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A Molecular Ecological Survey Of Tick (Ixodes Scapularis) Population Density And Their Infection Rates With Borrelia Burgdorferi At The New Jersey School Of Conservation, Nathaly M. Salazar-Vasquez

Theses, Dissertations and Culminating Projects

Studying vector populations of the Ixodes scapularis tick is of major importance in New Jersey, an endemic area of Lyme disease. This species of tick is a vector for various disease pathogens including the bacterium that causes Lyme disease, Borrelia burgdorferi. This study focused on Ixodes scapularis tick surveillance at the New Jersey School of Conservation, in Sussex County, New Jersey. Collection of host-seeking ticks began in July 2009 and has continued until December of 2010, by drag-cloth sampling in order to monitor tick abundances of all life-cycle stages.

In 2010 relative abundances for larvae and nymphal stages declined as …

Evolution Through Developmental Changes: How Alterations In Development Cause Evolutionary Changes In Anatomy, Scott F. Gilbert

Biology Faculty Works

No abstract provided.

Research, Monitoring, Assessment And Development Plan 2010 – 2011, Department Of Fisheries

Fisheries Occasional Publications

No abstract provided.

Biology Department Newsletter, No.1, Sacred Heart University

Biology Newsletter

No abstract provided.

Humanized Mouse Models Of Hiv Infection, Paul W. Denton, J. Victor Garcia

Biology Faculty Publications

Because of the limited tropism of HIV, in vivo modeling of this virus has been almost exclusively limited to other lentiviruses such as SIV that reproduce many important characteristics of HIV infection. However, there are significant genetic and biological differences among lentiviruses and some HIV-specific interventions are not effective against other lentiviruses in non-human hosts. For these reasons much emphasis has recently been placed on developing alternative animal models that support HIV replication and recapitulate key aspects of HIV infection and pathogenesis in humans. Humanized mice, CD34+ hematopoietic progenitor cell transplanted immunodeficient mice and in particular mice also implanted with …

Comparison Genomics Of Oryza Rufipogon Chromosome Eight Centromere With Other Species Centromeres, Kalyani Ginjupalli

Theses, Dissertations and Culminating Projects

Centromeres are playing a key role in proper segregation of sister chromatids during mitosis and meiosis. At the centromere region in the chromosome, spindle microtubules attached to the kinetochores that direct the chromosome segregation during mitosis and meiosis. Although centromeric function is conserved among different organisms, there is no conservation of centromeric DNA sequences ranging from budding yeast which has a consensus sequence of approximately 125 base pairs (bp) on each chromosome to Caenorhabditis elegans species which has a holocentric centromere that spans the entire chromosome. However, there are some common proteins that form the kinetochore, such as CENH3 and …

Rho Kinase Regulates Basement Membrane Dynamics To Coordinate Salivary Gland Branching Morphogenesis And Tissue Organization, William Patrick Daley

Legacy Theses & Dissertations (2009 - 2024)

Branching morphogenesis is a developmental mechanism utilized by many organs, including the salivary gland, lung, kidney, and mammary gland, to increase the epithelial surface area for secretion or absorption. The embryonic submandibular salivary gland (SMG) is a classic model for studying tissue morphogenesis in three dimensions ex vivo. Salivary gland development requires distinct but overlapping processes: morphogenesis, the actual physical rearrangement of cells into complex three dimensional structures, and cytodifferentiation, the process by which these cells begin to take on their own specialized function. Polarization, or the organization of cells into a cohesive tissue structure, also occurs concurrently during organ …

Biogeographic Consequences Of Historic And Contemporary Climate Change In Boreal Forest Birds, Joel Ralston

Legacy Theses & Dissertations (2009 - 2024)

In this dissertation, I combine ecological niche models (ENMs), which can be extrapolated through time to predict historic and future changes in species distributions, with mitochondrial and nuclear genetic markers to study the biogeographic consequences of historic and contemporary climate change on boreal forest birds, and in particular Blackpoll Warbler.

