Digital Commons Network^™

Identification Of Serum Predictors Of N-Acetyl-L-Cysteine And Isoproterenol Induced Remodelling In Cardiac Hypertrophy, Dharaniyambigai Kuberapandian, Victor Arokia Doss

Turkish Journal of Biology

Cardiac hypertrophy (CH), leading to cardiac failure is due to chronic metabolic alterations occurring during cellular stress. Besides the already known relationship between oxidative stress and CH, there are implications of reductive stress leading to CH. This study attempted to develop reductive stress-based CH rat model using n-acetyl-L-cysteine (NAC), a glutathione agonist that was compared with typical isoproterenol (ISO) induced CH model. The main objective was to identify serum metabolites that can serve as potent predictors for seven routine clinical and diagnostic parameters in CH: 3-hydroxybutyrate (3-HB), lactic acid (LA), urea, and ECG-CH parameters (QRS complex, R-amplitude, R-R interval, heart …

Incorporation Of Summer Annual Mixtures Into Grazing Systems In Kentucky, Kelly Marie Mercier

Theses and Dissertations--Plant and Soil Sciences

Utilizing summer annual grass-legume forage mixtures has the potential to improve forage yield and nutritive characteristics, and/or animal performance during times when cool-season pasture growth is limited by high temperatures. Legumes can utilize atmospheric nitrogen, which can increase crude protein and forage digestibility in mixtures. As nitrogen application generally improves both the yield and nutritive characteristics of summer annual forages, but can have a negative effect on legume competitiveness, nitrogen fertilizer recommendations for legume-containing summer annual mixtures are not well established.

Two experiments were conducted to determine the feasibility of utilizing summer annual mixtures in Kentucky, USA. The first experiment …

Lessons From Four Decades Of Monitoring Vegetation And Fire: Maintaining Diversity And Resilience In Florida's Uplands, Warren G. Abrahamson Ii, Christy R. Abrahamson, Matthew A. Keller

Faculty Journal Articles

Worldwide, humans are altering the fire regimes of fire-prone ecosystems. Efforts to restore fire regimes in natural areas are usually guided by fire-management plans (FMP) using prescribed burning. We assessed an FMP by repeatedly sampling 11 Florida uplands impacted by 2 to 11 fires each during a 38-year period. Stands exhibited ecological resilience with little plant composition change and modest abundance shifts. Resilience was not eroded by repeated FMP-prescribed fires. Species richness and diversity were significantly higher at the end vs. beginning of our study, suggesting that FMP-applied fire regimes are within the range of those with which species evolved. …

There’S More Than One Way To Beat The Heat: What Anal Probes Reveal About Thermal Responses In Neotropical Beetles (Coleoptera: Cerambycidae)., Emilie I. Dion

Dissertations and Theses

Increasing global temperatures have been linked to shifts in the distributions and preferred microhabitats of terrestrial species. This trend is predicted to impact tropical forest insects, which may already be exposed to conditions that bring them close to their thermal maxima. Tropical microhabitats are linked to vertical stratification, because the canopy is hotter, winder, and less humid than the ground. In ectothermic organisms, such as beetles, thermoregulation is dependent on morphological and behavioral traits. This study investigates woodboring cerambycid beetles, to determine how behavioral thermoregulation through microhabitat selection (vertical stratification) is correlated to morphological attributes (color lightness, size, and pubescence) …

Analyzing Ultrastructural Characteristics Of Post-Synaptic Targets Of Pre-Identified Presynaptic Boutons In Layer 3 And Layer 4 Of The Ferret Primary Visual Cortex, Donia Shehab

Dissertations and Theses

The purpose of this study was to analyze the size and ultrastructural characteristics of post-synaptic elements apposed to previously characterized pre-synaptic elements in layers 3 and 4 of the primary visual cortex (PVC). We are aiming to quantify a range of values for synaptic element morphologies as well as to correlate pre- and post-synaptic elements to find a set of rules that is prevalent in the visual cortex that can also be upheld in other mammals. We hypothesize that bigger pre-synaptic elements correlate to bigger synapses and bigger post-synaptic elements. We compared these two different layers because they receive synaptic …

