Physics Commons^™

Evaluation Of An End-To-End Radiotherapy Treatment Planning Pipeline For Prostate Cancer, Mohammad Daniel El Basha, Court Laurence, Carlos Eduardo Cardenas, Julianne Pollard-Larkin, Steven Frank, David T. Fuentes, Falk Poenisch, Zhiqian H. Yu

Dissertations & Theses (Open Access)

Radiation treatment planning is a crucial and time-intensive process in radiation therapy. This planning involves carefully designing a treatment regimen tailored to a patient’s specific condition, including the type, location, and size of the tumor with reference to surrounding healthy tissues. For prostate cancer, this tumor may be either local, locally advanced with extracapsular involvement, or extend into the pelvic lymph node chain. Automating essential parts of this process would allow for the rapid development of effective treatment plans and better plan optimization to enhance tumor control for better outcomes.

The first objective of this work, to automate the treatment …

Improving The Scalability Of Neural Network Surface Code Decoders, Kevin Wu

Undergraduate Honors Theses

Quantum computers have recently gained significant recognition due to their ability to solve problems intractable to classical computers. However, due to difficulties in building actual quantum computers, they have large error rates. Thus, advancements in quantum error correction are urgently needed to improve both their reliability and scalability. Here, we first present a type of topological quantum error correction code called the surface code, and we discuss recent developments and challenges of creating neural network decoders for surface codes. In particular, the amount of training data needed to reach the performance of algorithmic decoders grows exponentially with the size of …

Particle Classification Of Electromagnetic Clusters Using The Sphenix Detector, Fredrick J. Melhorn

Chancellor’s Honors Program Projects

No abstract provided.

Accelerating Markov Chain Monte Carlo Sampling With Diffusion Models, N. T. Hunt-Smith, W. Melnitchouk, F. Ringer, N. Sato, A. W. Thomas, M. J. White

Physics Faculty Publications

Global fits of physics models require efficient methods for exploring high-dimensional and/or multimodal posterior functions. We introduce a novel method for accelerating Markov Chain Monte Carlo (MCMC) sampling by pairing a Metropolis-Hastings algorithm with a diffusion model that can draw global samples with the aim of approximating the posterior. We briefly review diffusion models in the context of image synthesis before providing a streamlined diffusion model tailored towards low-dimensional data arrays. We then present our adapted Metropolis-Hastings algorithm which combines local proposals with global proposals taken from a diffusion model that is regularly trained on the samples produced during the …

Cross-Layer Design Of Highly Scalable And Energy-Efficient Ai Accelerator Systems Using Photonic Integrated Circuits, Sairam Sri Vatsavai

Theses and Dissertations--Electrical and Computer Engineering

Artificial Intelligence (AI) has experienced remarkable success in recent years, solving complex computational problems across various domains, including computer vision, natural language processing, and pattern recognition. Much of this success can be attributed to the advancements in deep learning algorithms and models, particularly Artificial Neural Networks (ANNs). In recent times, deep ANNs have achieved unprecedented levels of accuracy, surpassing human capabilities in some cases. However, these deep ANN models come at a significant computational cost, with billions to trillions of parameters. Recent trends indicate that the number of parameters per ANN model will continue to grow exponentially in the foreseeable …

Reducing Food Scarcity: The Benefits Of Urban Farming, S.A. Claudell, Emilio Mejia

Journal of Nonprofit Innovation

Urban farming can enhance the lives of communities and help reduce food scarcity. This paper presents a conceptual prototype of an efficient urban farming community that can be scaled for a single apartment building or an entire community across all global geoeconomics regions, including densely populated cities and rural, developing towns and communities. When deployed in coordination with smart crop choices, local farm support, and efficient transportation then the result isn’t just sustainability, but also increasing fresh produce accessibility, optimizing nutritional value, eliminating the use of ‘forever chemicals’, reducing transportation costs, and fostering global environmental benefits.

