Physics Commons^™

Investigation Of Membrane Protein Dynamics Using Correlative Single-Particle Tracking And Super-Resolution Microscopy Combined With Bayesian Inference Of Diusion In Arbitrary Landscapes, Hanieh Mazloom Farsibaf

Physics & Astronomy ETDs

Many experiments have shown that the diffusive motion of lipids and membrane proteins are slower on the cell surface than those in artificial lipid bilayers or blebs. One hypothesis that may partially explain this mystery is the effect of the cytoskeleton structures on the protein dynamics. To test this hypothesis, we designed a high-speed single particle tracking microscope and use a hybrid tracking and super-resolution approach on the same cell. We labeled the high-affinity FceRI receptor as a transmembrane protein and GPI-anchored proteins as an example of outer leaflet protein in Rat Basophilic Leukemia (RBL) cells and tracked these membrane …

Coulombic And Non-Coulombic Effects Of Single And Overlapping Electric Double Layers With Surface Charge Regulation, Raviteja Vangara

Chemical and Biological Engineering ETDs

The physical origin of charged interfaces involving electrolyte solutions is in the thermodynamic equilibrium between the surface reactive groups and certain dissolved ionic species in the bulk. This equilibrium is very strongly dependent on the precise local density of these species, also known as potential determining ions in the solution. The latter, however, is determined by the overall solution structure, which is dominated by the large number of solvent molecules relative to all solutes. Hence, the solvent contribution to the molecular structure is a crucial factor that determines the properties of electric double layers. Models that explicitly account for the …

Direct Observation Of Atomic Exchange During Surface Self-Diffusion, Matthew Aaron Koppa

Physics & Astronomy ETDs

The diffusion of adatoms across the (100) plane of iridium has been previously inferred to occur by an exchange mechanism based on site mapping. This study provides the first direct observation that surface self-diffusion can occur by exchange. Iridium enriched to ≥93% ¹⁹¹Ir was deposited onto an atomically clean and smooth Ir(100) plane as observed in an atom probe field ion microscope. Following thermally activated surface self-diffusion the adatom was field desorbed and mass analyzed. Observation of the ¹⁹³Ir isotope in one-half of the cases demonstrates conclusively that atomic exchange can occur during surface self-diffusion.

Dark Matter Production Beyond The Thermal Wimp Paradigm: An Exploration Of Early Matter Domination Scenarios, Jacek Ksawery Osinski

Physics & Astronomy ETDs

In the standard thermal history of the Universe, the energy density is dominated by radiation throughout the postinflationary era, until matter-radiation equality after big bang nucleosynthesis (BBN). However, we currently do not have any observational probes of the pre-BBN period, and radiation domination (RD) is therefore an assumption. Generic early Universe models predict the presence of additional components in the postinflationary Universe which can lead to periods of nonstandard evolution before the onset of BBN. A prominent example of such a period is a phase of early matter domination (EMD) in which the Universe undergoes matter-dominated expansion for a time, …

Using Natural Phenomena To Study The Ionosphere, Joseph Benjamin Malins

Physics & Astronomy ETDs

This dissertation explores novel techniques for observing the ionosphere using natural signals. The ionosphere is a region of plasma hundreds of kilometers above the Earth that affects communication and remote sensing applications across the world. Traditional techniques for observing the ionosphere involve using man made radio signals, either to reflect the signal at HF frequencies or to pass several signals through the ionosphere and compare the difference the ionosphere makes in the signals. However, such techniques are limited by the ability of equipment to produce these signals and by the numerous laws and regulations governing transmission of signals in the …

Integrated Chirped-Grating Spectrometer-On-A-Chip, Shima Nezhadbadeh

Optical Science and Engineering ETDs

In this dissertation we demonstrate a new structure based on waveguide coupling atop a silicon wafer using a chirped grating to provide the dispersion that leads to a high-resolution, compact, fully integrable and CMOS-compatible spectrometer. Light is both analyzed and detected in a single, completely monolithic component which enables realizing a high-resolution portable spectrometer with an extremely compact footprint. The structure is comprised of a SiO₂/Si₃N₄/SiO₂ waveguide on top of a silicon wafer. Grating regions are fabricated on the top cladding of the waveguide. The input light is incident on a chirped grating …