Creating Rna Aptamers To Modulate Function Of Human Estrogen Receptor Alpha, Daiying Xu

Legacy Theses & Dissertations (2009 - 2024)

ABSTRACT

Distributions And Abundances Of Microstegium Vimineum Along Forest Roadsides At The Grassy Hill Natural Area, Franklin County, Virginia, Gregory D. Turner

Virginia Journal of Science

In summer 2005, plots were surveyed along roads passing through forest habitats at the Grassy Hill Natural Area Preserve in Franklin County, Virginia to assess the distributions and abundances of Microstegium vimineum in transects located at increasing distances away from roadsides into forest interiors. Across plots, Microstegium was encountered almost exclusively in roadside transects, where abundances were relatively high. While forest composition and topographic features were similar across plots, percent canopy cover and leaf litter depth were greater in interior compared to roadside transects due to undisturbed tree canopies and ground cover located in interior plot areas. Results imply that …

Influence Of Vegetation On Sediment Bacterial Community Structure, Microbial Enzyme Activities And Phosphorus Retention In Constructed Freshwater Wetlands, Rani Menon

Electronic Theses and Dissertations

Agricultural activities are major sources of non-point pollutants causing eutrophication. Constructed wetlands are used as a best management practice for sequestration of nutrients from agricultural runoff. This dissertation focuses on the influence of vegetation on bacterial community structure, microbial enzyme activities, and phosphorus retention capacity of constructed wetland systems. A greenhouse experiment was conducted using unvegetated or vegetated mesocosms with Juncus effusus, Carex lurida or Dichanthelium acuminatum var. acuminatum in monoculture or mixed culture.

To study the influence of vegetation on the bacterial community structure and microbial enzyme activities, sediment samples were taken from monoculture mesocosms in the greenhouse. β-1,4-glucosidase, …

Putting The X In Biology: A Review Of The Mathematics Of Life, John Adam

Mathematics & Statistics Faculty Publications

(First Paragraph) Charles Darwin's 1859 work On the Origin of the Species contained no equations. But that does not mean mathematics has no role to play in the science of life; in fact, the field of biomathematics is burgeoning and has been for several decades. Ian Stewart's new book does an admirable job of unfolding the mathematics undergirding so much of the research being carried out today in the many fields that comprise the subject of biology. Stewart sets the context by noting five great revolutions that have changed the way scientists think about life. These five revolutions are: (i) …

Gulf Of Mexico Oil Blowout Increases Risks To Globally Threatened Species, Claudio Campagna, Frederick T. Short, Beth A. Polidoro, Roger Mcmanus, Bruce B. Collette, Nicolas J. Pilcher, Yvonne Sadovy De Mitcheson, Simon N. Stuart, Kent E. Carpenter

Biological Sciences Faculty Publications

Fourteen marine species in the Gulf of Mexico are protected by the US Endangered Species Act, the Marine Mammal Protection Act, and the Migratory Bird Treaty Act. As the British Petroleum oil spill recovery and remediation proceed, species internationally recognized as having an elevated risk of extinction should also receive priority for protection and restoration efforts, whether or not they have specific legal protection. Forty additional marine species-unprotected by any federal laws-occur in the Gulf and are listed as threatened on the International Union for Conservation of Nature's (IUCN) Red List. The Red List assessment process scientifically evaluates species' global …

Biology, Ecology And Control Of The Invasive Channeled Apple Snail, Pomacea Canaliculata, Christina M. Trexler

Electronic Theses and Dissertations

Invasive species are detrimental to native biotas worldwide. Recently, Florida was invaded by a freshwater snail (Pomacea canaliculata) native to Argentina. This snail is a serious pest of rice crops in Asia, but little is known about its interactions within Florida ecosystems. Possible competitive exclusion of the native congener (P. paludosa) is a concern because it is the almost exclusive prey of the federally endangered Everglades snail kite (Rostrhamus sociabilis). My research consisted of three parts. First, to identify possible methods to control P. canaliculata in the egg stage, I experimentally evaluated the effects of photoperiod, substrate availability, and food …

