Digital Commons Network^™

Assessing The Archaeoparasitological Potential Of Quids As A Source Material For Immunodiagnostic Analyses, Johnica J. Morrow, Karl Reinhard

Karl Reinhard Publications

In the present study, quids from La Cueva de los Muertos Chiquitos (CMC) were subjected to ELISA tests for 2 protozoan parasites, Toxoplasma gondii (n=45) and Trypanosoma cruzi (n=43). The people who occupied CMC, the Loma San Gabriel, lived throughout much of present-day Durango and Zacatecas in Mexico. The known pathoecology of these people puts them into at-risk categories for the transmission of T. gondii and T. cruzi. Human antibodies created in response to these 2 parasites can be detected in modern saliva using ELISA kits intended for use with human serum. For these reasons, quids were reconstituted and …

Prehistoric Pathoecology As Represented By Parasites Of A Mummy From The Peruaçu Valley, Brazil, Karl Reinhard, Adauto Araújo

Karl Reinhard Publications

Paleopathologists have begun exploring the pathoecology of parasitic diseases in relation to diet and environment. We are summarizing the parasitological findings from a mummy in the site of Lapa do Boquete, a Brazilian cave in the state of Minas Gerais. These findings in context of the archaeology of the site provided insights into the pathoecology of disease transmission in cave and rockshelter environments. We are presenting a description of the site followed by the evidence of hookworm, intestinal fluke, and Trypanosoma infection with resulting Chagas disease in the mummy discovered in the cave. These findings are used to reconstruct the …

Coarse Root Biomass And Architecture: Applications Of Ground Penetrating Radar, John Claude Bain

Biological Sciences Theses & Dissertations

The effectiveness of ground penetrating radar (GPR) to identify and quantify coarse roots was tested in a mixed-oak forest in Southeastern Virginia using experimental pits and locally excavated root segments. GPR was found to be highly dependent on low soil moisture levels as it is unable to differentiate root structures if they possess similar moisture content as their surrounding soil. Likewise, GPR was unable to identify simulated dead roots. This does not alter the effectiveness of GPR to measure living coarse root biomass, but does present the potential for underestimation of carbon storage in coarse root structures, as a dead …

Beyond What Is Heard: A Documentary Film About Acoustic Ecology As Sustainability Activism, Jesse Rolfe

Independent Study Project (ISP) Collection

Acoustic ecology is an interdisciplinary field that studies the relationship between sounds, sound sources, and environment they exist within. From an environmental perspective, this involves a holistic consideration of ecosystems, and how the various organisms within that ecosystem, including humans, impact and interact with each other through sound. Biosphere Soundscapes, an international, interdisciplinary project directed by Australian acoustic ecologist Dr. Leah Barclay, operates to engage communities within UNESCO Biosphere Reserves through acoustic-ecological concepts, monitoring, and techniques. In November 2016, I undertook the process of creating a short documentary film entitled Beyond What is Heard, which aimed to explore how the …

A Study Of Defensive Mechanisms Employed By Two Species Of Nudibranchs Using Toxicity And Unpalatability Analyses, Sean Youn

Independent Study Project (ISP) Collection

Nudibranchs are marine invertebrates that have developed an intriguing defense mechanism, including warning coloration and the use of chemicals accumulated through their sponge diet. The goal of this study was to determine whether the strength of chemical defenses differs between dietary and accumulated secondary metabolites for two species: Glossodoris vespa and Ceratosoma brevicaudatum. First, NMR spectroscopy was used to not only identify specific compounds in the mantle (outer covering) and the viscera (gut) but also to analyze the possibility of nudibranch species transporting more toxic compounds for defensive purposes. Next, toxicity (brine shrimp) and palatability (Palaemon shrimp) assays …

The Effects Of Sub-Lethal Predation On The Reproductive Output Of Acanthaster Planci (Crown-Of-Thorns Starfish), Emily Mucha

Independent Study Project (ISP) Collection

Wide-scale declines in live coral cover have been observed throughout history. Modern day coral populations face a multitude of environmental disturbances, however one of the most devastating to the reefs in the Indo-Pacific is the crown-of-thorns starfish (Acanthaster planci), which feeds on the tissues of live corals. The rate at which these individuals feed combined with the explosion of populations in times of outbreak have been seen to exert some of the biggest pressures on coral reefs to date. Following recent episodes of crown-of-thorns starfish (COTS) outbreaks, research on the organism has become increasingly prevalent on the scientific …

