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Articles 13561 - 13590 of 15532

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Trace Element Determination In Brassica Oleraceae Var. Acephale By Differential Pulse Polarography, Güler Somer, Arzu Nakişci Ünlü, Şükrü Kalayci, Ferat Şahi̇n Jan 2006

Trace Element Determination In Brassica Oleraceae Var. Acephale By Differential Pulse Polarography, Güler Somer, Arzu Nakişci Ünlü, Şükrü Kalayci, Ferat Şahi̇n

Turkish Journal of Chemistry

A fast and simple differential pulse polarographic (DPP) method for the determination of trace elements in a certain form of cabbage is described. This vegetable is commonly used as food in Turkey, especially in the Black Sea region. Using DPP polarograms of wet digested cabbage samples (leaf) in pH 2 and 4 acetate buffer Mo, Cr, Se, Pb, As and Zn quantities were determined. The best separation and determination condition for Cu and Fe was in EDTA at pH 6.5, and for Ni and Zn it was ammonia buffer at pH 9.8. The trace element quantities in digested leaf samples …

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Short And Effective Synthesis Of A Thiophene Analogue Of (\Pm)-4-Ipomeanol And Its Biological Evaluation, Jurgen Krauss, Doris Unterreitmeier, Franz Bracher Jan 2006

Short And Effective Synthesis Of A Thiophene Analogue Of (\Pm)-4-Ipomeanol And Its Biological Evaluation, Jurgen Krauss, Doris Unterreitmeier, Franz Bracher

Turkish Journal of Chemistry

The thiophene analogue of (\pm)-4-ipomeanol (1) was prepared in 2 steps starting from 3-iodothiophene and pent-4-yn-2-ol. The key steps were a Sonogashira reaction, followed by HgO catalysed hydratisation of the triple bond. The resulting thiophene was tested in the MTT assay for its cytotoxic activity against HL 60 cells.

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Spectroscopic Characterisation And Biological Applications Of Organotin(Iv) Derivatives Of 3-(N-Naphthylaminocarbonyl)-2-Propenoic Acid, Sajjad Ahmad, Moazzam H. Bhatti, Saqib Ali, Fiaz Ahmed Jan 2006

Spectroscopic Characterisation And Biological Applications Of Organotin(Iv) Derivatives Of 3-(N-Naphthylaminocarbonyl)-2-Propenoic Acid, Sajjad Ahmad, Moazzam H. Bhatti, Saqib Ali, Fiaz Ahmed

Turkish Journal of Chemistry

In an effort to develop new organotin materials for investigation and biocidal evaluation, a series of compounds with the general formula R_{4 - n}SnL_n (where R = CH_3, n-C_4H_9, C_6H_5, C_6H_5CH_2 and L = 3-(N-naphthylaminocarbonyl)-2-propenoic acid) were synthesised, and characterised by elemental analysis, IR, multinuclear (^1H, ^{13}C and ^{119}Sn) NMR, ^{119m}Sn Mössbauer spectroscopy and mass spectrometry. The biological activity of these compounds against various bacteria and fungi was investigated. All of the compounds were active against the fungi tested with a few exceptions. These compounds also showed significant antibacterial activity. LD_{50} data show that the investigated compounds have significant toxicity.

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Synthesis And Biological Activities Of N-Alkyl Derivatives Of O-, M-, And P-Nitro (E)-4-Azachalcones And Stereoselective Photochemistry In Solution, With Theoretical Calculations, Nuretti̇n Yayli, Osman Üçüncü, Ahmet Yaşar, Murat Küçük, Nuran Yayli, Emi̇ne Akyüz, Şengül Alpay Karaoğlu Jan 2006

Synthesis And Biological Activities Of N-Alkyl Derivatives Of O-, M-, And P-Nitro (E)-4-Azachalcones And Stereoselective Photochemistry In Solution, With Theoretical Calculations, Nuretti̇n Yayli, Osman Üçüncü, Ahmet Yaşar, Murat Küçük, Nuran Yayli, Emi̇ne Akyüz, Şengül Alpay Karaoğlu