Imagine Doris, who is …

Generative Adversarial Game With Tailored Quantum Feature Maps For Enhanced Classification, Anais Sandra Nguemto Guiawa

Doctoral Dissertations

In the burgeoning field of quantum machine learning, the fusion of quantum computing and machine learning methodologies has sparked immense interest, particularly with the emergence of noisy intermediate-scale quantum (NISQ) devices. These devices hold the promise of achieving quantum advantage, but they grapple with limitations like constrained qubit counts, limited connectivity, operational noise, and a restricted set of operations. These challenges necessitate a strategic and deliberate approach to crafting effective quantum machine learning algorithms.

This dissertation revolves around an exploration of these challenges, presenting innovative strategies that tailor quantum algorithms and processes to seamlessly integrate with commercial quantum platforms. A …

Faster, Cheaper, And Better Cfd: A Case For Machine Learning To Augment Reynolds-Averaged Navier-Stokes, John Peter Romano Ii

Mechanical & Aerospace Engineering Theses & Dissertations

In recent years, the field of machine learning (ML) has made significant advances, particularly through applying deep learning (DL) algorithms and artificial intelligence (AI). The literature shows several ways that ML may enhance the power of computational fluid dynamics (CFD) to improve its solution accuracy, reduce the needed computational resources and reduce overall simulation cost. ML techniques have also expanded the understanding of underlying flow physics and improved data capture from experimental fluid dynamics.

This dissertation presents an in-depth literature review and discusses ways the field of fluid dynamics has leveraged ML modeling to date. The author selects and describes …

Multi-Agent Deep Reinforcement Learning For Radiation Localization, Benjamin Scott Totten

Dissertations and Theses

For the safety of both equipment and human life, it is important to identify the location of orphaned radioactive material as quickly and accurately as possible. There are many factors that make radiation localization a challenging task, such as low gamma radiation signal strength and the need to search in unknown environments without prior information. The inverse-square relationship between the intensity of radiation and the source location, the probabilistic nature of nuclear decay and gamma ray detection, and the pervasive presence of naturally occurring environmental radiation complicates localization tasks. The presence of obstructions in complex environments can further attenuate the …

Inverse Mappers For Qcd Global Analysis, Manal Almaeen

Computer Science Theses & Dissertations

Inverse problems – using measured observations to determine unknown parameters – are well motivated but challenging in many scientific problems. Mapping parameters to observables is a well-posed problem with unique solutions, and therefore can be solved with differential equations or linear algebra solvers. However, the inverse problem requires backward mapping from observable to parameter space, which is often nonunique. Consequently, solving inverse problems is ill-posed and a far more challenging computational problem.

Our motivated application in this dissertation is the inverse problems in nuclear physics that characterize the internal structure of the hadrons. We first present a machine learning framework …

Using Deep Neural Networks To Classify Astronomical Images, Andrew D. Macpherson

Honors Projects

As the quantity of astronomical data available continues to exceed the resources available for analysis, recent advances in artificial intelligence encourage the development of automated classification tools. This paper lays out a framework for constructing a deep neural network capable of classifying individual astronomical images by describing techniques to extract and label these objects from large images.

U-No: U-Shaped Neural Operators, Md Ashiqur Rahman, Zachary E Ross, Kamyar Azizzadenesheli

Department of Computer Science Faculty Publications

Neural operators generalize classical neural networks to maps between infinite-dimensional spaces, e.g., function spaces. Prior works on neural operators proposed a series of novel methods to learn such maps and demonstrated unprecedented success in learning solution operators of partial differential equations. Due to their close proximity to fully connected architectures, these models mainly suffer from high memory usage and are generally limited to shallow deep learning models. In this paper, we propose U-shaped Neural Operator (U-NO), a U-shaped memory enhanced architecture that allows for deeper neural operators. U-NOs exploit the problem structures in function predictions and demonstrate fast training, data …

Machine Learning-Based Data And Model Driven Bayesian Uncertanity Quantification Of Inverse Problems For Suspended Non-Structural System, Zhiyuan Qin

