Digital Commons Network^™

Role Of Endoplasmic Reticulum Resident Proteins In Mediation Of Intrinsic Programmed Cell Death (Apoptosis), Surya Pramila Kilaparty

Theses and Dissertations

Inositol polyphosphates (InsPs) are signaling molecules that regulate various cellular processes including apoptosis. Among enzymes that metabolize InsPs, Multiple Inositol Polyphosphate Phosphatase1 (Minpp1) is the only enzyme located in the endoplasmic reticulum (ER). It dephosphorylates more phosphorylated InsPs to less phosphorylated InsPs in vitro. Changes in cellular InsPs are known to regulate apoptosis. Minpp1 is a member of the histidine acid phosphatase family of proteins with functional resemblance to phytases found in lower organisms. Its physiological function in higher animals is not clear. Besides its role in dephosphorylating InsPs, it has been shown to have mutase activity. This enzyme is …

Drivers Of Immune Cost And Implications For Host Protection From Parasites, Amber Jasmine Brace

USF Tampa Graduate Theses and Dissertations

Among species, populations, and individuals, there exists a tremendous amount of variation in how hosts respond to, and are thus protected from parasites. Such variation inevitably affects host-parasite dynamics and ultimately how parasites will move through and evolve in communities. A likely factor in the diversity of immune responses seen in nature are the costs associated with activation of the immune system upon exposure to parasites. Costs can manifest in many ways, including changes in resource usage or metabolism, self-damage from inflammatory reactions, lost opportunities (e.g., foraging reproduction), and often as tradeoffs with other physiological processes. However, we do not …

From Facultative To Obligatory Parental Care: Interspecific Variation In Offspring Dependency On Post-Hatching Care In Burying Beetles, Alexandra Capodeanu-Nägler, Eva M. Keppner, Manfred Ayasse, Heiko Vogel, Anne-Katrin Eggert, Scott K. Sakaluk, Sandra Steiger

Faculty Publications – Biological Sciences

Studies on the evolution of parental care have focused primarily on the costs and benefits of parental care and the life-history attributes that favour it. However, once care evolves, offspring in some taxa appear to become increasingly dependent on their parents. Although offspring dependency is a central theme in family life, the evolutionary dynamics leading to it are not fully understood. Beetles of the genus Nicrophorus are well known for their elaborate biparental care, including provisioning of their young. By manipulating the occurrence of pre- or post-hatching care, we show that the offspring of three burying beetle species, N. orbicollis …

Chemical Signaling In Asian Elephants (Elephas Maximus): Concentration Effects With Applications For Management And Conservation, Chase Andrew Ladue

Masters Theses & Specialist Projects

Asian elephants utilize two chemical signals that have been described to function in reproduction: (1) (Z)-7-dodecenyl acetate (Z7-12:Ac) is released by females near ovulation, and (2) frontalin is released by males around the time of musth. Signaling theory posits that the concentration at which either compound is emitted should have implications for the response of the receiver, varying with factors such as sex and reproductive experience. Here, the objectives were to: (1) investigate the effect of concentration on receiver chemosensory behavior in an effort to identify detection thresholds and concentrations of maximum response for reproductively experienced or inexperienced male and …

Effects Of Sleep Fragmentation On The Immune System Of Zebra Finches Using Cytokine Gene Expression, Laken N. Cooper

Masters Theses & Specialist Projects

Sleep loss is known to trigger an inflammatory response and increase serum corticosterone in both human and murine models. However, very little evidence is available on the potential effects of sleep loss in avian models. This study aims to construct a profile using cytokine gene expression data to determine how birds respond to sleep loss in a controlled environment. I investigated changes in pro-inflammatory (IL-1β and IL-6) and anti-inflammatory (IL-10) cytokine gene expression in the periphery (fat, liver, spleen, and heart) and brain (hypothalamus, hippocampus, and apical hyperpallium) in zebra finches exposed to a novel sleep fragmentation method. Serum corticosterone, …

Behavioral Responses Of Ringed And Spotted Salamanders To Diet-Related Cues From Predators, Kayla Shelton

