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Density-Dependent Leslie Matrix Modeling For Logistic Populations With Steady-State Distribution Control, Andrew M. Davis, Bruce Kessler Oct 2016

Density-Dependent Leslie Matrix Modeling For Logistic Populations With Steady-State Distribution Control, Andrew M. Davis, Bruce Kessler

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


Using Citizen Science And Remote Sensing Data To Model Hummingbird Migration, Sarah R. Supp, Laura J. Graham, Frank A. La Sorte, Tina A. Cormier, Gil Bohrer, Donald Powers, Susan Wethington, Kevin Guay, Patrick Jantz, Scott Goetz, Catherine H. Graham Oct 2016

Using Citizen Science And Remote Sensing Data To Model Hummingbird Migration, Sarah R. Supp, Laura J. Graham, Frank A. La Sorte, Tina A. Cormier, Gil Bohrer, Donald Powers, Susan Wethington, Kevin Guay, Patrick Jantz, Scott Goetz, Catherine H. Graham

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


Discrete Models Of Newt Population Declines Due To Severe Drought And Invasive Crayfish, Courtney L. Davis, Timothy A. Lucas Oct 2016

Discrete Models Of Newt Population Declines Due To Severe Drought And Invasive Crayfish, Courtney L. Davis, Timothy A. Lucas

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


Social Structure Algorithms For A Yellow-Bellied Marmot Population Model, Erin N. Bodine, Anne E. Yust Oct 2016

Social Structure Algorithms For A Yellow-Bellied Marmot Population Model, Erin N. Bodine, Anne E. Yust

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


Can Culling Barred Owls Save A Declining Northern Spotted Owl Population?, Alex Capaldi Oct 2016

Can Culling Barred Owls Save A Declining Northern Spotted Owl Population?, Alex Capaldi

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


Mathematical Model Of Swimmer's Itch With Praziquantel Treatment, Kelly R. Buch Oct 2016

Mathematical Model Of Swimmer's Itch With Praziquantel Treatment, Kelly R. Buch

Annual Symposium on Biomathematics and Ecology Education and Research

No abstract provided.


Reproductive Schedule Of The Silver Shiner (Notropis Photogenis) In The Flint River Of Alabama, Kelly Hodgskins, Stephanie Greenleaf, Jonathan Hillman, Bruce Stallsmith Oct 2016

Reproductive Schedule Of The Silver Shiner (Notropis Photogenis) In The Flint River Of Alabama, Kelly Hodgskins, Stephanie Greenleaf, Jonathan Hillman, Bruce Stallsmith

Southeastern Fishes Council Proceedings

Many river-dwelling species of fish are dependent upon and stimulated by fluctuations in river flow for successful reproduction. This is especially true of pelagophils, a reproductive guild whose eggs and larvae require free drifting on river currents for several days. Notropis photogenis (Silver Shiner) is a rheophilic species with a broad distribution from Ontario to the southeastern United States including northern tributaries to the Tennessee River in Alabama. Little is known of its reproductive biology. The purpose of this study was to describe aspects of reproductive biology such as timing and pattern of ovarian development and oocyte maturation of N. …


Scorpions Of The Horn Of Africa (Arachnida: Scorpiones). Part Ix. Lanzatus, Orthochirus, And Somalicharmus (Buthidae), With Description Of Lanzatus Somalilandus Sp. N. And Orthochirus Afar Sp. N., František Kovařík, Graeme Lowe, František Šťáhlavský Oct 2016

Scorpions Of The Horn Of Africa (Arachnida: Scorpiones). Part Ix. Lanzatus, Orthochirus, And Somalicharmus (Buthidae), With Description Of Lanzatus Somalilandus Sp. N. And Orthochirus Afar Sp. N., František Kovařík, Graeme Lowe, František Šťáhlavský