Turkish Journal of Chemistry

The N-alkyl derivatisation and photochemical dimerisation of 3 o-, m-, and p-nitro substituted 4-azachalcones (1-3) yielded 3 new o-, m-, and p-nitro substituted (E)-N-decyl-4-azachalconium bromides, (2E)-1-(2-nitrophenyl)-3-(N-decyl-4-pyridinium bromide)-2-propen-1-one (4), (2E)-1-(3-nitrophenyl)-3-(N-decyl-4-pyridinium bromide)-2-propen- 1-one (5), and (2E)-1-(4-nitrophenyl)-3-(N-decyl-4-pyridinium bromide)- 2-propen-1-one (6), and 3 new dimers in solution, (1\beta, 2\alpha)-di- (3-nitrobenzoyl)-(3\beta, 4\alpha)-di-(4-pyridinyl) cyclobutane (7), (1\beta, 2\alpha)-di-(4-nitrobenzoyl)-(3\beta,4\alpha)-di-(4-pyridinyl) cyclobutane (8a), and (1\beta, 2\beta)-di-(4-nitrobenzoyl)-(3\beta, 4\alpha)-di-(4-pyridinyl)cyclobutane (8b), stereoselectively. The monomeric compounds showed good antimicrobial activity against test micro-organisms. The most sensitive micro-organisms were Gram-positive bacteria. The monomers also showed high antioxidant activity, while the dimerisation products 7-8a,b were less active. Compound 6 was found to have similar or even …

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Chemical Constituents Of Galium Tortumense, Zühal Güvenalp, Nurcan Kiliç, Cavi̇t Kazaz, Yusuf Kaya, L. Ömür Demi̇rezer Jan 2006

Chemical Constituents Of Galium Tortumense, Zühal Güvenalp, Nurcan Kiliç, Cavi̇t Kazaz, Yusuf Kaya, L. Ömür Demi̇rezer

Turkish Journal of Chemistry

From the aerial parts of Galium tortumense Ehrend & Schönb.-Tem., 8 iridoid glycosides, a flavonol glycoside, a oleanane-type triterpene acid, an ursan-type triterpene acid and a sterol were isolated. The structures of the compounds were elucidated by high field 1D and 2D NMR and EIMS spectroscopies.

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Synthesis And Vibrational Spectroscopic Study Of Some Metal(Ii) Halide And Tetracyanonickelate Complexes Of Isonicotinic Acid, Ahmet Ataç, Fehmi̇ Bardak Jan 2006

Synthesis And Vibrational Spectroscopic Study Of Some Metal(Ii) Halide And Tetracyanonickelate Complexes Of Isonicotinic Acid, Ahmet Ataç, Fehmi̇ Bardak

Turkish Journal of Chemistry

The M(IN)_2Ni(CN)_4 [where M: Cu, Mn, Zn, IN: Isonicotinic acid, abbreviated to M-Ni-IN] tetracyanonickelate and some metal halide complexes with the following stoichiometries: Cu(IN)X_2 (X:Br,I), Cd(IN)_2X_2, (X:Cl,Br), and Zn(IN)_4X_2 (X:Br,I) were synthesized for the first time. Their FT-IR spectra were reported in the 4000-400 cm^{-1} region. Vibrational assignments were given for all the observed bands. The analysis of the vibrational spectra indicates that there are some structure-spectrum correlations. For a given series of isomorphous complexes, the sum of the difference between the values of the vibrational modes of uncoordinated isonicotinic acid that were coordinated to the metal ion isonicotinic acid …

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Prediction Of Acidity Constants Of Thiazolidine-4-Carboxylic Acid Derivatives Using Ab Initio And Genetic Algorithm-Partial Least Squares, Ali Niazi, Saeed Jameh Bozorghi, Davood Nori Shargh Jan 2006

Prediction Of Acidity Constants Of Thiazolidine-4-Carboxylic Acid Derivatives Using Ab Initio And Genetic Algorithm-Partial Least Squares, Ali Niazi, Saeed Jameh Bozorghi, Davood Nori Shargh