A Functional Genomics Screen Identifying Blood Cell Development Genes In Drosophila By Undergraduates Participating In A Course-Based Research Experience, Cory J. Evans, John M. Olson, Bama Charan Mondal, Pratyush Kandimalla, Ariano Abbasi, Mai M. Abdusamad, Osvaldo Acosta, Julia A. Ainsworth, Haris M. Akram, Ralph B. Albert, Elitzander Alegria-Leal, Kai Y. Alexander, Angelica C. Ayala, Nataliya S. Balashova, Rebecca M. Barber, Harmanjit Bassi, Sean P. Bennion, Miriam Beyder, Kush V. Bhatt, Chinmay Bhoot, Aaron W. Bradshaw, Tierney G. Brannigan, Boyu Cao, Yancey Y. Cashell, Timothy Chai, Alex W. Chan, Carissa Chan, Inho Chang, Jonathan Chang, Michael T. Chang, Patrick W. Chang, Stephen Chang, Neel Chari

Biology Faculty Works

Undergraduate students participating in the UCLA Undergraduate Research Consortium for Functional Genomics (URCFG) have conducted a two-phased screen using RNA interference (RNAi) in combination with fluorescent reporter proteins to identify genes important for hematopoiesis in Drosophila. This screen disrupted the function of approximately 3500 genes and identified 137 candidate genes for which loss of function leads to observable changes in the hematopoietic development. Targeting RNAi to maturing, progenitor, and regulatory cell types identified key subsets that either limit or promote blood cell maturation. Bioinformatic analysis reveals gene enrichment in several previously uncharacterized areas, including RNA processing and export and vesicular …

Characterizing Industrial And Artisanal Fishing Vessel Catch Composition Using Environmental Dna And Satellite-Based Tracking Data, Demian A. Willette, Gabriela Navarrete-Forero, Zachary Gold, Apollo Marco D. Lizano, Leonardo Gonzalez-Smith, Giovanna Sotil

Biology Faculty Works

The decline in wild-caught fisheries paired with increasing global seafood demand is pushing the need for seafood sustainability to the forefront of national and regional priorities. Validation of species identity is a crucial early step, yet conventional monitoring and surveillance tools are limited in their effectiveness because they are extremely time-consuming and require expertise in fish identification. DNA barcoding methods are a versatile tool for the genetic monitoring of wildlife products; however, they are also limited by requiring individual tissue samples from target specimens which may not always be possible given the speed and scale of seafood operations. To circumvent …

Testing The Effect Of Aquarium-Based Learning On Patron Acceptance Of Evolutionary Theory, Jamie Jensen, Ethan R. Tolman, Spencer G. Shumway, Liam S. Williams

ScholarsArchive Data

This is data collected prior to and directly following an intervention at a public aquarium in Idaho surrounding the reconciliation of evolution with religious audiences.

Plaster Creek Floodplain And Adjacent Ravines Near Stanaback Park: Botanical Inventory Highlights And Management Considerations, David Warners, Garrett Crow, Haley Weesies

Faculty and Professional Research

In the summer of 2021, the research team visited this area of ravines and floodplain a total of twenty-one times to conduct our field research. During the visits, they carefully walked throughout different sections of the study site, identifying each vascular plant species they saw growing there and observing how the flora developed throughout the season. In addition to keeping detailed field notes, they documented permanent records of the findings of our inventory by collecting voucher specimens that have been deposited in the Calvin University Herbarium. Additionally, they sent duplicate specimens to the Michigan State University Herbarium and/or University of …

Genetic Variation Within A Species Of Parasitic Nematode, Skrjabingylus Chitwoodorum, In Skunks, Allie N. Denham, Malorri R. Hughes, Robert C. Dowler, Nicholas J. Negovetich, Loren K. Ammerman