Variability Of Carbon Stock In Florida Flatwoods Ecosystems Undergoing Restoration And Management, Kathryn Elizabeth Becker

Electronic Theses and Dissertations

The global community is struggling with mitigating the effects of widespread habitat loss and degradation; the effects of which are being further magnified in the face of global climate change. Quality natural habitat is becoming increasingly limited and atmospheric carbon levels continue to rise. Therefore, land managers responsible for multiuse management are often faced with the dilemma of managing ecosystems for biodiversity, as well as optimizing ecosystem services such as carbon storage and sequestration. However, some management techniques used to meet these objectives may yield conflicting results, specifically, the management tool of prescribed fire. Fire is crucial in maintaining species …

Applications Of Airborne And Portable Lidar In The Structural Determination, Management, And Conservation Of Southeastern U.S. Pine Forests, Claudia De Mendonca Costa Synek Listopad

Electronic Theses and Dissertations

Active remote sensing techniques, such as Light Detection and Ranging (LiDAR), have transformed the field of forestry and natural resource management in the last decade. Intensive assessments of forest resources and detailed structural assessments can now be accomplished faster and at multiple landscape scales. The ecological applications of having this valuable information at-hand are still only being developed. This work explores the use of two active remote sensing techniques, airborne and portable LiDAR for forestry applications in a rapidly changing landscape, Southeastern Coastal Pine woodlands. Understanding the strengths and weaknesses of airborne and portable LiDAR, the tools used to extract …

Settlement And Growth Of Quagga Mussels (Dreissenia Rostriformis Bugensis Andrusov, 1897) In Lake Mead, Nevada-Arizona, Usa, Wai Hing Wong, Shawn Gerstenberger, Wen Baldwin, Bryan Moore

Environmental & Global Health Faculty Research

Settlement and growth of quagga mussels Dreissena rostriformis bugensis were monitored in Lake Mead, NV, USA, where the first dreissenid occurrence was confirmed in the western United States. To measure the settlement rate of these invasive mussels, seven acrylonitrile butadiene styrene (ABS) pipes were attached to a line in shallow water (7.7 m below the surface) since November 23, 2007; eight ABS pipes were placed on another line in deep water (13.4 m below the surface) since January 3, 2008. Quagga mussels were sampled from these pipes on March 19, May 21, July 9, October 20, and December 19, 2008. …

Physiological Markers Of Activity-Based Anorexia In Sprague Dawley Rats, Crystal Lange, Michelle Vieyra

Journal of the South Carolina Academy of Science

No abstract provided.

Evolution Of Small Putative Group I Introns In The Ssu Rrna Gene Locus Of Phialophora Species, Scott O. Rogers

Biological Sciences Faculty Publications

Background: Group I introns (specifically subgroup IC1) are common in the nuclear ribosomal RNA genes of fungi. While most range in length from more than 200 to nearly 1800 nucleotides (nt) in length, several small putative (or degenerate) group I introns have been described that are between 56 and 81 nt. Although small, previously we demonstrated that the PaSSU intron in the rRNA small subunit gene of Phialophora americana isolate Wang 1046 is capable of in vitro splicing using a standard group I intron pathway, thus qualifying it as a functional ribozyme. Findings. Here, we describe eight short putative group …

The Characterization Of Genes Involved In Response To The Phenol Derivative And Xenoestrogen Bisphenol-A In Saccharomyces Cerevisiae, Sasha N. Farina

CMC Senior Theses

Bisphenol A is an estrogenic compound that is found in polycarbonate plastics and epoxy resins; humans are continuously exposed to the compound and it is believed to possess the same carcinogenic effects as estrogen (Iso, 2006). In this study, I used Saccharomyces cerevisiae as a model organism to identify mechanisms by which BPA acts based on the genomic profiling of kinase genes from a Mat-α haploid deletion library. Kinases regulate many other proteins, so the identification of a single mutant could identify an entire affected pathway of genes. I conducted a systematic screen of these mutants using the phenotype of …