All Dissertations

Inverse problems involve extracting the internal structure of a physical system from noisy measurement data. In many fields, the Bayesian inference is used to address the ill-conditioned nature of the inverse problem by incorporating prior information through an initial distribution. In the nonparametric Bayesian framework, surrogate models such as Gaussian Processes or Deep Neural Networks are used as flexible and effective probabilistic modeling tools to overcome the high-dimensional curse and reduce computational costs. In practical systems and computer models, uncertainties can be addressed through parameter calibration, sensitivity analysis, and uncertainty quantification, leading to improved reliability and robustness of decision and …

Characterization Of 2d Quantum Materials Using Ai And Large-Scale Quantum Data Collection, Apoorva Bisht

Computer Science and Computer Engineering Undergraduate Honors Theses

2D materials like hexagonal boron nitride, graphene, and tungsten diselenide are widely utilized for studying their unique mechanical and opto-electronic properties to exploit them to make transistors and fabricating a variety of other devices. All these applications require that the 2D materials used be of specific uniform thickness. Until very recently, this process has been largely manual and tedious. However, few applications exploit the characteristic color-to-thickness correspondence of these near-transparent materials. To continue this effort, in this work we create a large-scale dataset for three different materials (hBN, graphene, and WSe$_2$) to train and test an image segmentation model along …

Modeling, Simulation And Control Of Microrobots For The Microfactory., Zhong Yang

Electronic Theses and Dissertations

Future assembly technologies will involve higher levels of automation in order to satisfy increased microscale or nanoscale precision requirements. Traditionally, assembly using a top-down robotic approach has been well-studied and applied to the microelectronics and MEMS industries, but less so in nanotechnology. With the boom of nanotechnology since the 1990s, newly designed products with new materials, coatings, and nanoparticles are gradually entering everyone’s lives, while the industry has grown into a billion-dollar volume worldwide. Traditionally, nanotechnology products are assembled using bottom-up methods, such as self-assembly, rather than top-down robotic assembly. This is due to considerations of volume handling of large …

Evaluation Of Scalable Quantum And Classical Machine Learning For Particle Tracking Classification In Nuclear Physics, Polykarpos Thomadakis, Emmanuel Billias, Nikos Chrisochoides

The Graduate School Posters

Future particle accelerators will exceed by far the current data size (10¹⁵) per experiment, and high- luminosity program(s) will produce more than 300 times as much data. Classical Machine Learning (ML) likely will benefit from new tools based on quantum computing. Particle track reconstruction is the most computationally intensive process in nuclear physics experiments. A combinatorial approach exhaustively tests track measurements (“hits”), represented as images, to identify those that form an actual particle trajectory, which is then used to reconstruct track parameters necessary for the physics experiment. Quantum Machine Learning (QML) could improve this process in multiple ways, …

Ml-Based Surrogates And Emulators, Tareq Alghamdi, Yaohang Li, Nobuo Sato

College of Sciences Posters

No abstract provided.

Patch-Wise Training With Convolutional Neural Networks To Synthetically Upscale Cfd Simulations, John P. Romano, Alec C. Brodeur, Oktay Baysal

Mechanical & Aerospace Engineering Faculty Publications

This paper expands the authors’ prior work[1], which focuses on developing a convolutional neural network (CNN) model capable of mapping time-averaged, unsteady Reynold’s-averaged Navier-Stokes (URANS) simulations to higher resolution results informed by time-averaged detached eddy simulations (DES). The authors present improvements over the prior CNN autoencoder model that result from hyperparameter optimization, increased data set augmentation through the adoption of a patch-wise training approach, and the predictions of primitive variables rather than vorticity magnitude. The training of the CNN model developed in this study uses the same URANS and DES simulations of a transonic flow around several NACA 4-digit airfoils …

Nudyclr: Nuclear Dynamic Co-Learned Representations, Víctor Samuel Pérez-Díaz

2023 REYES Proceedings

NuCLR (Nuclear Co-Learned Representations) is a cutting-edge multi-task deep learning framework designed to predict essential nuclear observables, including binding energies, decay energies, and nuclear charge radii. As part of the REYES Mentorship Program, we investigated the application of dynamic loss weighting to further refine NuCLR’s predictive performance. Our findings indicate that while weighting strategies can enhance accuracy in specific tasks, such as binding energy prediction, they may underperform in others. Equal Weighting (EW), the original method employed by NuCLR, demonstrated consistent performance across multiple tasks, affirming its robustness. This report succinctly presents the developments and results of the mentorship program …