Graduate Theses/Dissertations

Multiple species of Ambystoma can sometimes coexist in ponds, often forming a prey guild. In the Ozarks, ringed salamanders (Ambystoma annulatum) can coexist with marbled salamanders (A. opacum) and spotted salamanders (A. maculatum). Ringed and marbled salamanders lay their eggs in ponds in the fall and overwinter as larvae, whereas spotted salamanders breed in the spring. Ringed and marbled salamander larvae can be cannibalistic and can prey upon larvae of the other two species. Larvae should experience increased survival if they can discriminate between predators that have recently consumed another salamander (high risk) versus those that have not (low risk). …

Endozoochorous Spread Of Nonnative Plant Species By White-Tailed Deer, Odocoileus Virginianus, Andrew Jordan Spychalla

Graduate Theses/Dissertations

Movement of plant seeds can be facilitated by endozoochory in white-tailed deer (Odocoileus virginianus) and elk (Cervus elaphus), but at rates that are unknown in natural systems. Spread of planted forage crops into wildlands, or nonnative invasive weeds into food plots would affect ecosystem processes and management costs. To address endozoochory, collections of fecal pellets from both ungulate species were done at the Current River Conservation Area in Southeastern Missouri. Randomly chosen individual pellets collected from nine food plots were planted in a greenhouse setting. After cold stratification of pellets (2°C at 15 days), pellets were either left whole or …

Understanding Tradeoffs Between Food And Predation Risks In A Specialist Mammalian Herbivore, Jamie L. Utz, Lisa A. Shipley, Janet L. Rachlow, Tamara Johnstone-Yellin, Meghan Camp, Jennifer Sorenson Forbey

Biology Faculty Publications and Presentations

Understanding habitat use by animals requires understanding the simultaneous tradeoffs between food and predation risk within a landscape. Quantifying the synergy between patches that provide quality food and those that are safe from predators at a scale relevant to a foraging animal could better reveal the parameters that influence habitat selection. To understand more thoroughly how animals select habitat components, we investigated tradeoffs between diet quality and predation risk in a species endemic to sagebrush Artemisia spp. communities in North America, the pygmy rabbitBrachylagus idahoensis. This species is a rare example of a specialist herbivore that relies almost entirely …

Recumbence Behavior In Zoo Elephants: Determination Of Patterns And Frequency Of Recumbent Rest And Associated Environmental And Social Factors, Matthew Robert Holdgate, Cheryl L. Meehan, Jennifer N. Hogan, Lance J. Miller, Jeff Rushen, Anne-Marie De Passillé, Josesph Soltis, Jeff Andrews, David J. Shepherdson

Biology Faculty Publications and Presentations

Resting behaviors are an essential component of animal welfare but have received little attention in zoological research. African savanna elephant (Loxodonta africana) and Asian elephant (Elephas maximus) rest includes recumbent postures, but no large-scale investigation of African and Asian zoo elephant recumbence has been previously conducted. We used anklets equipped with accelerometers to measure recumbence in 72 adult female African (n = 44) and Asian (n = 28)elephants housed in 40 North American zoos. We collected 344 days of data and determined associations between recumbence and social, housing, management, and demographic factors. African elephants were recumbent less (2.1 hours/day, S.D. …

The Cranial Morphology Of The Black-Footed Ferret: A Comparison Of Wild And Captive Specimens, Tyler Antonelli

Theses and Dissertations

The black-footed ferret (Mustela nigripes), a North American mustelid species, was once found abundantly throughout the Midwest until extreme decline in prairie dogs, the black-footed ferrets primary food source, brought the species to near-extinction. This resulted in the development of the Black-Footed Ferret Recovery Program which included bringing the entire species into captivity with the intention of breeding the species back to sufficient numbers to allow for successful reintroduction. While in captivity, many components of the ferrets’ health were accounted for, but the current study aims to address the effects that captivity may have had on the cranial morphology of …