Turkish Journal of Chemistry

A quantitative structure-property relationship study is suggested for the prediction of the acidity constants of some thiazolidine-4-carboxylic acid derivatives in aqueous solution. Ab initio theory was used to calculate some quantum chemical descriptors, including electrostatic potentials and local charges at each atom, highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) energies, etc. Modeling of the acidity constant of thiazolidine-4-carboxylic acid derivatives as a function of molecular structures was established by means of the partial least squares algorithm. The subset of descriptors, which resulted in a low prediction error, was selected by genetic algorithm. This model was applied …

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The Impact Of Polyacrylamide Molecular Weight On Its Adsorption Behavior At The Gold/Acidic Solution Interface, Dragica B. Chamovska, Toma P. Grchev, Maja V. Cvetkovska Jan 2006

The Impact Of Polyacrylamide Molecular Weight On Its Adsorption Behavior At The Gold/Acidic Solution Interface, Dragica B. Chamovska, Toma P. Grchev, Maja V. Cvetkovska

Turkish Journal of Chemistry

Adsorption isotherms for polyacrylamide (PAA) on polycrystalline gold, from sulfuric acid (potential range 0-2.0 V/she; 293 K), were obtained by means of cyclic voltammetry with simultaneous monitoring of the double-layer capacity. The Frumkin isotherm indicates that relatively strong attractive forces are present (a = 0.8-1.0), and the Gibbs energies range between 43 and 56 kJ mol^{-1}. The coverage (\theta) of the metal surface with polymer molecules depends on the molar concentration of PAA, as well as on its molecular weight, and the size of the statistical polymer coil in the solution (R_G = 7.49 \times 10^{-3} \times M_n^{0.64}/nm). The adsorption …

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Simple Synthesis Of \Alpha -Oxime Derivatives Of 2-Ketomethyl Quinolines Under Mild And Heterogeneous Conditions, Javad Safari, Mehdi Adib, Firouzeh Sheibani, Zahra Sadeghi Jan 2006

Simple Synthesis Of \Alpha -Oxime Derivatives Of 2-Ketomethyl Quinolines Under Mild And Heterogeneous Conditions, Javad Safari, Mehdi Adib, Firouzeh Sheibani, Zahra Sadeghi

Turkish Journal of Chemistry

2-Ketomethyl quinolines are converted to their \alpha-oximinoketone derivatives in quantitative yields using sodium nitrite in the presence of silica sulfuric acid as nitrosating agent under mild and heterogeneous conditions.

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A New Method For The Preparation Of Pyridazine Systems: Experimental Data And Semiempirical Pm3 Calculations, Di̇lek Ünal, Emi̇n Saripinar, Yunus Akçamur Jan 2006

A New Method For The Preparation Of Pyridazine Systems: Experimental Data And Semiempirical Pm3 Calculations, Di̇lek Ünal, Emi̇n Saripinar, Yunus Akçamur

Turkish Journal of Chemistry

The reactions of 4-benzoyl-5-phenyl-2,3-furandione (1a) and 4-(4-methoxybenzoyl)-5-(4-methoxyphenyl)-2,3-furandione (1b) with acyl hydrazines (2) (namely hydrazides) are reported. From these reactions, novel pyridazinone systems (3a-g) are obtained as well as the cyclization product of 3g at high temperature (4). The electronic properties and conformational parameters for these molecules, such as bond lengths, bond angles, torsion angles and atom charges, are calculated with a semiempirical PM3 method. In order to determine the mechanism of the reaction between the model furandion (R1) and formic hydrazide (R2), the electronic properties, conformational parameters and imaginary frequencies of the reactants, transition states and intermediates are calculated at …

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Synthesis, Spectroscopic (Ft-Ir, ^1h, ^{13}C, Mass Spectrometry), And Biological Investigation Of Five-Coordinated Germanium-Substituted Tricyclohexyl Antimony Dipropionates: Crystal Structure Of Tricyclohexylantimony Dibromide, Muhammad Kaleem Khosa, Muhammad Mazhar, Saqib Ali, Kieran C. Molloy, Sarim Dastgir, Farkhanda Shaheen Jan 2006