Biology Faculty Publications and Presentations

Carnivores in the families Mustelidae and Mephitidae are essential hosts for the cranial roundworm genus Skrjabingylus. A high prevalence of Skrjabingylus chitwoodorum has been observed in the striped skunk, Mephitis mephitis. Genetic barcoding studies of other nematodes have successfully used the cytochrome oxidase I (COI) mitochondrial gene to analyze genetic variation and divergence. We tested the hypothesis that low population structuring occurs within S. chitwoodorum because M. mephitis is widespread across much of North America and has high levels of gene flow. We extracted DNA from 38 samples of Skrjabingylus removed from the sinuses of M. mephitis and one from …

Menthol To Induce Non-Shivering Thermogenesis Via Trpm8/Pka Signaling For Treatment Of Obesity, Owen Sanders, Jayalekshmi Rajagopalan, Lekshmy Rajagopal

Biology Faculty Publications and Presentations

Increasing basal energy expenditure via uncoupling protein 1 (UCP1)-dependent non-shivering thermogenesis is an attractive therapeutic strategy for treatment of obesity. Transient receptor potential melastatin 8 (TRPM8) channel activation by cold and cold mimetics induces UCP1 transcription and prevents obesity in animals, but the clinical relevance of this relationship remains incompletely understood. A review of TRPM8 channel agonism for treatment of obesity focusing on menthol was undertaken. Adipocyte TRPM8 activation results in Ca2+ influx and protein kinase A (PKA) activation, which induces mitochondrial elongation, mitochondrial localization to lipid droplets, lipolysis, β-oxidation, and UCP1 expression. Ca2+-induced mitochondrial reactive oxygen species activate UCP1. …

The Validation Of Predicted Biological Age Of Drosophila Melanogaster From Combined Statistical Modeling, Lauren Francis

Masters Theses

"Sleep is essential for maintaining a healthy body and mind and is associated with aging and aging related diseases. There are individual differences in fly as well as human sleep behavior and lifespan. Between and within individuals, sleep varies in characteristics including consolidation, rhythmicity, continuity, duration, and more. Various evidence in the literature suggests there are many molecular pathways involved with aging and they may be different for individuals. Our research is interested in a possible restorative mechanism of sleep and the ramifications of that mechanism to aging. We have developed two predictive models of aging using the fruit fly …

Testing A Global Standard For Quantifying Species Recovery And Assessing Conservation Impact, Molly K. Grace, John Carroll, 201 Other Scholars

School of Biological Sciences: Faculty Publications

Recognizing the imperative to evaluate species recovery and conservation impact, in 2012 the International Union for Conservation of Nature (IUCN) called for development of a “Green List of Species” (now the IUCN Green Status of Species). A draft Green Status framework for assessing species’ progress toward recovery, published in 2018, proposed 2 separate but interlinked components: a standardized method (i.e., measurement against benchmarks of species’ viability, functionality, and preimpact distribution) to determine current species recovery status (herein species recovery score) and application of that method to estimate past and potential future impacts of conservation based on 4 metrics ( …

Diversity And Taxonomy Of Malagasy Pygmy Hippopotamuses, Allison Shackelton

Graduate Research Theses & Dissertations

Madagascar has many species of extinct megafauna, including up to three species of extinct hippopotamus. Subfossil hippo specimens have been found at sites across Madagascar, yet the number of species and taxonomic relationships of the extinct Malagasy pygmy hippopotamus are poorly understood. This thesis will analyze cranial and postcranial bones to improve our understanding of the diversity and taxonomy of Malagasy subfossil hippos, focusing on adults from Ampasambazimba and Tsaramody and juveniles from Ampasambazimba and Anjohibe. Measurements of the tibia and femur of adult specimens, which are used as diagnostic features in other studies, may not be accurate diagnostic features, …

Feeding Habits Of The Non-Native Mayan Cichlid, Mayaheros Urophthalmus, In Estuarine Tributaries Of Southwest Florida, Copley H. Smoak, Jeffrey R. Schmid