Near-Field And Far-Field Microscopic And Spectroscopic Characterizations Of Coupled Plasmonic, Excitonic And Polymeric Materials, Chih-Feng Wang

Optical Science and Engineering ETDs

The properties of localized surface plasmons (LSP) have been broadly utilized for chemical sensing, surface enhanced Raman spectroscopy, biomedical imaging and photothermal treatments. By exploiting well-established plasmonic effects, the spectroscopic investigation of intriguing quantum phenomena, such as excitonic interband and intersubband (ISB) transitions in semiconductor heterostructures, was examined and extended in both far- and near-field optical measurements. For far-field characterization, we used colloidal plasmonic Au nanorods (AuNRs) to increase the quantum efficiency of InGaAs/GaAs single quantum well. By analyzing the temperature-dependent photoluminescence enhancement as a function of GaAs capping layer thickness, we attributed the mechanism of the LSP enhancement to …

Electromagnetic Analysis Of Bidirectional Reflectance From Roughened Surfaces And Applications To Surface Shape Recovery, Julian Antolin Camarena

Physics & Astronomy ETDs

Scattering from randomly rough surfaces is a well-established sub area of electrodynamics. There remains much to be done since each surface and optical processes that may occur in within the scattering medium, and countless other scenarios, is different. There are also illumination models that describe lighting in a scene on the macroscopic scale where geometrical optics can be considered adequate. Of particular interest for us is the intersection of the physical scattering theories and the illumination models. We present two contributions: 1) A minimum of two independent images are needed since any opaque surface can be uniquely specified in terms …

Experimental Testing Of A 3d-Printed Metamaterial Slow Wave Structure For High Power Microwave Generation, Antonio B. De Alleluia

Electrical and Computer Engineering ETDs

A metamaterial (MTM) high power microwave (HPM) vacuum electron device (VED) was developed using 3D printing technology. The specific geometric pattern of the source can produce both negative permittivity and permeability to interact with a relativistic electron beam. The electron beam is generated using a pulsed electron accelerator with a maximum energy of 700 keV and lasting approximately 16 ns. The design of this novel VED consists of a circular waveguide loaded with complementary split-ring resonators in a linear periodic arrangement in which the relativistic beam travels guided by a magnetic field. The electrons interact with the MTM producing electromagnetic …

From Cymatics To Sound Therapy: Their Role In Spirituality And Consciousness Research, Victor Christianto, Kasan Susilo, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

Sound is one of the types of waves that can be felt by the sense of hearing (ears). In physics, the definition of sound is something that is produced from objects that vibrate. Objects that produce sound are called sound sources. The sound source that vibrates will vibrate the molecules into the air around it. Sound is mechanical compression or longitudinal waves that propagate through the medium. This medium or intermediate agent can be liquid, solid, gas. So, sound waves can propagate for example in water, coal, or air. Most sounds are a combination of various vibratory signals composed of …

A Remark On How A Consciousness Model And Entanglement Can Lead Us To Quantum Communication, Victor Christianto, Robert N. Boyd, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

In a recent paper, we describe how a model of quantum communication based on combining consciousness experiment and entanglement can serve as impetus to stop 5G-caused diseases. Therefore, in this paper we will discuss how entanglement can be explained in terms of quantum theory. This short review may be considered as an effort to bring QM into real problem solving, i.e. telecommunication.

On Three Possible Applications Of Neutrosophic Logic In Applied Sciences, Including Matter Creation, Victor Christianto, Robert N. Boyd, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

In the same spirit with the theme of last issue of this SGJ journal (“Ongoing creation”), this paper shortly reviews a plausible mechanism from Aether to become ordinary matter from the perspective of Neutrosophic Logic. We also discuss two other possible applications of Neutrosophic Logic, including a resolution of conflicting paradigms in medicine. We hope that some ideas as outlined herein will be proved useful in the near future.