Dynamic Status Signal Reflects Outcome Of Social Interactions, But Not Energetic Stress, Keith A. Tarvin, L Jin Wong, David C. Lumpkin, Gabrielle M. Schroeder, Dominic D'Andrea, Sophie Meade, Pearl Rivers, Troy G. Murphy

Biology Faculty Research

Social defeat induces stress-responses in a wide array of vertebrates and can generate winner-loser effects. Dynamic condition-dependent signaling systems that reflect preparation for subsequent agonistic interactions, and thereby mediate winner-loser effects, should be more sensitive to competitive history than to non-social sources of stress. Bill color of female American goldfinches (Spinus tristus) is a dynamic condition-dependent ornament that functions as a signal of competitive status and mediates intrasexual agonistic social interactions. We tested the “social experience signaling hypothesis” in female goldfinches by (1) manipulating a non-social energetic stressor by experimentally elevating flight costs via wing-clipping in free-ranging birds, …

Botanical Therapeutics In The Modern World, Vyacheslav Dushenkov, Brittany L. Graf, Mary Ann Lila

Publications and Research

Plants are the source of a broad spectrum of biologically active phytochemicals. For effective defense against pathogens and abiotic stress, plants have developed complicated chemical strategies with different mechanisms of action. By harnessing these phytochemicals, humans have used plants for medicinal purposes for over 30,000 years, and they remain a valuable source for the development of modern therapeutics. Plant-derived materials are utilized as pharmaceuticals, botanical drugs, dietary supplements (nutraceuticals), functional food ingredients, and cosmeceuticals. The Global Institute for Bioexploration (GIBEX), an international conglomerate of researchers, is involved in multiple botanical therapeutics discovery and development programs.

Facilitating The Release Of Bionutrients From Morinda Citrifolia (Noni) By Cellulase Hydrolysis And Lactic Acid Bacteria Fermentation And Their Effects On Α-Amylase And Α-Glucosidase Activities, Hui-Hung Lee, Li-Jung Yin, Hsueh-Ming Tai, Shann-Tzong Jiang

Journal of Marine Science and Technology–Taiwan

For facilitating the release of bionutrients from noni, 6 h of hydrolysis with 100 U/mL cellulase at 50℃ and an additional 48 h of fermentation with Pediococcus pentosaceus BCRC 14053 at 37℃ were performed. Increases in the extraction yields (87.8-607.8 mg/g) and the total phenolic content (2.02-7.45 mg/g) of various extracts were obtained, suggesting that bionutrients were released from noni during hydrolysis or fermentation. In hydrolyzed and/or additionally fermented samples, significant decreases in the half maximal inhibitory concentration (IC50) against α-amylase (10.28-1.61 mg/mL) and α-glucosidase (46.47-3.73 mg/mL) were observed. Gas chromatography–mass spectrometry results revealed that the major components with these …

Offspring Size-Number Tradeoffs And Food Quality Feedbacks Impact Population Dynamics In A Daphnia-Algae System, Ryan Wenkus

College of Science and Health Theses and Dissertations

Population fluctuations can be affected by a number of extrinsic and intrinsic factors, but few manipulative experiments have been conducted that can isolate these effects in consumer-resource systems. Extrinsic factors such as weather patterns or food availability can impact consumer growth and reproduction. Additionally, intrinsic factors relating to life history can have significant impacts on population growth rates. A fundamental principle of life history theory is that individuals are limited by trade-offs between survival and reproduction, and there are a variety of combinations, given environment and physiological limitations, that should maximize lifetime reproductive output. Reproductive strategies vary between species, but …

Home-Field Advantage? Evidence Of Local Adaptation Among Plants, Soil, And Arbuscular Mycorrhizal Fungi Through Meta-Analysis, Megan A. Rúa, Anita Antoninka, Pedro M. Antunes, V Bala Chaudhary, Catherine Gehring, Louis J. Lamit, Bridget J. Piculell, James D. Bever, Cathy Zabinski, James F. Meadow, Marc J. Lajeunesse, Brook G. Milligan, Justine Karst, Jason D. Hoeksema