Fish Diversity And Coral Health Of Tanzania's Reefs: A Comparative Study Between The Ushongo Village Reef And The Fungu Zinga Reef Over Time, Della Turque, Corinne Casper

Independent Study Project (ISP) Collection

The world’s oceans are becoming increasing acidic due to global climate change, posing a threat to marine ecosystems, including coral carbonate systems. Environmental threats are exacerbated by human development stressors as well: growing populations, dependency on marine resources, and unsustainable practices invaluable marine ecosystems at risk. Tanzania’s coral reef system extends for 3580 km2 (Muhando et al. 2008) near the Tanga region, serving over half a million people who are highly dependent on fishing and other marine resources as their livelihoods (Samoilys et. al. 2008). With Tanzania’s population rapidly growing, the unsustainable pressure on coral reefs for sustenance and livelihood …

Live And Dead Coral Cover On Three Reefs And Public Perceptions Of Degradation Around Almirante Bay, Bocas Del Toro, Phoebe Thompson

Independent Study Project (ISP) Collection

Almirante Bay is a lagoonal body of water off the western Caribbean coast of Panama. The islands within the bay are popular tourist destinations, drawing visitors from around the world to explore beaches and coral reefs. However, the reefs in Almirante Bay are continually exposed to both natural and anthropogenic stressors, such as temperature inversions, boat pollution, sedimentation from dredging, and chemical runoff from coastal banana plantations. Because the economy of the area is heavily dependent on tourism, this creates an interesting dynamic in that the main source of income (tourism) could be detrimental to a main attraction of the …

Harpy Eagle (Harpia Harpyja) Conservation: Juvenile Behavior And Diet At A Nest Near Pijibasal, Darien, Hannah Rodgers

Independent Study Project (ISP) Collection

The Harpy Eagle (Harpia harpyja), the largest and most powerful bird of prey in the Americas, is declining throughout its range in Neotropical forests. Hunting and deforestation threaten populations in the most important remaining eagle habitat in Central America, the Darien province of Panama. These eagles may have the longest postfledging juvenile dependency of any raptor, though juvenile behavior during this period is poorly studied. This study monitored an 11-month-old juvenile for 7 days at a nest near the indigenous community of Pijibasal in order to study behavior and diet. Researchers recorded the juvenile’s location and behavior, studied prey remains …

Benthic Algae And Diatom Communities In Seagrass Meadows Under Three Different Human Impact Regimes In Bocas Del Toro, Panamá, Averyl Cheng

Independent Study Project (ISP) Collection

In Bocas del Toro, Panamá, widespread tourism has been the main source of revenue and has become an increasing threat to seagrass meadows and the organisms they support. This study aimed to investigate and describe algae and diatom communities under three different regimes of anthropogenic disturbance: high, medium and low human impact. The biodiversity was analyzed by measuring the algae and diatom assemblages with Shannon-Weiner’s Biodiversity Index, Evenness Index and Sorensen’s coefficient. The data obtained from these three diversity indices were compared to the areas along an anthropogenic disturbance gradient of high, medium and low impact. A total of 12 …

The Effects Of Sub-Lethal Predation On The Reproductive Output Of Acanthaster Planci (Crown-Of-Thorns Starfish), Emily Mucha

Independent Study Project (ISP) Collection

Wide-scale declines in live coral cover have been observed throughout history. Modern day coral populations face a multitude of environmental disturbances, however one of the most devastating to the reefs in the Indo-Pacific is the crown-of-thorns starfish (Acanthaster planci), which feeds on the tissues of live corals. The rate at which these individuals feed combined with the explosion of populations in times of outbreak have been seen to exert some of the biggest pressures on coral reefs to date. Following recent episodes of crown-of-thorns starfish (COTS) outbreaks, research on the organism has become increasingly prevalent on the scientific …

Phylogeny, Systematics And Biogeography Of Short-Tailed Opossums (Didelphidae: Monodelphis), Silvia E. Pavan

Dissertations, Theses, and Capstone Projects

Short-tailed opossums (genus Monodelphis) comprise the most species-rich genus of New World marsupials, with 25 currently recognized species. Monodelphis comprise small, terrestrial species collectively widespread in South America, which makes the group potentially informative about biogeographic processes that have shaped the continental fauna. The genus exhibits striking variation in several phenotypic characters, notably pelage coloration, behavior, and reproductive strategies. This diversity is unique among Neotropical marsupials, and makes the group particularly interesting to investigate the evolution and the adaptive significance of phenotypic trait variation. Despite this potential, missing knowledge on phylogeny and basic taxonomy precludes broader studies on evolution …