Synthesis, Spectroscopic (Ft-Ir, ^1h, ^{13}C, Mass Spectrometry), And Biological Investigation Of Five-Coordinated Germanium-Substituted Tricyclohexyl Antimony Dipropionates: Crystal Structure Of Tricyclohexylantimony Dibromide, Muhammad Kaleem Khosa, Muhammad Mazhar, Saqib Ali, Kieran C. Molloy, Sarim Dastgir, Farkhanda Shaheen

Turkish Journal of Chemistry

A series of five-coordinated germanium-substituted tricyclohexylantimony dipropionates have been synthesized and characterized by different instrumental techniques, such as elemental analyses, FT-IR, multinuclear NMR (^1H, ^{13}C) and mass spectrometry. These compounds have also been screened against different microbes and they showed good activity against different bacteria that was comparable to the reference drugs. The crystal structure of the precursor (C_6H_{11})_3SbBr_2 is reported here, which showed that the antimony atom in an asymmetric unit exists in trigonal bipyramidal geometry, having space group C2/c with the monoclinic crystal system.

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Template Synthesis And Structural Characterization Of Homo Binuclear Chromium(Iii), Manganese(Iii), Iron(Iii), Cobalt(Iii), And Ruthenium(Iii) Complexes With Octaazamacrocyclic Ligands, Vinod K. Sharma, Shipra Srivastava Jan 2006

Template Synthesis And Structural Characterization Of Homo Binuclear Chromium(Iii), Manganese(Iii), Iron(Iii), Cobalt(Iii), And Ruthenium(Iii) Complexes With Octaazamacrocyclic Ligands, Vinod K. Sharma, Shipra Srivastava

Turkish Journal of Chemistry

The Schiff base octaazamacrocyclic ligands derived from primary diamines and 3,6-dimethyl/diphenyl-4,5-diazaocta-3,5-diene-2,7-dione, and their binuclear complexes [M_2LCl_4]Cl_2 [M = Cr(III), Fe(III), Co(III), or Ru(III)] and [Mn_2L(AcO)_4](AcO)_2 were synthesized by template condensation reactions. Attempts to synthesize the corresponding metal-free macrocyclic ligands did not prove successful. The overall geometry and stereochemistry of these complexes were elucidated by elemental analyses, magnetic susceptibilities, electronic spectra, infrared spectra, molar conductance measurements, ^1H NMR, and thermogravimetric analysis. All the trivalent metal ion complexes appear to be 1:2 electrolytes. An octahedral geometry is proposed for all the complexes.

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Simulating Protein Evolution Via Thermodynamic Models, Yanlong Xu Jan 2006

Simulating Protein Evolution Via Thermodynamic Models, Yanlong Xu

LSU Doctoral Dissertations

Natural proteins are results of evolution and they need to maintain certain thermodynamic stabilities in order to carry out their biological functions. By simulating protein evolution based on thermodynamic rules, we could reconstruct the evolution trajectory and analyze the evolutionary dynamics of a protein population, and further understand the protein sequence-structure-function relationship. In this study, we have used both a simplified lattice model and a high-resolution atomic model to simulate protein evolution processes. With the lattice model, we have investigated general theoretical questions about how protein structural designability would affect protein evolution, particularly how it would affect protein recombination and …

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Infrared Laser Desorption/Ionization Mass Spectrometry: Fundamental And Applications, Mark Little Jan 2006

Infrared Laser Desorption/Ionization Mass Spectrometry: Fundamental And Applications, Mark Little

LSU Doctoral Dissertations

This dissertation on infrared laser desorption/ionization mass spectrometry encompasses fundamental studies of the desorption/ionization process and direct-from-gel laser desorption/ionization applications. Understanding of the fundamentals behind desorption and ionization can lead to improvements in the technique and to new applications. Experiments aimed at advancing this goal are wavelength studies and two-laser infrared/ultraviolet matrix-assisted laser desorption/ionization experiments. The direct-from-gel laser desorption/ionization application in which infrared laser desorption/ionization of analytes directly ionized after gel electrophoretic separation will also be presented. Protein and peptide standards were used as test analytes and the infrared lasers used were a 10.6 micrometers carbon-dioxide laser and a mid-IR …