On Cellular Automata Representation Of Submicroscopic Physics: From Static Space To Zuse’S Calculating Space Hypothesis, Victor Christianto, Volodymyr Krasnoholovets, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

In some recent papers (G. ‘t Hooft and others), it has been argued that quantum mechanics can arise from classical cellular automata. Nonetheless, G. Shpenkov has proved that the classical wave equation makes it possible to derive a periodic table of elements, which is very close to Mendeleyev’s one, and describe also other phenomena related to the structure of molecules. Hence the classical wave equation complements Schrödinger’s equation, which implies the appearance of a cellular automaton molecular model starting from classical wave equation. The other studies show that the microworld is constituted as a tessellation of primary topological balls. The …

A Harmless Wireless Quantum Alternative To Cell Phones Based On Quantum Noise, Florentin Smarandache, Robert Neil Boyd, Victor Christianto

Branch Mathematics and Statistics Faculty and Staff Publications

In the meantime we know that 4G and 5G technologies cause many harms to human health. Therefore, here we submit a harmless wireless quantum alternative to cell phones. It is our hope that this alternative

“A Thousand Words”: How Shannon Entropy Perspective Provides Link Among Exponential Data Growth, Average Temperature Of The Earth, Declining Earth Magnetic Field, And Global Consciousness, Victor Christianto, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

The sunspot data seems to indicate that the Sun is likely to enter Maunder Minimum, then it will mean that low Sun activity may cause low temperature in Earth. If this happens then it will cause a phenomenon which is called by some climatology experts as “The Little Ice Age” for the next 20-30 years, starting from the next few years. Therefore, the Earth climate in the coming years tend to be cooler than before. This phenomenon then causes us to ask: what can we do as human being in Earth to postpone or avoid the worsening situation in terms …

Tailored Frequency Comb Structures And Their Sensing Applications, James Hendrie

Optical Science and Engineering ETDs

The focus of this dissertation is the development and investigation of nested cavity mode-locked lasers and their resultant tailored frequency combs. A nested cavity is made up of two cavities, known as parents. One parent is a larger, active, 100MHz Ti:Saph oscillator and the other is a smaller, passive, 7GHz Fabry-Perot Etalon (FPE). Unlike standard frequency combs that are continuous, a tailored comb’s teeth are distributed in equally spaced groups where the center of each group corresponds to the resonance of the FPE and the side bands are determined by the resonances of the Ti:Saph. This unique coupling of the …

The Production Cross Section Of The J/Ψ Meson Measured Using The Phenix Detector At √ S =510 Gev, Katherine Marie Deblasio

Physics & Astronomy ETDs

The inclusive differential production cross section of the J/ψ meson is measured with the PHENIX detector for p + p collisions at √ s = 510 GeV using the 2013 RHIC dataset. The measurement is performed using the dimuon decay channel at forward and backward rapidity ranges of 1.2 < |y| < 2.2 and for transverse momenta up to 12 GeV/c. The experimental results are compared to current predictions in NRQCD and serves to shed light on the ambiguity of the J/ψ production mechanism. The 2013 RHIC dataset provides unique challenges to the cross section measurement due to the effects of detector pile-up from multiple collisions. Techniques to quantify these effects are discussed.

Quantum Algorithms With Applications To Simulating Physical Systems, Anirban Ch Narayan Chowdhury

Physics & Astronomy ETDs

The simulation of quantum physical systems is expected to be an important application for quantum computers. The work presented in this dissertation aims to improve the resource requirements of quantum computers for solving simulation problems, by providing both novel quantum algorithms and improved implementations of existing ones. I present three main results that cover diverse aspects of simulation including equilibrium physics, the preparation of useful quantum states, and simulations based on classical stochastic processes. The results rely on established quantum algorithms and other recent techniques which I review. My first original contribution is a new quantum algorithm to sample from …

Studying The Properties Of Sf6 Gas Mixtures For Directional Dark Matter Detection, Randy J. Lafler

Physics & Astronomy ETDs

Although dark matter comprises approximately 85\% of the matter content of the universe, direct detection of dark matter remains elusive. As the available parameter space for dark matter candidates is pushed to lower and lower limits, the demand for larger, more sensitive detectors continues to grow. Although upscaling the detector improves the sensitivity, it greatly increases the cost and complexity of the experiment. Even after a dark matter signal is detected, there remains the possibility that an unknown background mimics the dark matter signal. Consequently, verifying the dark matter origin of a detection signal is an issue for any dark …