Gulf and Caribbean Research

Foraging habits of the non—native Mayan Cichlid (Mayaheros urophthalmus) were investigated in the tidal tributaries to the Estero Bay and Wiggins Pass estuaries in southwest Florida (USA) during 2011—2013. Dietary analysis was conducted by identifying contents in the digestive tracts of 747 fish and volumetrically measuring the food items. Detritus was the predominant food item by frequency (97–100%), volume (34–48%), and alimentary importance index (47–64%). Bivalves, gastropods, decapod and cirriped crustaceans, coleopterans, serpulid polychaetes, and fish scales frequently (>50%) occurred in samples but volume and importance differed among tributaries. Results indicate that the Mayan Cichlid in southwest Florida tidal …

Ghanaian Immigrant Women In The United States Beliefs About Maternal Nutrition And Fetal Development, Yassi Azhdari

Walden Dissertations and Doctoral Studies

Ghanaian women, in their native country, experience a high rate of anemia, malaria, and malnutrition while pregnant. Poor health outcomes for mother and child are caused by a lack of protein in their diet, food taboos, consumption of nutrient-poor foods, and infections. These conditions may cause pregnancy complications such as premature birth, or maternal or fetal death. There is little known about, the differences between the Ghanaian and U.S. birth experience, and foods used by Ghanaian immigrant women while pregnant. The biopsychosocial model was used in this descriptive qualitative study to examine how Ghanaian immigrant women are impacted by pregnancy …

Knowledge And Perceptions Of Antibiotic Resistance Stewardship Among Prehealth And Agriculture Students, Claudia Maria Da Silva Carvalho

Walden Dissertations and Doctoral Studies

The global threat of antibiotic resistant infection has resulted in health organizations to compile an antibiotic stewardship program, in which the education of current/future medical prescribers and farmers is central for the preservation of current and future antimicrobial treatments. The purpose of this study was to assess and compare the knowledge and perceived threat of antibiotic and antibiotic resistance, as well as the perceived benefit of antibiotic stewardship, among undergraduate students in biology and agriculture at a state university in Kansas. Framed by the health belief model, a cross-sectional study was conducted using a structured online survey of 136 undergraduate …

Il-27 Signaling In The Maintenance Of Intestinal Barrier Following Ethanol Intoxication And Burn Injury, Marisa Luck

Dissertations

Roughly half of burn patients that are hospitalized in the United States each year have detectable blood alcohol levels. Alcohol intoxication at the time of burn injury leads to worse outcomes, including longer hospital stays, increased rates of infection, and death. One of the severe consequences of intoxication and burn injury is the disruption of the gastrointestinal (GI) tract, which houses the largest reservoir of bacteria in the human body. Leakiness of the gut barrier can contribute to inflammation, infection, or sepsis from gut-derived microbes. Interleukin-27 (IL-27) is a cytokine that has shown some beneficial effects in other models of …

Effects Of Body Temperature On Initial Bite Force In Three Species Of Rock- And Crevice-Dwelling Lizards From Mexico, Guillermo A. Woolrich-Piña, Geoffrey R. Smith, Norberto Martínez-Méndez, Julio A. Lemos-Espinal, Héctor Gadsden-Esparz

Faculty Publications

No abstract provided.

Effects Of Microcystis Aeruginosa On New Jersey Aquatic Benthic Macroinvertebrates, Stephanie Beck, Meiyin Wu

Department of Biology Faculty Scholarship and Creative Works

As increases in anthropogenic eutrophication and climate change contribute to more severe and frequent cyanobacterial harmful algal blooms in freshwater ecosystems worldwide, understanding the effects and consequences cyanobacterial blooms have on aquatic organisms is crucial. Microcystis aeruginosa is one of the most common cyanobacteria taxa found in cyanobacterial blooms, producing a number of toxins including Microcystins. This study examined the effects of Microcystis aeruginosa on aquatic benthic macroinvertebrates, specifically the pollution intolerant taxa Ephemeroptera, the pollution moderately intolerant taxa Zygoptera, and the pollution tolerant taxa Chironomidae. In a controlled lab environment, macroinvertebrates were exposed to approximately 100,000 cells/ml of Microcystis …

Effects Of Microcystis Aeruginosa On New Jersey Aquatic Benthic Macroinvertebrates, Stephanie Beck