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Multianalyte Detection Of Breast Cancer By Fabrication Of Hybridmicroarrays On Polymer-Based Microanalytical Devices, Suying Wei Jan 2006

Multianalyte Detection Of Breast Cancer By Fabrication Of Hybridmicroarrays On Polymer-Based Microanalytical Devices, Suying Wei

LSU Doctoral Dissertations

Breast cancer is one of the most common and fatal cancer diseases that affect women worldwide. As is true with most other cancer diseases, early detection of breast cancer is very crucial for proper medical treatment because treatment of advanced breast cancer will be much more difficult and inconsistent. Screening and testing of breast cancer biomarkers, either genetic or proteomic, are among techniques used for diagnosis of breast cancers. Nevertheless, none of the biomarkers is by itself sensitive and selective enough for diagnosis of breast cancer, and thus, multi-analyte assays towards detection of multiple breast cancer biomarkers from different classes …

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Characterization Of Beta-Amyloid Peptide Aggregation And Acceleration With Non-Fibrillar Forming Peptide-Based Mediators, Nadia J. Edwin Jan 2006

Characterization Of Beta-Amyloid Peptide Aggregation And Acceleration With Non-Fibrillar Forming Peptide-Based Mediators, Nadia J. Edwin

LSU Doctoral Dissertations

Protein aggregation occurs under many circumstances, from the dynamic assembly of tubulin to form microtubules, the aggregation of actin into filaments, as well as plaque formation by amyloid precipitation. One important requirement in studying the mechanism of amyloid aggregation is the ability to monitor the growth kinetics over a wide range in size scales (10 nm to microns) with time that spans microseconds to seconds. Understanding the mechanisms of the aggregation may then lead to improved design of drugs to help control or suppress the aggregation process. In this dissertation, the physical characterization of the â-amyloid peptide and its interaction …

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Syntheses And Biological Evaluation Of Water Soluble Carboranylporphyrins For Application In Boron Neutron Capture Therapy, Vijay Gottumukkala Jan 2006

Syntheses And Biological Evaluation Of Water Soluble Carboranylporphyrins For Application In Boron Neutron Capture Therapy, Vijay Gottumukkala

LSU Doctoral Dissertations

The goal of the research presented in this dissertation is to develop novel water soluble carboranylporphyrins that can deliver therapeutic dosage of boron specifically to tumors for application in boron neutron capture therapy. In order to accomplish this goal novel water soluble tetra(nido-carboranyl)porphyrin and the octa(nido-carboranyl)porphyrin with high boron contents are synthesized by the condensation of the carborane substituted benzaldehyde with the pyrrole under acidic conditions. These porphyrins are made water soluble by the deboronation of the closo-carboranes to afford the corresponding amphiphilic nido-carborane cages. The low cytotoxicity, high cellular uptake and intracellular localization of these carboranylporphyrins in tumor cells …

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Integrating Micro-Scale Separations To Matrix Assisted Laser Desorption And Ioniation Time Of Flight Mass Spectrometry (Maldi-Tof-Ms) For Protein Analysis, Harrison K. Musyimi Jan 2006

Integrating Micro-Scale Separations To Matrix Assisted Laser Desorption And Ioniation Time Of Flight Mass Spectrometry (Maldi-Tof-Ms) For Protein Analysis, Harrison K. Musyimi

LSU Doctoral Dissertations

This dissertation describes the integration of micro-scale separations to matrix assisted laser desorption and ionization time-of-flight mass spectrometry (MALDI TOF MS) for protein analysis. MALDI MS provides unsurpassed accurate mass measurements of intact bio-molecules, for example peptides and proteins, which in turn generate high molecular specificity enabling the identity, function and structure of these molecules to be characterized. However, in order to realize the full potential of MS in proteomic studies, integrated sample processing on automated and high throughput platforms is required to address the complexity, diversity and the dynamic range of proteomic analysis. The work described here contributes towards …