Comparative Population Genomics And Speciation Of Snakes Across The North American Deserts, Edward A. Myers

Dissertations, Theses, and Capstone Projects

Understanding the process of speciation is of central interest to evolutionary biologists. Speciation can be studied using a phylogeographic approach, by identifying regions that promote lineage divergence, addressing whether speciation has occurred with gene flow, and when extended to multiple taxa, addressing if the same patterns of speciation are shared across codistributed groups with different ecologies. Here I examine the comparative phylogeographic histories and population genomics of thirteen snake taxa that are widely distributed and co-occur across the arid southwest of North America. I first quantify the degree to which these species groups have a shared history of population divergence …

Models And Methods In Cultural And Social Evolution, Elliot G. Aguilar

Dissertations, Theses, and Capstone Projects

Chapter 1 The mathematical study of genealogies has yielded important insights in population biology, such as the ability to estimate the time to the most recent common ancestor (MRCA) of a sample of genetic sequences or of a group of individuals. Here we introduce a model of cultural genealogies that is a step toward answering similar questions for cultural traits. In our model individuals can inherit from a variable, potentially large number of ancestors, rather than from a fixed, small number of ancestors (one or two) as is typical of genetic evolution. We first show that, given a sample of …

The Role Of Individual Cognitive And Behavioral Ontogeny In Organization And Evolution Of Social Systems, Andrew G. Fulmer

Dissertations, Theses, and Capstone Projects

Exploration and explanation of the relationship between individual variation in behavior and the composition and adaptive success of social groups or populations are crucial problems in the fields of behavioral ecology, ethology, and comparative psychology. These questions have been the subject of a longstanding discussion at both the proximate and ultimate levels of inquiry. Adaptive mechanisms explaining social decision making, both in terms of affiliative and competitive partner choices, are at the center of such discussions. Inclusive fitness, kin-selection, handicap or prestige, risk seeking and risk avoiding strategies, pay-to-stay/reward principles, as well as other theories have been proposed and supported …

Cognitive Dissonance Or Contrast?, Thomas R. Zentall

Animal Sentience

According to Festinger (1957), cognitive dissonance occurs when one’s behavior or belief is inconsistent with another belief and one modifies one of the beliefs in an attempt to reduce the dissonance. In nonhuman animals, we have examined a version of human cognitive dissonance theory called justification of effort, according to which the value of reward following more difficult tasks increases, presumably to justify (to oneself or to others) performing the more difficult task. We have examined the justification of effort effect in animals and found a pattern similar to the one in humans but we propose a simpler underlying …

A Novel Qtl Associated With Dwarf Bunt Resistance In Idaho 444 Winter Wheat, Jianli Chen, Mary J. Guttieri, Junli Zhang, David Hole, Edward Souza, Blair Goates

Green Canyon Environmental Research Area, Logan Utah

Dwarf bunt [Tilletia controversa J.G. Kühn [as ‘contraversa’], in Rabenhorst, Hedwigia 13: 188 (1874)] is a destructive disease of wheat (Triticum aestivum L.) that reduces grain yield and quality. A number of distinct genes conferring resistance to dwarf bunt have been used by breeding programs for nearly 100 years. However, few markers were identified that can be used in selection of dwarf bunt resistance. A recombinant inbred line (RIL) population derived from the bunt-resistant germplasm, Idaho 444 (IDO444), and the susceptible cultivar, Rio Blanco, was evaluated for phenotypic reaction to dwarf bunt inoculation in four trials in …

Investigating The Spatial Distribution And Effects Of Nearshore Topography On Acropora Cervicornis Abundance In Southeast Florida, Nicole D'Antonio, David S. Gilliam, Brian K. Walker

Marine & Environmental Sciences Faculty Articles

Dense Acropora cervicornis aggregations, or patches, have been documented within nearshore habitats in Southeast Florida (SE FL) despite close proximity to numerous anthropogenic stressors and subjection to frequent natural disturbance events. Limited information has been published concerning the distribution and abundance of A. cervicornis outside of these known dense patches. The first goal of this study was to conduct a spatially extensive and inclusive survey (9.78 km²) to determine whether A. cervicornis distribution in the nearshore habitat of SE FL was spatially uniform or clustered. The second goal was to investigate potential relationships between broad-scale seafloor topography and …

Eelgrass Distribution And Biomass In The Great Bay Estuary For 2015, Frederick T. Short