Euscorpius

The rare Horn of Africa buthid genera Lanzatus Kovařík, 2001, Orthochirus Karsch, 1891, and Somalicharmus Kovařík, 1998 were newly collected. Lanzatus is reported for the first time from Somaliland, and Orthochirus for the first time from Ethiopia. We describe two new species, Lanzatus somalilandus sp. n. from Somaliland, and Orthochirus afar sp. n. from Ethiopia, both discovered during scorpiological expeditions in 2011–2016. Information is provided for all Horn of Africa species belonging to these three genera: their taxonomy, distribution, and ecology, fully complemented with color photos of live and preserved specimens, as well as their habitat. …


Consciousness And The Unity Of Mind, Mark Rowlands Oct 2016

Consciousness And The Unity Of Mind, Mark Rowlands

Animal Sentience

Several types of objection have been raised against the arguments I presented in my target article, “Are animals persons?” Among the objections are the following: (1) the claim that animals are persons is of little significance, (2) my use of the Lockean conception of the person is questionable, (3) whether a creature qualifies as a person is a matter of social construction rather than objective fact, (4) reflective consciousness is more important than I realize, (5) my reliance on implicit self-awareness in the account of personhood is ill-advised, (6) my account entails that too many creatures qualify as persons, and …


The North American Sea Ducks: Their Biology And Behavior, Paul A. Johnsgard Oct 2016

The North American Sea Ducks: Their Biology And Behavior, Paul A. Johnsgard

Zea E-Books Collection

The 21 species of sea ducks are one of the larger subgroups (Tribe Mergini) of the waterfowl family Anatidae, and the 16 species (one historically extinct) that are native to North America represent the largest number to be found on any continent, and also the largest number of endemic sea duck species native to any continent.

Although generally not important as game birds, the sea ducks include some economically important birds such as the eiders, the basis for the Arctic eiderdown industry and a historically important food source for some Native American cultures. They also include what is probably the …


Great Bay Estuary Macroalgae Monitoring Program For 2016 Quality Assurance Project Plan, Kalle Matso Oct 2016

Great Bay Estuary Macroalgae Monitoring Program For 2016 Quality Assurance Project Plan, Kalle Matso

Quality Assurance Project Plans

No abstract provided.


Insects: Still Looking Like Zombies, Christopher S. Hill Oct 2016

Insects: Still Looking Like Zombies, Christopher S. Hill

Animal Sentience

In arguing that insect brains are capable of sentience, Klein & Barron rely heavily on Bjorn Merker’s claim that activity in the human mid-brain is sufficient for conscious experience. I criticize Merker’s claim by pointing out that the behaviors supported by midbrain activity are much more primitive than the ones that appear to depend on consciousness. I raise a similar objection to Klein & Barron’s contention that insect behaviors are similar to behaviors that manifest consciousness in human beings. The similarity is weak. I also respond to the related view that integrative activity in mid-brain structures is sufficient to explain …


Mitochondrial Dna Sequence And Lack Of Response To Anoxia In The Annual Killifish Austrofundulus Limnaeus, Josiah Tad Wagner, Florisela Herrejon Chavez, Jason E. Podrabsky Oct 2016

Mitochondrial Dna Sequence And Lack Of Response To Anoxia In The Annual Killifish Austrofundulus Limnaeus, Josiah Tad Wagner, Florisela Herrejon Chavez, Jason E. Podrabsky

Center for Life in Extreme Environments Publications

The annual killifish Austrofundulus limnaeus inhabits ephemeral ponds in regions of Venezuela, South America. Permanent populations of A. limnaeus are maintained by production of stress-tolerant embryos that are able to persist in the desiccated sediment. Previous work has demonstrated that A. limnaeus have a remarkable ability to tolerate extended periods of anoxia and desiccating conditions. After considering temperature, A. limnaeus embryos have the highest known tolerance to anoxia when compared to any other vertebrate yet studied. Oxygen is completely essential for the process of oxidative phosphorylation by mitochondria, the intracellular organelle responsible for the majority of adenosine triphosphate production. Thus, …


Lessons From The Far End: Caterpillar Frass-Induced Defenses In Maize, Rice, Cabbage, And Tomato, Swayamjit Ray, Saumik Basu, Loren J. Rivera-Vega, Flor E. Acevedo, Joe Louis, Gary W. Felton, Dawn S. Luthe Oct 2016