Molecular, Cellular And Systemic Effects Of Atrazine On The Xenopus Laevis Tadpole, Renee Maryanne Zaya

Dissertations

Atrazine is one of the two most commonly used herbicides in the US and it is the most studies are among the first to link physiological effects of atrazine to changes in tissue and gene expression in Xenopus laevis tadpoles. These studies provide the groundwork for future studies into the mechanisms behind responses to chemical stressors generating data resulting in a better understanding of how these chemicals affect us all. commonly found herbicide in ground water. As a result, a great deal of attention has been placed on its use and safety. It has also been implicated to play a …

Biology News, Winter 2011, University Of Northern Iowa. Department Of Biology.

Biology News

Contents:

-- Greetings from the Department of Biology
-- Focus on UNI Biology Alumni
-- Let us hear from you...
-- Twenty Second North American Prairie Conference: Restoring a National Treasure
-- Faculty and Staff News
-- Summer Research
-- Trip to West Virginia's eastern panhandle was a success
-- Thurman on PDA in Brasil
-- Taiwan Exchange Program
-- Climate change impacts report
-- Focus on UNI Biology Students
-- Student Clubs
-- Pre-Physical Therapy Club
-- Faculty Changes - Retirements
-- You make a difference! Message from our donors
-- Why support undergraduate biological research at UNI
-- …

Morphometric And Genetic Variation Among Populations Of The Southern Short-Tailed Shrew, Blarina Carolinensis, Located Along The Coastal Plain Of Virginia, Devon Kersten

Theses and Dissertations

The distribution of short-tailed shrews, Blarina carolinensis and B. brevicauda, demonstrates contiguous allopatry in peninsular situations in the Coastal Plain of Virginia, and in other areas. The distribution of these two species is unusual in that they do not exhibit syntopy except within a narrow corridor along the borders of their ranges. Interestingly, along the Coastal Plain of Virginia, B. carolinensis is generally found only at the distal ends of the peninsular areas, existing as local populations that appear to be isolated from each other and from the primary population that exists in south-central Virginia. It is thought that the …

Neuroprotective Effects Of A Nicotinic Acetylcholine Receptor Agonist And Modulator In The Rodent Retina, Kazuhiro Iwamoto

Dissertations

The purpose of this dissertation is to assess the potential neuroprotective effect of an alpha7 nAChR agonist, PNU-282987, and modulator, PNU-120596, in an in vitro model of excitotoxicity and an in vivo model of acute glaucoma. In in vitro studies, retinas obtained from Long Evans rats were cultured using various concentrations of the PNU compounds to analyze neuroprotection against glutamate-induced excitotoxicity. After 3 days in culture, RGCs were identified using an antibody against Thy 1.1, visualized using a fluorescent dye and quantified. In culture, glutamate significantly decreased the number of RGCs. However, if either PNU compound was introduced before the …

Anolis Chrysolepis Duméril And Bibron, 1837 (Squamata: Iguanidae), Revisited: Molecular Phylogeny And Taxonomy Of The Anolis Chrysolepis Species Group, Annelise B. D'Angiolella, Tony Gamble, Teresa C. S. Avila-Pires, Guarino R. Colli, Brice P. Noonan, Laurie J. Vitt

Biological Sciences Faculty Research and Publications

The Anolis chrysolepis species group is distributed across the entire Amazon basin and currently consists of A. bombiceps and five subspecies of A. chrysolepis. These lizards are characterized by moderate size, relatively narrow digital pads, and a small dewlap that does not reach the axilla. We used the mitochondrial gene ND2 to estimate phylogenetic relationships among putative subspecies of A. chrysolepis and taxa previously hypothesized to be their close relatives. We also assessed the congruence between molecular and morphological datasets to evaluate the taxonomic status of group members. On the basis of the two datasets, we present a new …