Integrative Biology Faculty and Staff Publications

BACKGROUND: Local adaptation, the differential success of genotypes in their native versus foreign environment, arises from various evolutionary processes, but the importance of concurrent abiotic and biotic factors as drivers of local adaptation has only recently been investigated. Local adaptation to biotic interactions may be particularly important for plants, as they associate with microbial symbionts that can significantly affect their fitness and may enable rapid evolution. The arbuscular mycorrhizal (AM) symbiosis is ideal for investigations of local adaptation because it is globally widespread among most plant taxa and can significantly affect plant growth and fitness. Using meta-analysis on 1170 studies …

Human Locomotion: Examining Energy Costs And Human Behavior Associated With Load-Carrying, Gailynn Benjamin

Honors Projects

The energy expenditure during load-carrying depends on the mass of the load, the position of the load on the body, and if tools are used to help transfer the load. When the load being carried is a human child, strategies employed to cope with the increased energetic burden should include males carrying older and heavier children, arm use decreasing as children become older, and tool use increasing as children become older. To uncover whether people make energetically-mediated decisions to carry children, 236 adult males and 314 adult females were observed walking around parks in Seattle, WA, while carrying a child. …

Stranding Mortality Patterns In California Sea Lions And Steller Sea Lions In Oregon And Southern Washington, 2006 To 2014, Kessina Lee

Dissertations and Theses

As changing ocean conditions lead to declining fish stocks and movement of forage fish, sea lions on the Oregon coast are subject to the pressures of declining prey availability and increasing conflicts with commercial and recreational fisheries. An analysis of strandings of California sea lions, Zalophus californianus, and Steller sea lions, Eumetopias jubatus, from 2006 to 2014, included cause of death, changing ocean conditions, and anthropogenic activity. Causes of death included disease, injury, and human interaction, such as gunshot wounds, fisheries net entanglements and boat strikes.

Oregon and Washington strandings of California sea lions are primarily adult and …

Biological Sciences Newsletter - June 2016, Department Of Biological Sciences, East Tennessee State University

Biological Sciences Newsletters

No abstract provided.

The Influence Of Juncus-Rhizosphere Dissolved Organic Matter On Coastal Plankton Communities, Brittany Zepernick, Robert Michael Mckay, George S. Bullerjahn, Jeffrey W. Krause, Behzad Mortazavi

Honors Projects

Many aquatic plants produce copious amounts of dissolved organic matter (DOM) which enters surrounding waters and potentially stimulates planktonic activity. In the northern Gulf of Mexico, Juncus roemarianus (i.e. black needlerush) is a dominant marsh grass species residing in coastal zones and barrier islands. The below-ground biomass i.e. rhizosphere, can be consistently submerged, serving as a potential source of DOM to the surrounding waters. The lability and possible stimulatory effect of J. roemarianus DOM was examined for three plankton communities collected within the discharge region of Mobile Bay and adjacent waters of Gulf Shores, Alabama (less affected by Mobile Bay). …

Proteolytic Cleavage Of Apolipoprotein E In The Down Syndrome Brain, Ryan J. Day, Katie L. Mccarty, Kayla E. Ockerse, Elizabeth Head, Troy T. Rohn

Biology Faculty Publications and Presentations

Down syndrome (DS) is one of the most common genetic causes of intellectual disability and is characterized by a number of behavioral as well as cognitive symptoms. Many of the neuropathological features of early-onset Alzheimer’s disease (AD) including senile plaques and neurofibrillary tangles (NFTs) are also present in people with DS as a result of triplication of the amyloid precursor gene on chromosome 21. Evidence suggests that harboring one or both apolipoprotein E4 (APOE4) alleles may increase the risk for AD due to the proteolytic cleavage of apoE4 and a subsequent loss of function. To investigate a role …

Management Of Sclerotium Rolfssi Through Methanolic Leaf Extract Of Alstonia Scholaris (L.) R. Br. And Azadirachta Indica L., Beenish Zia Butt, Nighat Sana, Saba Butt