Theses, Dissertations and Culminating Projects

As increases in anthropogenic eutrophication and climate change contribute to more severe and frequent cyanobacterial harmful algal blooms in freshwater ecosystems worldwide, understanding the effects and consequences cyanobacterial blooms have on aquatic organisms is crucial. Microcystis aeruginosa is one of the most common cyanobacteria taxa found in cyanobacterial blooms, producing a number of toxins including Microcystins. This study examined the effects of Microcystis aeruginosa on aquatic benthic macroinvertebrates, specifically the pollution intolerant taxa Ephemeroptera, the pollution moderately intolerant taxa Zygoptera, and the pollution tolerant taxa Chironomidae. In a controlled lab environment, macroinvertebrates were exposed to approximately 100,000 cells/ml of Microcystis …

The Mechanisms And Consequences Of Shrub Encroachment On The Virginia Barrier Islands, Lauren K. Wood

Theses and Dissertations

Shrub encroachment is a global phenomenon driven by direct and indirect anthropogenic influence which alters plant communities and ecosystem function. Many studies have investigated drivers and consequences of woody plant establishment, but mesic landscapes are underrepresented in the literature. My objective was to assess the mechanisms of Morella cerifera encroachment into coastal mesic grassland, the potential for self-reinforcement, and consequences on community composition, nutrients, and landscape productivity. I studied temperature and water microclimate modification by Morella cerifera presence and removal to understand ecosystem engineering and community composition changes. Additionally, I examined the influence of shrubs on surrounding grassland species traits …

Sperm Fate Is Promoted By The Mir-44 Microrna Family In The Caenorhabditis Elegans Hermaphrodite Germline, Katherine Ann Maniates, Benjamin S. Olson, Allison L. Abbott

Biological Sciences Faculty Research and Publications

Posttranscriptional regulation of gene expression, typically effected by RNA-binding proteins, microRNAs (miRNAs), and translation initiation factors, is essential for normal germ cell function. Numerous miRNAs have been detected in the germline; however, the functions of specific miRNAs remain largely unknown. Functions of miRNAs have been difficult to determine as miRNAs often modestly repress target mRNAs and are suggested to sculpt or fine tune gene expression to allow for the robust expression of cell fates. In Caenorhabditis elegans hermaphrodites, cell fate decisions are made for germline sex determination during larval development when sperm are generated in a short window before the …

Early Olfactory, But Not Gustatory Processing, Is Affected By The Selection Of Heritable Cognitive Phenotypes In Honey Bee, Meghan M. Bennett, Chelsea N. Cook, Brian H. Smith, Hong Lei

Biological Sciences Faculty Research and Publications

Associative learning enables animals to predict rewards or punishments by their associations with predictive stimuli, while non-associative learning occurs without reinforcement. The latter includes latent inhibition (LI), whereby animals learn to ignore an inconsequential ‘familiar’ stimulus. Individual honey bees display heritable differences in expression of LI. We examined the behavioral and neuronal responses between honey bee genetic lines exhibiting high and low LI. We observed, as in previous studies, that high LI lines learned a familiar odor more slowly than low LI bees. By measuring gustatory responses to sucrose, we determined that perception of sucrose reward was similar between both …

A Comparison Of The Foraging Biology Of Two Tropical Gecko Species In Disturbed Areas, Charles Cummings, Tony Gamble, Michael Wells

Biological Sciences Faculty Research and Publications

The traditional foraging mode dichotomy in lizards has been one of ambush predators vs. wide ranging predators. Each mode has been associated with its own suite of other complementary characteristics, including metabolic rates, sensory capacities, as well as predator and prey species. While foraging mode within lizard families is often consistent, few studies have compared the foraging modes of sympatric members of a clade in which one species is nocturnal and the other diurnal. Hemidactylus frenatus, an introduced, nocturnal house gecko, and Gonatodes albogularis, a native, diurnal species, inhabit disturbed habitats in Costa Rica. Using traditional movement-based indices, moves per …

Nitrogen Fixation: A Poorly Understood Process Along The Freshwater-Marine Continuum, Amy M. Marcarelli, Robinson W. Fulweiler, J. Thad Scott