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Applications Of Titanium-Mediated Reductive Coupling And Cyclocarbonylation Reactions Toward Natural Product Synthesis, Maria A. Appeaning Jan 2006

Applications Of Titanium-Mediated Reductive Coupling And Cyclocarbonylation Reactions Toward Natural Product Synthesis, Maria A. Appeaning

LSU Doctoral Dissertations

Previous work in our laboratory has demonstrated not only a synthetic value of tandem reductive cyclization - carbonylation reactions in the preparation of complex molecules but also the interesting stereoselectivity observed therein. The first part of this work employs the titanium-mediated cyclocarbonylation of tethered dienals for the synthesis of prostaglandin analogues, in particular PGF2α and methyl jasmonate. Based on this hetero Pauson-Khand strategy, we have established an efficient racemic route to both the prostaglandin and the methyl jasmonate core skeletons. Moderate to excellent selectivities with regard to the hetero Pauson-Khand reaction were observed in both cases. The second part …

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Development Of Analytical Techniques For The Analysis Of Submicron Particles And Protein Aggregates, Yohannes H. Rezenom Jan 2006

Development Of Analytical Techniques For The Analysis Of Submicron Particles And Protein Aggregates, Yohannes H. Rezenom

LSU Doctoral Dissertations

The goal of the research presented in this dissertation is to develop analytical techniques for the analysis of heterogeneous mixtures of submicron particles and protein aggregates. In Chapter 2, a simple and reproducible technique for constructing perfectly aligned gaps in fused-silica capillaries has been developed for postcolumn reagent addition with capillary electrophoresis (CE) to take advantage of laser-induced fluorescence (LIF) detection. This technique uses laser ablation with a Nd:YAG laser to create gaps of 14.0 ¡Ó 2.2 ƒÝm. These structures have been used for reagent addition for postcolumn derivatization with LIF detection and have been tested for the separation of …

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Application Of Polymeric Microfluidic Devices For Separation Of Single-Stranded Dna, Shawn Llopis Jan 2006

Application Of Polymeric Microfluidic Devices For Separation Of Single-Stranded Dna, Shawn Llopis

LSU Doctoral Dissertations

Microsystems targeted for DNA sequencing, especially those focused on electrophoretic separations, are rapidly proving their viability to genomic research, mimicking the progress made when capillary electrophoresis developed from miniaturizing slab gel electrophoresis techniques. Being the more recent electrophoretic separation platform, the commercial availability of microchip electrophoresis devices remains relatively limited. To this extent, high-aspect ratio microstructures formed in thermo plastics have been developed using rapid fabrication methods from molding tools designed for mass replication of high-aspect ratio microfeatures. In this work, the choice and compatibility of poly(methylmethacrylate) (PMMA) – the primary substrate for DNA separations in this work – was …

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Two-Dimensional And High-Throughput Electrophoretic Separation Of Proteins Using Polymeric Microchips, Hamed Shadpour Jan 2006

Two-Dimensional And High-Throughput Electrophoretic Separation Of Proteins Using Polymeric Microchips, Hamed Shadpour

LSU Doctoral Dissertations

A major task in proteomics is to identify proteins from a biological sample using two-dimensional (2-D) separation prior to mass spectrometry of peptides generated via proteolytic digestion of the proteins. For 2-D separations, microfluidic devices are superior to bench top and capillary-based systems since they potentially provide higher separation efficiencies due to the minimal dead volumes produced during peak transfer between the two separation dimensions. In addition, fast separations can be envisioned because the column lengths are typically shorter in microfluidic platforms without scarifying peak capacity. High-throughput capabilities are extremely desirable for many types of bio-analytical analyses, such as understanding …

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Influence Of Surface Chemistry On The Aggregation Of Beta Amyloid Peptide, Mariah Joan Wooldridge Mcmasters Jan 2006

Influence Of Surface Chemistry On The Aggregation Of Beta Amyloid Peptide, Mariah Joan Wooldridge Mcmasters