Journal of Bioresource Management

Sclerotium rolfsii is a polyphagous soil borne fungus infecting more than 500 plant species across the world that is causing vast losses. Although the fungus is soil and seed borne, soil borne inoculum is most vital in infection-causing and syndrome development. Treating soil borne pathogens with fungicides is not reasonable due to very high costs. Environmental hazards are also involved. Therefore, integrated management of pathogens using biological controlling agents is the paramount alternative. Extracts of higher plants have demonstrated a wide range of activity against plant pathogenic organisms. The present research work was carried out to manage the pathogen and …

Effect Of Canopy Cover Of Capparis Decidua Forsk. On Soil Conditions In Thal Desert, Ghulam Yasin, Muhammad Farrakh Nawaz, Faiz Rasool, Muhammad Talha Bin Yousuf, Muhammad Qaisar Nazir, Atif Javed

Journal of Bioresource Management

Desert shrubs have a deep root system which allows them to explore the soil minerals and moisture from deeper horizons of soil and strongly support the local dwellers’ livelihoods. Capparis decidua (Forsk.) Edgew, generally known as karir, a xerophytic, densely branched shrub, is widely found in arid and semi-arid areas of Pakistan. The present study was conducted at four different sites in the Thal desert to determine the canopy effect of C. decidua on soil nutrients. Soil nutrients under the plant canopy (UC), at a distance of 150 cm away from the canopy (D150) and 300 cm away from the …

Evaluation Of Diver® Concentration Against Cotton Mealybug, Phenacoccus Solenopsis (Hemiptera: Pseudococcidae) And Its Parasitoid, Aenasius Bambawalei (Hymenoptera: Encyrtidae) In Laboratory, Muhammad Arfat Ashraf, Saif -Ur- Rehman, Nazeer Ahmed, Muhammad Salman Hameed, Saeed Ahmed, Zelle Huma

Journal of Bioresource Management

Bio-assay of Diver® for mealy-bug and its parasitoid, A. bambawalei, was carried out during 2010-2011 in the IPM Laboratory, Department of Agri. Entomology, University of Agriculture, Faisalabad. All the concentrations of Diver®, which were applied in laboratory conditions, were effective against mealy-bug. Diver® is the best mineral oil to control mealy-bug when compared to other synthetic pesticides. On the numerical basis of data, which were recorded on mortality basis, the highest concentration of Diver® was most effective against mealy-bug, followed by the other concentrations. All the concentrations of Diver® on the parasitoid of mealy-bug swerve less and their effects …

Rickettsia Parkeri Colonization In Ambylomma Maculatum: The Role Of Superoxide Dismutases, Gary Crispell, Khemraj Budachetri, Shahid Karim

Faculty Publications

Background

The Gulf Coast tick (Amblyomma maculatum) is an arthropod vector of Rickettsia parkeri, the causative agent of American boutonneuse fever and an infectious agent of public health significance. In this study, we evaluated the biological significance of the superoxide dismutases (SODs) of A. maculatum in hematophagy and R. parkeri colonization within the tick host.

Methods

An RNA interference approach was used to measure the functional roles of tick SODs (Cu/Zn-SOD and Mn-SOD) in R. parkeri colonization of the tick vector. Total microbial load, R. parkeri infection rate, and compensatory mechanisms by tick genes were …

Non-Specific Phospholipase C1 Affects Silicon Distribution And Mechanical Strength In Stem Nodes Of Rice, Huasheng Cao, Lin Zhuo, Yuan Su, Linxiao Sun, Xuemin Wang

Biology Department Faculty Works

Silicon, the second abundant element in the crust, is beneficial for plant growth, mechanical strength, and stress responses. Here we show that manipulation of the non‐specific phospholipase C1, NPC1, alters silicon content in nodes and husks of rice (Oryza sativa). Silicon content in NPC1‐overexpressing (OE) plants was decreased in nodes but increased in husks compared to wild‐type, whereas RNAi suppression of NPC1 resulted in the opposite changes to those of NPC1‐OE plants. NPC1 from rice hydrolyzed phospholipids and galactolipids to generate diacylglycerol that can be phosphorylated to phosphatidic acid. Phosphatidic acid interacts with Lsi6, a silicon transporter that is expressed …