Lessons From The Far End: Caterpillar Frass-Induced Defenses In Maize, Rice, Cabbage, And Tomato, Swayamjit Ray, Saumik Basu, Loren J. Rivera-Vega, Flor E. Acevedo, Joe Louis, Gary W. Felton, Dawn S. Luthe

Department of Entomology: Faculty Publications

Plant defenses to insect herbivores have been studied in response to several insect behaviors on plants such as feeding, crawling, and oviposition. However, we have only scratched the surface about how insect feces induce plant defenses. In this study, we measured frass-induced plant defenses in maize, rice, cabbage, and tomato by chewing herbivores such as European corn borer (ECB), fall armyworm (FAW), cabbage looper (CL), and tomato fruit worm (TFW). We observed that caterpillar frass induced plant defenses are specific to each host-herbivore system, and they may induce herbivore or pathogen defense responses in the host plant depending on the …


Canine Filamentous Dermatitis Associated With Borrelia Infection, Marianne J. Middelveen, Gheorghe M. Rotaru, Jody L. Mcmurray, Katherine R. Filush, Eva Sapi, Jennie Burke, Agustin Franco, Lorenzo Malquori, Melissa C. Mcelroy, Raphael B. Stricker Oct 2016

Canine Filamentous Dermatitis Associated With Borrelia Infection, Marianne J. Middelveen, Gheorghe M. Rotaru, Jody L. Mcmurray, Katherine R. Filush, Eva Sapi, Jennie Burke, Agustin Franco, Lorenzo Malquori, Melissa C. Mcelroy, Raphael B. Stricker

Biology and Environmental Science Faculty Publications

Background: Although canine clinical manifestations of Lyme disease vary widely, cutaneous manifestations are not well documented in dogs. In contrast, a variety of cutaneous manifestations are reported in human Lyme disease caused by the spirochete Borrelia burgdorferi. A recently recognized dermopathy associated with tickborne illness known as Morgellons disease is characterized by brightly-colored filamentous inclusions and projections detected in ulcerative lesions and under unbroken skin. Recent studies have demonstrated that the dermal filaments are collagen and keratin biofibers produced by epithelial cells in response to spirochetal infection. We now describe a similar filamentous dermatitis in canine Lyme disease. Methods and …


Soil Moisture On Soledad Ridge In Santa Rosa Island, Channel Islands National Park, Carrie Fong, Kathryn Mceachern, Ken Niessen Oct 2016

Soil Moisture On Soledad Ridge In Santa Rosa Island, Channel Islands National Park, Carrie Fong, Kathryn Mceachern, Ken Niessen

STAR Program Research Presentations

Santa Rosa Island is one of the Channel Islands off the coast of southern California. Before the island was heavily grazed, Santa Rosa Island is thought to have had large stands of island oak trees, Quercus tomentella, that provided a critical source of water for the ecosystem by creating a “cloud forest”. Wind-borne fog collects on the leaves, branches, and twigs of the island oaks and other native shrubs. Once the water condenses it drips, falls, and soaks into the soil. Introducing cattle and especially sheep to the island has damaged the ecosystem and nearly decimated Santa Rosa Island …


Studying The Effects Of Serpentine Soil On Adapted And Non-Adapted Species Using Arduino Technology, Kiana Saniee, Edward Himelblau, Brian Paavo Oct 2016

Studying The Effects Of Serpentine Soil On Adapted And Non-Adapted Species Using Arduino Technology, Kiana Saniee, Edward Himelblau, Brian Paavo

STAR Program Research Presentations

Abstract: Serpentine soils are formed from ultramafic rocks and are represent an extreme environment for plants. Serpentine soils are unique in that they carry high concentrations of heavy metals, are nutrient deficient, particularly in calcium, and have poor water retention capabilities. Although these soils constitute harsh conditions for plant growth, there are a number of species that are adapted and even endemic to serpentine soil. Water retention by commercial potting mix was compared with serpentine soil. Also, serpentine adapted and non-adapted species were grown in both soil treatments and physiological data were collected. We used the Arduino electronic platform to …