LSU Doctoral Dissertations

Alzheimer's disease is a progressive neurological ailment affecting 4.5 million aging Americans. The disease is characterized by the presence in the brain of self-assembled fibrils consisting of beta amyloid protein (Aβ). Soluble Aβ protein is present in normal human cerebrospinal fluid, but it is unclear what makes the protein aggregate into insoluble plaques. There is evidence that the Aβ fibril assembly is affected by interactions with biological surfaces, such as neuronal membranes. Here, surfaces consisting of self-assembled alkanethiol monolayers with different end groups were used to test the effect of surface chemistry on the structure and morphology of aggregates formed …

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Synthesis, Characterization And Properties Of Cooper(Ii) Beta-Diketonate Macrocycles, Sylvester Burton Jan 2006

Synthesis, Characterization And Properties Of Cooper(Ii) Beta-Diketonate Macrocycles, Sylvester Burton

LSU Doctoral Dissertations

This dissertation deals with the synthesis and properties of multidentate β-diketone ligands and their transition-metal complexes. (1) We prepared two bis(β-diketones), C1BAH2 and p-XBAH2 (see sketch below), determined their crystal structures, and studied their reactions with copper(II). We envisioned that they would form macrocyclic complexes with 3-6 metal atoms. In both cases, although the initial products are soluble, as expected for the desired molecular products, we were unable to isolate well-behaved molecular solids. In the case of C1BAH2, this may be because the cyclic product requires an unusual combination of conformations of …

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The Mechanism Of Membrane Targeting Of Human Sphingosine Kinase 1, Robert V. Stahelin, Jeong H. Hwang, Jin-Hahn Kim, Zee-Yong Park, Korey R. Johnson, Lina M. Obeid, Wonhwa Cho Dec 2005

The Mechanism Of Membrane Targeting Of Human Sphingosine Kinase 1, Robert V. Stahelin, Jeong H. Hwang, Jin-Hahn Kim, Zee-Yong Park, Korey R. Johnson, Lina M. Obeid, Wonhwa Cho

Faculty Publications & Research

Sphingosine 1-phosphate is a bioactive sphingolipid that regu- lates cell growth and suppresses programmed cell death. The bio- synthesis of sphingosine 1-phosphate is catalyzed by sphingosine kinase (SK) but the mechanism by which the subcellular localization and activity of SK is regulated in response to various stimuli is not fully understood. To elucidate the origin and structural determi- nant of the specific subcellular localization of SK, we performed biophysical and cell studies of human SK1 (hSK1) and selected mutants. In vitro measurements showed that hSK1 selectively bound phosphatidylserine over other anionic phospholipids and strongly preferred the plasma membrane-mimicking membrane to …

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Discovery And Characterization Of The Cryptic Psi Subunit Of The Pseudomonad Dna Replicase, Thale C. Jarvis, Amber A. Beaudry, James M. Bullard, Urs Ochsner, H. Garry Dallmann, Charles S. Mchenry Dec 2005

Discovery And Characterization Of The Cryptic Psi Subunit Of The Pseudomonad Dna Replicase, Thale C. Jarvis, Amber A. Beaudry, James M. Bullard, Urs Ochsner, H. Garry Dallmann, Charles S. Mchenry

School of Integrative Biological & Chemical Sciences (Formerly Dept. of Chemistry)

We previously reconstituted a minimal DNA replicase from Pseudomonas aeruginosa consisting of α and ϵ (polymerase and editing nuclease), β (processivity factor), and the essential τ, δ, and δ′ components of the clamp loader complex (Jarvis, T., Beaudry, A., Bullard, J., Janjic, N., and McHenry, C. (2005) J. Biol. Chem. 280, 7890-7900). In Escherichia coli DNA polymerase III holoenzyme, χ and Ψ are tightly associated clamp loader accessory subunits. The addition of E. coli χΨ to the minimal P. aeruginosa replicase stimulated its activity, suggesting the existence of χ and Ψ counterparts in P. aeruginosa. The P. aeruginosa χ …