Searching For Supermassive Binary Black Holes And Their Gravitational Waves, Karishma Bansal

Physics & Astronomy ETDs

The recent discovery of gravitational waves (GWs) by the LIGO collaboration has opened a new observing window on the universe, but it is limited to the GWs in the frequency range of 10-1000 Hz. The main motivation of this thesis is to consider the possibility of detecting low frequency (nHz) GWs. In the pursuit of these waves, we need to understand their source of origin and build a detector with the required sensitivity. Low-frequency waves are expected as a result of coalescing binary supermassive black holes (SMBBHs). We hope to detect these waves in the near future using pulsar timing …

Computational Investigation Of The Interactions Between Bioactive Compounds And Biological Assemblies, Tye D. Martin

Biomedical Engineering ETDs

Small, biologically active molecules with unique properties and applications are potential solutions to a wide range of threats to global health including infectious agents and neurodegenerative disease. Experimental studies on a class of oligomeric p-phenylene ethynylenes (OPEs) have shown potential both as bioactive antimicrobials and fluorescent sensing agents for tracking amyloid-β (Aβ) aggregates found in Alzheimer’s Disease (AD). A second type of small molecule with potential applications in AD therapy, curcumin, has been found to interfere with Aβ fibril growth. Curcumin also attenuates Aβ-membrane interactions and Aβ toxicity. Our goal has been to use computational techniques to better understand the …

Characterization Of Single- And Multi-Phase Shock-Accelerated Flows, Patrick John Wayne

Mechanical Engineering ETDs

Experiments conducted in the Shock Tube Facility at the University of New Mexico are focused on characterization of shock-accelerated flows. Single-phase (gaseous) initial conditions consist of a heavy gas column of sulfur hexafluoride seeded with approximately 11% acetone gas by mass. Visualization of the image plane for gaseous initial conditions is accomplished via planar laser-induced fluorescence (PLIF) with a high-powered Nd:YAG ultraviolet laser and an Apogee Alta U-42 monochrome CCD camera, with a quantum efficiency > 90%. Multi-phase (gas-solid) initial conditions consist of glass micro-beads deposited on small 1-cm diameter discs of specific surface chemistry, mounted flush with the bottom wall …

Circumstellar Sio Masers In The Bulge Asymmetries And Dynamical Evolution Survey, Michael Cullen Stroh

Physics & Astronomy ETDs

The Bulge Asymmetries and Dynamical Evolution (BAaDE) project aims to explore the complex structure of the inner Galaxy and Galactic Bulge, by using the 43 GHz receivers at the Karl G. Jansky Very Large Array (VLA) and the 86 GHz receivers at the Atacama Large Millimeter/submillimeter Array (ALMA) to observe SiO maser lines in red giant stars. The SiO maser transitions occur at radio frequencies, where extinction is negligible, thus allowing a dense sampling of line-of-sight velocities in the most crowded regions of the Milky Way.

The overall goal of this thesis is to characterize the SiO masers in the …

Symmetry And Dopant Diffusion In Inverted Nanopyramid Arrays For Thin Crystalline Silicon Solar Cells, Seok Jun Han

Chemical and Biological Engineering ETDs

In this dissertation, we enhance the efficiency of thin flexible monocrystalline silicon solar cells by breaking symmetry in light trapping nanostructures and improving homogeneity in dopant concentration profile. These thin cells are potentially less expensive than conventional thick silicon cells by using less silicon material and making the cells more convenient to be handled when supported on polymer films. Moreover, these cells are widely applicable due to their flexibility and lightweight. However, for high efficiencies, these cells require effective light trapping and charge collection. We achieve these in cells based on 14-mm-thick free-standing silicon films with light-trapping arrays of nanopyramidal …

Multifunctional Properties Of Gan Nws Applied To Nanometrology, Nanophotonics, And Scanning Probe Microscopy/Lithography, Mahmoud Behzadirad