PREP Reports & Publications

See also: "Eelgrass/Macroalgae Discussion Primer for TAC Activities 2016-2017" http://scholars.unh.edu/prep/355

Eelgrass (Zostera marina L.) is an essential habitat for the Great Bay Estuary (GBE) because it is the basis of an estuarine food web that supports many of the recreationally, commercially and ecologically important species in the estuary and beyond. Eelgrass provides food for ducks, geese and swans, as well as food, nursery habitat, and shelter for juvenile fish and shellfish. Eelgrass filters estuarine waters and improves water clarity, removing both nutrients and suspended sediments from the water column; its roots and rhizomes bind and hold sediments in place, thereby …

Under Pressure: Cetaceans And Fisheries Co-Occurrence Off The Coasts Of Ghana And Côte D’Ivoire (Gulf Of Guinea), Marijke N. De Boer, James T. Saulino, Koen Van Waerebeek, Geert Aarts

Anthropogenics and Population Decline Collection

Within the Gulf of Guinea high levels of fisheries-related cetacean mortality (bycatch and direct-capture) has been documented. For locally rare species such removals could potentially lead to significant population level effects. However, information on the cetacean abundance and distribution is scarce. Similarly, it remains largely unreported where fishing fleets operate offshore. A cetacean survey took place during geophysical surveys (2013–2014) along the coasts of Ghana and Côte d’Ivoire. This provided a unique opportunity to study both offshore cetacean and fishing communities. Due to large group-sizes, melon-headed whales were the most abundant (0.34 animals km−1) followed by Fraser’s dolphins and short-finned …

A Revision Of The Genus Rhinolaemus Steel (Coleoptera: Laemophloeidae), Michael C. Thomas

Insecta Mundi

The genus Rhinolaemus Steel is revised. A new island and a new country record are presented for the type species, R. maculatus Steel. A new species, R. niueensis Thomas, new species, is described from Niue, and Rhinolaemus tuberculatus (Grouvelle), new combination, is transferred from Laemophloeus (sens. lat.). The members of the genus are illustrated and a key to their identification is presented.

A New Species Of Neostenoptera (Diptera: Cecidomyiidae: Winnertziinae) From Eastern North America, John D. Plakidas, Michael L. Ferro

Insecta Mundi

A new species of paedogenetic gall midge, Neostenoptera appalachiensis sp. nov., (Diptera: Cecidomyiidae: Winnertziinae: Heteropezini) from the eastern United States is described and illustrated, and pertinent collection and biological data are also provided. It is compared to its congeners, N. kiefferi (Meunier), a subfossil described from African copal, and N. congoensis Gagné, from the Congo. This rare, exciting discovery is the first record of the genus Neostenoptera in the New World.

While conducting research in Great Smoky Mountains National Park (GSMNP) (North Carolina and Tennessee, USA) (Ferro et al. 2012), MLF collected numerous unidentifi able fl ies as bycatch from …

Evolutionary Continuity Of Personhood, Anne Benvenuti

Animal Sentience

Rowlands applies the two organizing ideas of the Lockean concept of personhood — mental life and unity — to animals as potential persons. Especially valuable in this context is his descriptive phenomenology of pre-reflective self-awareness as a fundamental form of mental life that necessarily entails unity. Rowland describes certain fundamentals of mental experience that exist across species boundaries, challenging assumptions of early modern philosophers regarding the definition of human personhood and affirming the principle of evolutionary continuity. This opens the door to a broader and deeper set of questions, related to whether we should continue to attempt to apply to …

The Functional Extinction Of Andean Megafauna, Angela Rozas-Dávila, Bryan G. Valencia, Mark B. Bush

Biomedical Engineering and Sciences Faculty Publications

Controversy exists over the cause and timing of the extinction of the Pleistocene megafauna. In the tropical Andes, deglaciation and associated rapid climate change began ∼8,000 years before human arrival, providing an opportunity to separate the effects of climate change from human hunting on megafaunal extinction. We present a paleoecological record spanning the last 25,000 years from Lake Pacucha, Peru (3,100 m elevation). Fossil pollen, charcoal, diatoms, and the dung fungus Sporormiella, chronicle a two-stage megaherbivore population collapse. Sporormiella abundance, the proxy for megafaunal presence, fell sharply at ∼21,000 years ago, but rebounded prior to a permanent decline between ∼16,800 …

The Utilization Of Aquatic Bushmeat From Small Cetaceans And Manatees In South America And West Africa, A. Mel Cosentino, Sue Fisher