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Estimation Of Iron Solubility From Observations And A Global Aerosol Model, Chao Luo, N. M. Mahowald, N. Meskhidze, Y. Chen, R. L. Siefert, A. R. Baker, Anne M. Johansen Dec 2005

Estimation Of Iron Solubility From Observations And A Global Aerosol Model, Chao Luo, N. M. Mahowald, N. Meskhidze, Y. Chen, R. L. Siefert, A. R. Baker, Anne M. Johansen

All Faculty Scholarship for the College of the Sciences

Mineral aerosol deposition is the dominant source of iron to the open ocean. Soil iron is typically insoluble and understanding the atmospheric processes that convert insoluble iron to the more soluble forms observed over the oceans is crucial. In this paper, we model several proposed processes for the conversion of Fe(III) to Fe(II), and compare with cruise observations. The comparisons show that the model results in similar averaged magnitudes of iron solubility as measured during 8 cruises in 2001–2003. Comparisons show that results of cases including cloud, SO2 and hematite processing are better than the other approaches used using …

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Lead Optimization Of 7-Benzyloxy 2-(4′-Pyridylmethyl)Thio Isoflavone Aromatase Inhibitors, Bin Su, John C. Hackett, Edgar S. Diaz-Cruz, Young Woo Kim, Robert W. Brueggemeier Dec 2005

Lead Optimization Of 7-Benzyloxy 2-(4′-Pyridylmethyl)Thio Isoflavone Aromatase Inhibitors, Bin Su, John C. Hackett, Edgar S. Diaz-Cruz, Young Woo Kim, Robert W. Brueggemeier

Chemistry Faculty Publications

Aromatase, the enzyme responsible for estrogen biosynthesis, is a particularly attractive target in the treatment of hormone-dependent breast cancer. The synthesis and biological evaluation of a series of 2-(4′-pyridylmethyl)thio, 7-alkyl- or aryl-substituted isoflavones as potential aromatase inhibitors are described. The isoflavone derivatives demonstrate IC50 values from 79 to 553 nM and compete with the endogenous substrate, androstenedione. Data supporting the ability of these analogs to suppress aromatase enzyme activity in the SK-BR-3 breast cancer cell line are also presented.

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Cloning, Overexpression, Purification And Characterization On N-Terminal Metal Binding Domains 5 And 6 Of Wilsons Disease Protein, David Achila Dec 2005

Cloning, Overexpression, Purification And Characterization On N-Terminal Metal Binding Domains 5 And 6 Of Wilsons Disease Protein, David Achila

Masters Theses

Wilsons disease is an autosomal recessive disorder of copper metabolism which results from mutations in the gene encoding for Wilson disease protein (WDP). The cytosolic N-terminus of WDP comprises six metal binding domains each containing a conserved metal binding motif, GMXCXXC. The contribution of these metal binding domains to copper homeostasis is poorly understood. We have cloned, expressed and purified residues 485 to 633 corresponding to N-terminal metal-binding domains 5 and 6 of WDP (WD5-6). Two of the 3 disease causing mutations in the N-terminal metal binding domains of WDP occur one in each of these domains and the two …

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A Study Of How Precursor Key Concepts For Organic Chemistry Success Are Understood By General Chemistry Students, Patrick Gerard Meyer Dec 2005

A Study Of How Precursor Key Concepts For Organic Chemistry Success Are Understood By General Chemistry Students, Patrick Gerard Meyer

Dissertations

This study examines college student understanding of key concepts that will support future organic chemistry success as determined by university instructors. During four one-hour individual interviews the sixteen subjects attempted to solve general chemistry problems. A think-aloud protocol was used along with a whiteboard where the students could draw and illustrate their ideas. The protocols for the interviews were adapted from the Covalent Structure and Bonding two-tiered multiple choice diagnostic instrument (Peterson, Treagust, & Garnett, 1989) and augmented by the Geometry and Polarity of Moleculessingle-tiered multiple choice instrument (Furió & Calatayud, 1996). The interviews were videotaped, transcribed, and coded …

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