Optical Science and Engineering ETDs

GaN nanowires are promising for optical and optoelectronic applications because of their waveguiding properties and large optical bandgap. Recent researches have shown superior mechanical properties of GaN nanowires which promises their use in new research areas e.g. nanometrology. In this work, we develop a scalable two-step top-down approach using interferometric lithography as well a bottom-up growth of NWs using MOCVD, to manufacture highly-ordered arrays of nanowires with atomic surface roughness and desired aspect-ratios to be used in nanophotonics and atomic precision metrology and lithography. Using this method, uniform nanowire arrays were achieved over large-areas (~1 mm²) with aspect-ratio …

Fluid Transport In Porous Media For Engineering Applications, Eric M. Benner

Chemical and Biological Engineering ETDs

This doctoral dissertation presents three topics in modeling fluid transport through porous media used in engineering applications. The results provide insights into the design of fuel cell components, catalyst and drug delivery particles, and aluminum- based materials. Analytical and computational methods are utilized for the modeling of the systems of interest. Theoretical analysis of capillary-driven transport in porous media show that both geometric and evaporation effects significantly change the time dependent behavior of liquid imbibition and give a steady state flux into the medium. The evaporation–capillary number is significant in determining the time-dependent behavior of capillary flows in porous media. …

Topics In Three-Dimensional Imaging, Source Localization And Super-Resolution, Zhixian Yu

Physics & Astronomy ETDs

The realization that twisted light beams with helical phasefronts could carry orbital angular momentum (OAM) that is in excess of the photon's spin angular momentum (SAM) has spawned various important applications. One example is the design of novel imaging systems that achieve three-dimensional (3D) imaging in a single snapshot via the rotation of point spread function (PSF).

Based on a scalar-field analysis, a particular simple version of rotating PSF imagery, which was proposed by my advisor Dr. Prasad, furnishes a practical approach to perform 3D source localization using a spiral phase mask that generates a combination of Bessel vortex beams. …

Generation And Use Of Femtosecond, Gigawatt, Near Infrared Laser Pulses From An Amplified, Mode-Locked, Ti:Sapphire Laser, David Anthony Valdés

Optical Science and Engineering ETDs

This work modeled the early to middle successes achieved in the field of ultrafast, high peak power optics, beginning with the work of Nobel Prize winners Donna Strickland and Gérard Mourou in 1985. In our work, 100 fs light pulses of around 800 nm were generated by a Ti:Sapphire oscillator, then amplified to approximately 30 GW peak power using a chirped pulse amplification system that included regenerative and multi-pass amplifiers. As a verification of our pulses having high peak powers and ultrashort durations, they were then used to strike water, glass, and a Kerr Cell. Supercontinuum generation was observed as …

Studies On The Generation And Detection Of Orbital Angular Momentum Based On Beam-Shaping Techniques, Xijie Luo

Physics & Astronomy ETDs

Light carrying orbital angular momentum (OAM) has many applications ranging from optical manipulation, imaging and remote sensing, and optical communications, and can be used to perform fundamental studies in quantum mechanics and quantum information. Moreover, single photons with high-order OAM allow for increasing the amount of information carried per photon in quantum communication. This thesis describes the study of methods for the preparation and detection of OAM of light in high mode order by utilizing beam shaping techniques using spatial light modulators (SLMs). The quality of the generated high-order OAM mode is limited by optical aberrations which are induced by …

Direct Detection Of Relic Neutrino Background Remains Impossible: A Review Of More Recent Arguments, Victor Christianto, Florentin Smarandache

Branch Mathematics and Statistics Faculty and Staff Publications

The existence of big bang relic neutrinos—exact analogues of the big bang relic photons comprising the cosmic microwave background radiation—is a basic prediction of standard cosmology. The standard big bang theory predicts the existence of 1087 neutrinos per flavour in the visible universe. This is an enormous abundance unrivalled by any other known form of matter, falling second only to the cosmic microwave background (CMB) photon. Yet, unlike the CMB photon which boasts its first (serendipitous) detection in the 1960s and which has since been observed and its properties measured to a high degree of accuracy in a series of …