Flowering Phenology Change And Climate Warming In Southwestern Ohio, Ryan Mcewan, Robert J. Brecha, Donald R. Geiger, Grace P. John

Biology Faculty Publications

Global surface temperature has increased markedly over the last 100 years. This increase has a variety of implications for human societies, and for ecological systems. One of the most obvious ways ecosystems are affected by global climate change is through alteration of organisms’ developmental timing (phenology). We used annual botanical surveys that documented the first flowering for an array of species from 1976 to 2003 to examine the potential implications of climate change for plant development. The overall trend for these species was a progressively earlier flowering time. The two earliest flowering taxa (Galanthus and Crocus) also exhibited the strongest …

Expression And Characterization Of The Bacterial Mechanosensitive Channel Mscs In Xenopus Laevis Oocytes., Elizabeth S. Haswell, Grigory Maksaev

Biology Faculty Research

We have successfully expressed and characterized mechanosensitive channel of small conductance (MscS) from Escherichia coli in oocytes of the African clawed frog, Xenopus laevis. MscS expressed in oocytes has the same single-channel conductance and voltage dependence as the channel in its native environment. Two hallmarks of MscS activity, the presence of conducting substates at high potentials and reversible adaptation to a sustained stimulus, are also exhibited by oocyte-expressed MscS. In addition to its ease of use, the oocyte system allows the user to work with relatively large patches, which could be an advantage for the visualization of membrane deformation. …

Myosin Vi Regulates Actin Structure Specialization Through Conserved Cargo-Binding Domain Sites, Mamiko Isaji, Marta Lenartowska, Tatsuhiko Noguchi, Deborah J. Frank, Kathryn G. Miller

Biology Faculty Research

Actin structures are often stable, remaining unchanged in organization for the lifetime of a differentiated cell. Little is known about stable actin structure formation, organization, or maintenance. During Drosophila spermatid individualization, long-lived actin cones mediate cellular remodeling. Myosin VI is necessary for building the dense meshwork at the cones' fronts. We test several ideas for myosin VI's mechanism of action using domain deletions or site-specific mutations of myosin VI. The head (motor) and globular tail (cargo-binding) domains were both needed for localization at the cone front and dense meshwork formation. Several conserved partner-binding sites in the globular tail previously identified …

Will The Use Of Less Fecund Cultivars Reduce The Invasiveness Of Perennial Plants?, Tiffany M. Knight, Kayri Havens, Pati Vitt

Biology Faculty Research

Many invasive species were originally introduced for horticultural purposes, and several continue to be profitable for the green (nursery, horticulture, and landscape) industry. Recently, some plant suppliers have marketed less fecund cultivars of several invasive species, including glossy buckthorn (Frangula alnus), burning bush (Euonymus alatus), and Japanese barberry (Berberis thunbergii), as “safe” alternatives to invasive relatives. We use published matrix population models to simulate the effect of reducing fecundity on the population growth rates of invasive species. We show that large changes in fecundity result in relatively small changes to the population growth rates of long-lived species, which suggests that …

Mechanosensitive Channels: What Can They Do And How Do They Do It?, Elizabeth S. Haswell, Rob Phillips, Douglas C. Rees

Biology Faculty Research

While mechanobiological processes employ diverse mechanisms, at their heart are force-induced perturbations in the structure and dynamics of molecules capable of triggering subsequent events. Among the best characterized force-sensing systems are bacterial mechanosensitive channels. These channels reflect an intimate coupling of protein conformation with the mechanics of the surrounding membrane; the membrane serves as an adaptable sensor that responds to an input of applied force and converts it into an output signal, interpreted for the cell by mechanosensitive channels. The cell can exploit this information in a number of ways: ensuring cellular viability in the presence of osmotic stress and …