Innovations In Drop Shape Analysis Using Deep Learning And Solving The Young-Laplace Equation For An Axisymmetric Pendant Drop, Andres P. Hyer

Theses and Dissertations

Axisymmetric Drop Shape Analysis (ADSA) is a technique commonly used to determine surface or interfacial tension. Applications of traditional ASDA methods to process analytical technologies are limited by computational speed and image quality. Here, we address these limitations using a novel machine learning approach to analysis. With a convolutional neural network (CNN), we were able to achieve an experimental fit precision of (+/-) 0.122 mN/m in predicting the surface tension of drop images at a rate of 1.5 ms^-1 versus 7.7 s^-1, which is more than 5,000 times faster than the traditional method. The results are validated on real images …

Toward A Generative Modeling Analysis Of Clas Exclusive 2𝜋 Photoproduction, T. Alghamdi, Y. Alanazi, M. Battaglieri, Ł. Bibrzycki, A. V. Golda, A. N. Hiller Blin, E. L. Isupov, Y. Li, L. Marsicano, W. Melnitchouk, V. I. Mokeev, G. Montaña, A. Pilloni, N. Sato, A. P. Szczepaniak, T. Vittorini

Computer Science Faculty Publications

AI-supported algorithms, particularly generative models, have been successfully used in a variety of different contexts. This work employs a generative modeling approach to unfold detector effects specifically tailored for exclusive reactions that involve multiparticle final states. Our study demonstrates the preservation of correlations between kinematic variables in a multidimensional phase space. We perform a full closure test on two-pion photoproduction pseudodata generated with a realistic model in the kinematics of the Jefferson Lab CLAS g11 experiment. The overlap of different reaction mechanisms leading to the same final state associated with the CLAS detector’s nontrivial effects represents an ideal test case …

Charged Track Reconstruction With Artificial Intelligence For Clas12, Gagik Gavalian, Polykarpos Thomadakis, Angelos Angelopoulos, Nikos Chrisochoides

Computer Science Faculty Publications

In this paper, we present the results of charged particle track reconstruction in CLAS12 using artificial intelligence. In our approach, we use neural networks working together to identify tracks based on the raw signals in the Drift Chambers. A Convolutional Auto-Encoder is used to de-noise raw data by removing the hits that do not satisfy the patterns for tracks, and second Multi-Layer Perceptron is used to identify tracks from combinations of clusters in the drift chambers. Our method increases the tracking efficiency by 50% for multi-particle final states already conducted experiments. The de-noising results indicate that future experiments can run …

Symbolic Computation Of Squared Amplitudes In High Energy Physics With Machine Learning, Abdulhakim Alnuqaydan

Theses and Dissertations--Physics and Astronomy

The calculation of particle interaction squared amplitudes is a key step in the calculation of cross sections in high-energy physics. These complex calculations are currently performed using domain-specific symbolic algebra tools, where the computational time escalates rapidly with an increase in the number of loops and final state particles. This dissertation introduces an innovative approach: employing a transformer-based sequence-to-sequence model capable of accurately predicting squared amplitudes of Standard Model processes up to one-loop order when trained on symbolic sequence pairs. The primary objective of this work is to significantly reduce the computational time and, more importantly, develop a model that …

Machine Learning Strategies For Potential Development In High-Entropy Driven Nickel-Based Superalloys, Marium Mostafiz Mou

MSU Graduate Theses

In this study, I developed Deep Learning interatomic potentials to model a multi-phase and multi-component system of Ni-based Superalloys. The system has up to three major phase constituents, namely Gamma, Gamma Prime, and Transition-metal rich Carbide. I utilized invariant scalar-based and/or equivariant, tensor-based neural network (NN) approach as implemented in DEEPMD, NEQUIP/ALLEGRO codes, respectively, and Moment Tensor Potential (MTP). For the training and validation sets, I employed the ab-initio molecular dynamics (AIMD) trajectory results and ground state DFT calculations, including the energy, force, and virial database from highly diverse compositions, temperatures, and pressures following a “High Entropy Strategy.” The Deep …