To Fish Or Not To Fish? What Effect Do California’S Marine Protected Areas Have On Up-And-Coming Kellet’S Whelk Fishery?, Jennifer Greene Oct 2016

To Fish Or Not To Fish? What Effect Do California’S Marine Protected Areas Have On Up-And-Coming Kellet’S Whelk Fishery?, Jennifer Greene

STAR Program Research Presentations

Kellet’s whelk, Kelletia kelletii, were observed at sample sites throughout their range from Baja California, Mexico, to Monterey, CA to determine patterns of population density. Sample sites in each region were either located within California marine protected areas where take of the Kellet’s whelk in prohibited, or in non-protected areas where the whelks can be fished both commercially and recreationally. Kellet’s whelk population density was compared between all MPA and non-MPA sample sites. These mean densities were also found for sites in Santa Barbara and San Diego near active fishing ports and compared to data from the same sites collected …


Eelgrass/Macroalgae Discussion Primer For Tac Activities 2016-2017, Piscataqua Region Estuaries Partnership Oct 2016

Eelgrass/Macroalgae Discussion Primer For Tac Activities 2016-2017, Piscataqua Region Estuaries Partnership

PREP Reports & Publications

See also: "Eelgrass Distribution and Biomass in the Great Bay Estuary for 2015" http://scholars.unh.edu/prep/354

"Eelgrass Distribution in the Great Bay Estuary for 2014" http://scholars.unh.edu/prep/352/

The issue of eelgrass and macroalgae in the Great Bay Estuary (GBE) is extremely important and complex. The purpose of this document is to clarify issues and questions to make for a more productive and informed discussion.


Reef Fish And Coral Assemblages On Hospital Point And Near Bastimentos Island, Panama, Elaine Shen Oct 2016

Reef Fish And Coral Assemblages On Hospital Point And Near Bastimentos Island, Panama, Elaine Shen

Independent Study Project (ISP) Collection

Because worldwide declines coral reef health are of major concern, studying coral reefs through the lens of conservation efforts at local scales is essential for determining and monitoring effective policy measures. In the Bocas del Toro Archipelago, there are conflicts of interest between exploitative rapid tourism development, overfishing practices, and national efforts to conserve the local marine biodiversity. Coral and reef fish species abundance richness, diversity, evenness, and similarity were measured to see how coral and reef fish assemblages changed between protected and unprotected areas. A total of 329 fish and 322.5 square meters of benthos were analyzed using underwater …


Uncommon/Rare Avian Species Decline And Extirpation In Nested Assemblages Of Northeastern Illinois Wetlands, James M. Mcaley Oct 2016

Uncommon/Rare Avian Species Decline And Extirpation In Nested Assemblages Of Northeastern Illinois Wetlands, James M. Mcaley

All Capstone Projects

Baisa found that avian assemblages are highly nested in palustrine emergent wetlands in northeastern Illinois. He measured nestedness by constructing a binary matrix of species presence and absence across sites. Nestedness was also quantified using the Mann-Whitney U-test in his study.

The goal of this project was to sample the wetlands as Baisa had done in his study. By doing so, we will have 2 sampling events, approximately 10 years apart. Nestedness of the wetland communities will be checked, and data compared to that of Baisa. Emergent wetlands in northeastern Illinois were found by Baisa to contain highly nested avian …


A Francisella-Like Endosymbiont In The Gulf Coast Tick Evolved From A Mammalian Pathogen, Jonathan G. Gerhart, Abraham S. Moses, Rahul Raghavan Oct 2016

A Francisella-Like Endosymbiont In The Gulf Coast Tick Evolved From A Mammalian Pathogen, Jonathan G. Gerhart, Abraham S. Moses, Rahul Raghavan