Metal Selectivity And Acquisition By The Yersiniabactin Metallophore System In Escherichia Coli, Eun-Ik Koh

Arts & Sciences Graduate Student Theses and Dissertations

Urinary tract infections (UTI) are one of the most common bacterial infections, of which, the majority are caused by uropathogenic Escherichia coli (UPEC). Many bacterial pathogens including UPEC synthesize and secrete chemically diverse metabolites called siderophores, which are classically defined by their ability of bind and deliver iron(III), an essential nutrient, to pathogens during infections. UPEC isolates can express multiple siderophore systems, of which, the virulence-associated siderophore yersiniabactin (Ybt) binds to both iron(III) and copper(II) during urinary tract infections. In this thesis we show that Ybt interacts with multiple physiologic transition metals and acts as a metallophore system to deliver …

Physiological And Behavioral Effects Of High Fat Diet Removal And Wheel Running In C57bl/6j Mice, Aikaterini Hatzidis

Honors Program Theses and Projects

The possibility of developing Type 2 Diabetes Mellitus (T2DM) is determined by a combination of genetic factors and the lifestyle of the individual. Higher risks of T2DM diagnosis occur when individuals are exposed to lifestyle factors such as physical inactivity and high fat diet consumption. Animal models, including mice, are consistently used in laboratory studies to understand T2DM in humans due to genetic and physiological similarities. This study focuses on whether change of diet and increased exercise can reduce obesity and alleviate T2DM symptoms in C57BL/6J (B6) mice. Changes in weight, anxiety-like behaviors, leptin and insulin levels and glucose tolerance …

Changes In Oxidative Patterns During Dormancy Break By Warm And Cold Stratification In Seeds Of An Edible Fruit Tree, Dilinuer Shalimu, Jia Sun, Carol C. Baskin, Jerry M. Baskin, Liwei Sun, Yujun Liu

Biology Faculty Publications

The transition from seed dormancy to germination is triggered by environmental factors, and in pomegranate (Punica granatum) seeds higher germination percentages are achieved by warm + cold stratification rather than by cold stratification alone. Our objective was to define the pattern of internal oxidative changes in pomegranate seeds as dormancy was being broken by warm + cold stratification and by cold stratification alone. Embryos isolated from seeds after 1–42 days of warm stratification, after 56 days of warm stratification + 7, 28 or 56 days of cold stratification, and after 1–84 days of cold stratification alone, were used …

Foodshare Columbia: Fostering A Healthier Community, Mavinder Kaur Guram

Senior Theses

For my thesis project, I developed a wholesale produce co-op to provide fresh produce to low-income families in Columbia with Dr. Gregg Talente and Ms. Beverly Wilson at the USC School of Medicine. Low-income populations lack access to healthy foods due not only to cost, but also limited proficiencies in skills required to prepare healthy foods. In an effort to address these issues, FoodShare Columbia was created. A community-based co-op, FoodShare was formed to foster a healthier community by improving access to nutritious, affordable foods. The program functions through the use of a Fresh Food Box (box of fresh produce …

Germline Defects Caused By Smed-Boule Rna-Interference Reveal That Egg Capsule Deposition Occurs Independently Of Fertilization, Ovulation, Mating, Or The Presence Of Gametes In Planarian Flatworms, Jessica Kathryne Steiner, Junichi Tasaki, Labib Rouhana

Biological Sciences Faculty Publications

Few animals are known to lay eggs in the absence of ovulation or copulation, as it is presumably energetically wasteful and subjected to negative selection. Characterization of Smed-boule, a member of the DAZ family of germline RNA-binding proteins, revealed that egg capsule (or capsule) production and deposition occurs independently of the presence of gametes in the planarian flatworm Schmidtea mediterranea. Reduction of Smed-boule expression by RNA-interference (RNAi) causes ablation of spermatogonial stem cells and the inability of ovarian germline stem cells to undergo oogenesis. Although animals subjected to Smed-boule RNAi lose their gametes and become sterile, they continue …