Machine Learning-Based Jet And Event Classification At The Electron-Ion Collider With Applications To Hadron Structure And Spin Physics, Kyle Lee, James Mulligan, Mateusz Płoskoń, Felix Ringer, Feng Yuan

Physics Faculty Publications

We explore machine learning-based jet and event identification at the future Electron-Ion Collider (EIC). We study the effectiveness of machine learning-based classifiers at relatively low EIC energies, focusing on (i) identifying the flavor of the jet and (ii) identifying the underlying hard process of the event. We propose applications of our machine learning-based jet identification in the key research areas at the future EIC and current Relativistic Heavy Ion Collider program, including enhancing constraints on (transverse momentum dependent) parton distribution functions, improving experimental access to transverse spin asymmetries, studying photon structure, and quantifying the modification of hadrons and jets in …

Establishing The Legal Framework To Regulate Quantum Computing Technology, Kaya Derose

Catholic University Journal of Law and Technology

No abstract provided.

The Interaction Of Different Primary Producers And Physical And Chemical Dynamics Of An Urban Shallow Lake, Majid Sahin

Dissertations, Theses, and Capstone Projects

An artificial urban shallow lake, Prospect Park Lake (PPL), is situated on a terminal moraine in Brooklyn New York, and supplied with municipal water treated with ortho-phosphates. The constant input of the phosphate nutrient is the primary source of eutrophication in the lake. The numerous pools along the water course houses various aquatic phototrophs, which influence the water quality and the state of the system, driving conditions into favoring the survival of their species. In the first half of the dissertation, the focus of the project is on analyzing how the different primary producers in different regions of PPL affect …

Development Of Graphical Models And Statistical Physics Motivated Approaches To Genomic Investigations, Yashwanth Lagisetty

Dissertations & Theses (Open Access)

Identifying genes involved in disease pathology has been a goal of genomic research since the early days of the field. However, as technology improves and the body of research grows, we are faced with more questions than answers. Among these is the pressing matter of our incomplete understanding of the genetic underpinnings of complex diseases. Many hypotheses offer explanations as to why direct and independent analyses of variants, as done in genome-wide association studies (GWAS), may not fully elucidate disease genetics. These range from pointing out flaws in statistical testing to invoking the complex dynamics of epigenetic processes. In the …

Computational Models To Detect Radiation In Urban Environments: An Application Of Signal Processing Techniques And Neural Networks To Radiation Data Analysis, Jose Nicolas Gachancipa

Beyond: Undergraduate Research Journal

Radioactive sources, such as uranium-235, are nuclides that emit ionizing radiation, and which can be used to build nuclear weapons. In public areas, the presence of a radioactive nuclide can present a risk to the population, and therefore, it is imperative that threats are identified by radiological search and response teams in a timely and effective manner. In urban environments, such as densely populated cities, radioactive sources may be more difficult to detect, since background radiation produced by surrounding objects and structures (e.g., buildings, cars) can hinder the effective detection of unnatural radioactive material. This article presents a computational model …

Artificial Intelligence, Controls, And Sensor Fusion For Optimization And Modeling Of Space Missions And Particle Accelerators, Reza Pirayeshshirazinezhad

Mechanical Engineering ETDs

This PhD dissertation is devoted to developing artificial intelligence (AI) applications for space missions and particle accelerators considering constraints on the computational resources. The space mission studied in this research, the Virtual Telescope for X-ray Observations (VTXO), is the mission exploiting 2 6U-CubeSats operating in a precision formation. The goal of the VTXO project is to develop a space-based, X-ray imaging telescope with high angular resolution precision. VTXO space mission is designed and the mission is optimized to increase the performance of the mission. Trajectory optimization with AI, hybrid control, control algorithms, and high performance computing are all used to …