Biology Faculty Publications and Presentations

Ticks (order Ixodida) vector pathogenic bacteria that cause diseases in humans and other mammals. They also contain bacteria that are closely related to pathogens but function as endosymbionts that provide nutrients that are missing from mammalian blood—their sole food source. For instance, mammalian pathogens such as Coxiella burnetii and Francisella tularensis, as well as Coxiella-like and Francisella-like endosymbionts (CLEs and FLEs, respectively) occur in ticks worldwide. However, it is not clear whether the pathogens evolved from symbionts or symbionts from pathogens. Recent studies have indicated that C. burnetii likely originated from a tick-associated ancestor, but the origins …


The Effect Of Survey Date On Assessing Calling Activity Of Hylidae, M. Kyle Brown, Amelia L. Russell, Adrian K.O. Hayes, Elliot P. Gibbs, Melissa A. Pilgrim Oct 2016

The Effect Of Survey Date On Assessing Calling Activity Of Hylidae, M. Kyle Brown, Amelia L. Russell, Adrian K.O. Hayes, Elliot P. Gibbs, Melissa A. Pilgrim

Journal of the South Carolina Academy of Science

No abstract provided.


Climate Change Impacts On Freshwater Wetland Hydrology And Vegetation Cover Cycling Along A Regional Aridity Gradient, Philip A. Fay, Glenn R. Guntenspergen, Jennifer H. Olker, W. Carter Johnson Oct 2016

Climate Change Impacts On Freshwater Wetland Hydrology And Vegetation Cover Cycling Along A Regional Aridity Gradient, Philip A. Fay, Glenn R. Guntenspergen, Jennifer H. Olker, W. Carter Johnson

Natural Resource Management Faculty Publications

Global mean temperature may increase up to 6°C by the end of this century and together with precipitation change may steepen regional aridity gradients. The hydrology, productivity, and ecosystem services from freshwater wetlands depend on their future water balance. We simulated the hydrology and vegetation dynamics of wetland complexes in the North American Prairie Pothole Region with the WETLANDSCAPE model. Simulations for 63 precipitation × temperature combinations spanning 6°C warming and −20% to +20% annual precipitation change at 19 locations along a mid-continental aridity gradient showed that aridity explained up to 99% of the variation in wetland stage and hydroperiod …


Cedar Waxwings, Michael L. Avery, Anthony G. Duffiney Oct 2016

Cedar Waxwings, Michael L. Avery, Anthony G. Duffiney

Wildlife Damage Management Technical Series

Prevention and control of cedar waxwing (Bombycilla cedrorum) damage to small fruits such as blueberry, cherry, and strawberry is vexing to growers in many parts of the United States. Cedar waxwings (Figure 1) travel in flocks and descend in large numbers on berry crops, especially during winter and migration. In short feeding bouts, waxwings eat, peck, or knock substantial amounts of fruit from the plants. These frugivores are difficult to discourage once they become established at a given location. Harassment early and often using pyrotechnics or other sudden noisemakers can help prevent flocks from being established. The most effective preventative …


Foraging Behavior Of Tetramorium Caespitum In An Urban Environment: The Effect Of Food Quality On Foraging, Nicole A. Crofton, Sabrina R. D'Mello, Nene S. Sy Oct 2016

Foraging Behavior Of Tetramorium Caespitum In An Urban Environment: The Effect Of Food Quality On Foraging, Nicole A. Crofton, Sabrina R. D'Mello, Nene S. Sy

Student Publications

Animals' foraging strategies are directly related to their fitness. Proposed models of optimal foraging assume that animals strategize in terms of maximizing benefits over the cost of acquiring resources. Ants are social insects that are comparable in biomass to humans inhabiting the plant. As such, it is crucial to understand the foraging strategies of such an influential member of the ecosystem. With the ever-increasing rate of urbanization and human encroachment, it is even more important to consider the foraging patterns of species inhabiting urban areas. In this study we investigate optimal foraging strategies in the pavement ant, Tetramorium caespitum. Specifically, …


Shrub Consumption And Immediate Changes In Shrub Community And Spatial Patterns By Reintroduced Fire In Yosemite National Park, California, Usa; Supplemental Information, J. A. Lutz, T. J. Furniss, S. J. Germain, K. M. L. Becker, E. M. Blomdahl, S. A. Jeronimo, C. A. Cansler, J. A. Freund, M. E. Swanson, A. J. Larson Oct 2016