Anthropogenics and Population Decline Collection

Aquatic bushmeat can be defined as the products derived from wild aquatic megafauna (e.g., marine mammals) that are used for human consumption and non-food purposes, including traditional medicine. It is obtained through illegal or unregulated hunts as well as from stranded (dead or alive) and bycaught animals. In most South American and West African countries aquatic mammals are or have been taken for bushmeat, including 33 small cetaceans and all three manatee species. Of these, two cetacean species are listed in the IUCN red list as “near threatened,” and one as “vulnerable,” as are all manatee species. Additionally, 22 cetacean …

Provisional Revision Of The Genus Epimelitta Bates, 1870 And Associated Genera, With A Brief Synopsis Of The Genus Acorethra Bates, 1873 (Coleoptera, Cerambycidae), Robin O.S. Clarke

Insecta Mundi

Abstract. Epimelitta Bates, 1870 (Coleoptera, Cerambycidae) is redescribed with two species: Epimelitta scoparia (Klug, 1825) and Epimelitta rufiventris Bates, 1870; Epimelitta meliponica Bates, 1870 syn. nov. and Epimelitta acutipennis Fisher, 1947 syn. nov. are considered junior synonyms of E. scoparia. Exepimelitta gen. nov. is described with five species: Exepimelitta mimica (Bates, 1873), Ex. nigerrima (Bates, 1892), Ex. consobrina (Melzer, 1931) (= Epimelitta nigerrima var. flavipubescens Fisher, 1947, syn. nov.), Ex. lestradei (Peñaherrera-Leiva and Tavakilian, 2003) and Ex. windsori sp. nov. Charisia Champion, 1892 is revalidated and redescribed with six species: Charisia euphrosyne (Newman, 1840), C. mneme (Newman, 1841), …

Sybra Alternans (Wiedemann) (Lamiinae: Apomecynini): An Asian Cerambycid Established On Easter Island, Chile, José Mondaca, Francisco Ramírez, Sergio Rothmann

Insecta Mundi

Seven specimens of Sybra alternans (Wiedemann) (Cerambycidae: Lamiinae: Apomecynini) were captured with a UV light trap and by beating branches of trees in the urban area of Easter Island (Chile) during 2011–2016, representing the fi rst record of the species in this Chilean insular territory, but not continental Chile. Sybra alternans is native to Southeast Asia and has been introduced accidentally to Hawaii and Florida in the United States of America. Data are presented from the literature on this species’ distribution, host plants, and biological information.

Resumen. Siete ejemplares de Sybra alternans (Wiedemann) (Cerambycidae: Lamiinae: Apomecynini) fueron capturados con una …

Taxonomic Supplement (2001 To 2015) To The Catalogue Of New Zealand Carabidae (Insecta: Coleoptera), André Larochelle, Marie-Claude Larivière

Insecta Mundi

A supplement to the “Carabidae (Insecta: Coleoptera): catalogue” published by Larochelle and Larivière (2001; Fauna of New Zealand 43), is provided. A total of 99 genera and 547 species and subspecies belonging to 21 tribes and 8 subfamilies of Carabidae (including Cicindelini and Rhysodini), is recorded for New Zealand. Endemism is high, with 93% of the species and subspecies as well as 62% of the genera recorded from this country only. Changes to the 2001 catalogue are documented. The synonymy and type locality of taxa described between 2001 and 2015 are also provided.

Darwin’S Empirical Evidence, Maxine Sheets-Johnstone

Animal Sentience

Darwin’s extensive writings may seem antiquated to current thinkers with their predilections for cognitive science, neuroscience, and analytic branches of philosophy. He showed that morphologies are not simply taxonomic distinctions that allow classification into species. They describe living animals, hence morphologies-in-motion: animate forms of life engaged in synergies of meaningful movement, all of which are testimony to animal sentience.

Animal Personhood Is An Evolutionary Issue, James E. King

Animal Sentience

The Rowlands target article makes a case, based on John Locke’s metaphysical argument, that personhood can be applied to many species beyond a few nonhuman primates. The problem with this argument is that personhood has an open-ended list of defining attributes and can, at best only be partially applied to nonhuman species. Therefore, a dichotomous distinction cannot be made between qualifying and non-qualifying species. Instead, between-species comparisons must be based on observational and experimental procedures to demonstrate the extent to which human mental attributes are shared with other species. This would allow a more informed view about the appropriateness of …