Michigan Tech Publications, Part 1

N2 fixation is a major component of the global N cycle and has been extensively studied in open-ocean and terrestrial ecosystems. Yet rates and ecological dynamics remain virtually unknown for the inland and coastal aquatic ecosystems (lakes, wetlands, rivers, streams, and estuaries) that connect terrestrial and marine biomes. This is due to the diversity of these habitats as well as the traditional paradigm that N2 fixation rates were low to nonexistent, and therefore not important, in these ecosystems. We identify three major research themes to advance understanding of aquatic N2 fixation: (1) the biological diversity of diazotrophs and variability of …

Differential Patterns Of Microbiota Recovery In Symbiotic And Aposymbiotic Corals Following Antibiotic Disturbance, Shavonna M. Bent, Carolyn A. Miller, Koty H. Sharp, Colleen M. Hansel, Amy Apprill

Arts & Sciences Faculty Publications

Microbial relationships are critical to coral health, and changes in microbiomes are often exhibited following environmental disturbance. However, the dynamics of coral-microbial composition and external factors that govern coral microbiome assembly and response to disturbance remain largely uncharacterized. Here, we investigated how antibiotic-induced disturbance affects the coral mucus microbiota in the facultatively symbiotic temperate coral Astrangia poculata, which occurs naturally with high (symbiotic) or low (aposymbiotic) densities of the endosymbiotic dinoflagellate Breviolum psygmophilum. We also explored how differences in the mucus microbiome of natural and disturbed A. poculata colonies affected levels of extracellular superoxide, a reactive oxygen species thought to …

Testosterone Amplifies The Negative Valence Of An Agonistic Gestural Display By Exploiting Receiver Perceptual Bias, Nigel K. Anderson, Martina Grabner, Lisa A. Mangiamele, Doris Preininger, Matthew J. Fuxjager

Biological Sciences: Faculty Publications

Many animals communicate by performing elaborate displays that are incredibly extravagant and wildly bizarre. So, how do these displays evolve? One idea is that innate sensory biases arbitrarily favour the emergence of certain display traits over others, leading to the design of an unusual display. Here, we study how physiological factors associated with signal production influence this process, a topic that has received almost no attention. We focus on a tropical frog, whose males compete for access to females by performing an elaborate waving display. Our results show that sex hormones like testosterone regulate specific display gestures that exploit a …

Geometric Morphometric Analyses Define Riverine And Lacustrine Species Flocks Of Himalayan Snowtrout (Cyprinidae: Schizothorax) In Nepal, Binod Regmi, Marlis R. Douglas, David R. Edds, Michael E. Douglas

Biological Sciences Faculty Publications and Presentations

Freshwater fishes in the river and lake systems in the Himalayas and Tibetan Plateau are morphologically diverged but the evolutionary relationship of putative subspecies separated in these freshwater systems has not been explored. Snowtrout (Schizothorax spp.) are minnows (Cyprinidae) broadly distributed in Asia. Body shapes of 3 Lake Rara (northwest Nepal) endemics (S. macrophthalmus, S. nepalensis, S. raraensis) and 2 widely distributed riverine species (S. progastus, S. richardsonii) across 3 drainages in Nepal (i.e. Karnali, Gandaki, and Koshi Rivers) were studied using geometric morphometry. Data were derived from museum voucher specimens/tissues collected …

Elucidation Of Multi-Origin Inula Helenium L. For Antimicrobial Activity And Heavy Metal Profiling As An Exemplar For The Use And Regulation Of Plants As Antibiotics., Ciara Ruth Kenny

Theses

An impending post-antibiotic era looms, thus new sources of therapeutic chemical entities are crucial to sustain effective antimicrobial chemotherapy worldwide. Plant natural products are a source of accessible, structurally diverse compounds that provide therapeutic potential. The pharmacological applications of plants in medicine can be guided by the attestation of traditional use or the application of this knowledge to uncover new leads in the drug discovery process. The range of modified in vitro methods commonly used to investigate preclinical antimicrobial efficacy of plant-derived natural products, and the associated limitations and challenges in the provision of new antimicrobial drugs from plants is …