Shrub Consumption And Immediate Changes In Shrub Community And Spatial Patterns By Reintroduced Fire In Yosemite National Park, California, Usa; Supplemental Information, J. A. Lutz, T. J. Furniss, S. J. Germain, K. M. L. Becker, E. M. Blomdahl, S. A. Jeronimo, C. A. Cansler, J. A. Freund, M. E. Swanson, A. J. Larson

Browse all Datasets

Fire behavior in the Yosemite Forest Dynamics Plot during the Rim Fire as captured by the USFS Fire Behavior Assessment Team and reported in Ewell, C., D.F. Smith, M. Hilden, S. Greene, D. Coultrap, K. Robinson, N. Vaillant, A. Reiner, T. Norman. 2015. 2013 Rim Fire Stanislaus National Forest and Yosemite National Park Fire Behavior Assessment Team Summary Report. Each video was started based on a thermocouple trigger when the fire reached it.


Evolutionary Interpretations Of Mycobacteriophage Biodiversity And Host-Range Through The Analysis Of Codon Usage Bias, Laura A. Esposito, Swati Gupta, Fraida Streiter, Ashley Prasad, John J. Dennehy Oct 2016

Evolutionary Interpretations Of Mycobacteriophage Biodiversity And Host-Range Through The Analysis Of Codon Usage Bias, Laura A. Esposito, Swati Gupta, Fraida Streiter, Ashley Prasad, John J. Dennehy

Publications and Research

In an genomics course sponsored by the Howard Hughes Medical Institute (HHMI), undergraduate students have isolated and sequenced the genomes of more than 1,150 mycobacteriophages, creating the largest database of sequenced bacteriophages able to infect a single host, Mycobacterium smegmatis, a soil bacterium. Genomic analysis indicates that these mycobacteriophages can be grouped into 26 clusters based on genetic similarity. These clusters span a continuum of genetic diversity, with extensive genomic mosaicism among phages in different clusters. However, little is known regarding the primary hosts of these mycobacteriophages in their natural habitats, nor of their broader host ranges. As such, it …


Rabbit Control: Bait Stations, Department Of Primary Industries And Regional Development, Western Australia Oct 2016

Rabbit Control: Bait Stations, Department Of Primary Industries And Regional Development, Western Australia

Biosecurity factsheets

This factsheet provides information on using bait stations for rabbit control.

Biological control agents such as the myxoma virus (myxomatosis), and rabbit haemorraghic disease virus (RHDV) or rabbit calicivirus disease, will not provide ‘magic bullets’ for reducing the impact of rabbits on agricultural production and the environment. Biological agents are more effective when they form part of an integrated approach to rabbit control. An integrated approach should use all available control options, including biological control, the use of vertebrate pesticides, shooting, and trapping programs. Control programs are most effective when they include the greatest number of properties possible (that is, …


Evaluating Impacts Using A Baci Design, Ratios, And A Bayesian Approach With A Focus On Restoration, Mary M. Conner, W. Carl Saunders, Nicolaas Bouwes, Chris Jordan Oct 2016

Evaluating Impacts Using A Baci Design, Ratios, And A Bayesian Approach With A Focus On Restoration, Mary M. Conner, W. Carl Saunders, Nicolaas Bouwes, Chris Jordan

Wildland Resources Faculty Publications

Before-after-control-impact (BACI) designs are an effective method to evaluate natural and human-induced perturbations on ecological variables when treatment sites cannot be randomly chosen. While effect sizes of interest can be tested with frequentist methods, using Bayesian Markov chain Monte Carlo (MCMC) sampling methods, probabilities of effect sizes, such as a ≥20 % increase in density after restoration, can be directly estimated. Although BACI and Bayesian methods are used widely for assessing natural and human-induced impacts for field experiments, the application of hierarchal Bayesian modeling with MCMC sampling to BACI designs is less common. Here, we combine these approaches and extend …