, Xiao Xiao

Biology Faculty Publications

Ecological patterns arise from the interplay of many different processes, and yet the emergence of consistent phenomena across a diverse range of ecological systems suggests that many patterns may in part be determined by statistical or numerical constraints. Differentiating the extent to which patterns in a given system are determined statistically, and where it requires explicit ecological processes, has been difficult. We tackled this challenge by directly comparing models from a constraint-based theory, the Maximum Entropy Theory of Ecology (METE) and models from a process-based theory, the size-structured neutral theory (SSNT). Models from both theories were capable of characterizing the …


Clusters Of Alpha Satellite On Human Chromosome 21 Are Dispersed Far Onto The Short Arm And Lack Ancient Layers, William Ziccardi, Chongjian Zhao, Valery Shepelev, Lev Uralsky, Ivan Alexandrov, Tatyana Andreeva, Evgeny Rogaev, Christopher Bun, Emily Miller, Catherine Putonti, Jeffrey Doering Jan 2016

Clusters Of Alpha Satellite On Human Chromosome 21 Are Dispersed Far Onto The Short Arm And Lack Ancient Layers, William Ziccardi, Chongjian Zhao, Valery Shepelev, Lev Uralsky, Ivan Alexandrov, Tatyana Andreeva, Evgeny Rogaev, Christopher Bun, Emily Miller, Catherine Putonti, Jeffrey Doering

Bioinformatics Faculty Publications

Human alpha satellite (AS) sequence domains that currently function as centromeres are typically flanked by layers of evolutionarily older AS that presumably represent the remnants of earlier primate centromeres. Studies on several human chromosomes reveal that these older AS arrays are arranged in an age gradient, with the oldest arrays farthest from the functional centromere and arrays progressively closer to the centromere being progressively younger. The organization of AS on human chromosome 21 (HC21) has not been well-characterized. We have used newly available HC21 sequence data and an HC21p YAC map to determine the size, organization, and location of the …


Predicting Suitable Habitat Decline Of Midwestern United States Amphibians And Quantifying The Consequence Of Declines Using Pond-Breeding Salamanders, Brock Struecker Jan 2016

Predicting Suitable Habitat Decline Of Midwestern United States Amphibians And Quantifying The Consequence Of Declines Using Pond-Breeding Salamanders, Brock Struecker

Master's Theses

With current declines of vertebrate taxa meeting or exceeding those of historic mass extinction events, there is a growing need to investigate the main drivers of declines. Amphibians are perhaps at greatest risk of global climate change and land-use changes than most other vertebrate classes and also have significant roles in ecosystem processes – combined, this creates a cause for concern. I designed a study that would investigate the effects of current and predicted climate change and land-use changes on amphibians using species distribution models and a field study to identify the potential consequences of amphibian species declines by investigating …