Soil Science Commons^™

Ironstone Gravel Types In Western Australia: Re-Purposing A Geological Survey To Improve Soil Management, Edward A. Griffin, Karen Holmes, Tim Overheu

Conference papers and presentations

The deeply laterised landscapes of Western Australia’s wheatbelt contain large amounts of ferruginous concretions or pisoliths, referred to locally as ironstone gravel. Soil surveys over the years have described ironstone gravel presence and abundance, and the state soil classification system recognises their importance in agriculture by designating ‘ironstone gravel soils’ at the highest level of the classification hierarchy. These gravels have generally been assumed inert in agricultural soils; however, farm trials and anecdotal experience suggest they may play a more active role in nutrient and water retention than previously recognised. Gravelly soil performance under dryland agriculture varies dramatically across the …

The Development And Evaluation Of Lecture Tutorials For Introductory Soil Science, Judith K. Turk

Conservation and Survey Division

The wide-array of concepts from the natural sciences that must be mastered to succeed in an introductory soil science course presents a significant challenge to students. This study was conducted to determine if students’ conceptual development regarding topics in introductory soil science could be improved by using lecture tutorials. Lecture tutorials are activities that students complete following a lecture. They guide the students to critically analyze their understanding of a concept presented in the lecture. Eight lecture tutorials were written and evaluated using pre/post quizzes and surveys in two courses (an environmental science program course and a general studies course). …

Adjustment And Optimization Of The Cropping Systems Under Water Constraint, Pingli An, Wei Ren, Xiliin Liu, Mengmei Song, Xuemin Li

Plant and Soil Sciences Faculty Publications

The water constraint on agricultural production receives growing concern with the increasingly sharp contradiction between demand and supply of water resources. How to mitigate and adapt to potential water constraint is one of the key issues for ensuring food security and achieving sustainable agriculture in the context of climate change. It has been suggested that adjustment and optimization of cropping systems could be an effective measure to improve water management and ensure food security. However, a knowledge gap still exists in how to quantify potential water constraint and how to select appropriate cropping systems. Here, we proposed a concept of …

Tungstate (Vi) Sorption On Hematite: An In Situ Atr-Ftir Probe On The Mechanism, Sudipta Rakshit, Bryan Sallman, Athénais Davantés, Grégory Lefèvre

Agricultural and Environmental Sciences Faculty Research

Owing to the suspected toxicity and carcinogenicity of tungstate (VI) oxyanions [i.e. mono tungstate and several polytungstate, generally represented by W (VI)], the environmental fate of W (VI) has been widely studied. Sorption is regarded as a major mechanism by which W (VI) species are retained in the solid/water interface. Iron (hydr)oxides have been considered important environmental sinks for W (VI) species. Here we report sorption mechanisms of W (VI) on a common iron oxide mineral-hematite under environmentally relevant solution properties using in situ attenuated total reflectance Fourier transform infrared (ATR-FTIR) spectroscopic probes. Initial W (VI) loadings varied from 10 …

Silica Uptake And Release In Live And Decaying Biomass In A Northern Hardwood Forest, Wim Clymans, Daniel J. Conley, John J. Battles, Patrick J. Frings, Mary Margaret Koppers, Gene E. Likens, Chris E. Johnson

Civil and Environmental Engineering

In terrestrial ecosystems, a large portion (20–80%) of the dissolved Si (DSi) in soil solution has passed through vegetation. While the importance of this “terrestrial Si filter” is generally accepted, few data exist on the pools and fluxes of Si in forest vegetation and the rate of release of Si from decomposing plant tissues. We quantified the pools and fluxes of Si through vegetation and coarse woody debris (CWD) in a northern hardwood forest ecosystem (Watershed 6, W6) at the Hubbard Brook Experimental Forest (HBEF) in New Hampshire, USA. Previous work suggested that the decomposition of CWD may have significantly …

Identifying Groundwater - Dependent Wetlands Of The Broome Sandstone Aquifer In The La Grange Groundwater Area, Nicholas Wright, Richard J. George Dr, Robert Paul, Paul Raper

Resource management technical reports

This report identifies wetlands that are likely to be dependent on the Broome Sandstone aquifer within the La Grange groundwater allocation area. The Broome Sandstone aquifer is the dominant groundwater resource in the area. With potential agricultural growth of this area, it is necessary to understand, monitor and manage the aquifer and its dependent wetlands. This report describes how we created a watertable surface that was used to identify wetlands and to determine which of the previously mapped wetlands are likely to be sourced from the Broome Sandstone aquifer. A watertable surface was created from 148 points taken from bore …

Identifying Soil Constraints That Limit Wheat Yield In The South-West Of Western Australia, Dennis Van Gool

Resource management technical reports

Wheat is grown on about 18 million hectares in the South-West Agricultural Region of Western Australia from north and east of Geraldton to Esperance in the south-east. Yields are frequently constrained by a range of soil factors.

This report uses existing conventional soil-landscape mapping to analyse the effects of 17 known soil constraints that limit crop production and roughly prioritises the areas where they occur.

Traditional land capability maps are prepared using a most-limiting factor approach, which assumes that ameliorating the most limiting constraint will result in a yield increase until the next most-limiting constraint is reached. Where there are …

Identifying Soil Constraints That Limit Wheat Yield In The South-West Of Western Australia, Dennis Van Gool

Resource management technical reports

This is a novel approach using regional-scale information. The analysis estimated that:

• most of the wheat-growing land in south-west WA has one or more soil constraints
• about 1.6 million hectares (9% of the total area) are not suitable for cropping
• about 2.2 million hectares (12% of the total area) are suitable for cropping but are subject to many (more than 3) constraints; soil amelioration is unlikely to significantly improve profitable yield gain
• subsurface acidity extends over 12.6 million hectares (about 70% of the total area); about 7.6 million hectares of that area (42% of the total area) is estimated to …

Biogeographical Patterns Of Soil Microbial Communities: Ecological, Structural, And Functional Diversity And Their Application To Soil Provenance, Natalie Damaso

FIU Electronic Theses and Dissertations

The current ecological hypothesis states that the soil type (e.g., chemical and physical properties) determines which microbes occupy a particular soil and provides the foundation for soil provenance studies. As human profiles are used to determine a match between evidence from a crime scene and a suspect, a soil microbial profile can be used to determine a match between soil found on the suspect’s shoes or clothing to the soil at a crime scene. However, for a robust tool to be applied in forensic application, an understanding of the uncertainty associated with any comparisons and the parameters that can significantly …

Sensitivity Of Seven Diverse Species To Blue And Green Light: Interactions With Photon Flux, Michael Chase Snowden, Bruce Bugbee, Kevin R. Cope

Plants, Soils, and Climate Faculty Publications

Despite decades of research, the effects of spectral quality on plant growth, and development are not well understood. Much of our current understanding comes from studies with daily integrated light levels that are less than 10% of summer sunlight thus making it difficult to characterize interactions between light quality and quantity. Several studies have reported that growth is increased under fluorescent lamps compared to mixtures of wavelengths from LEDs. Conclusions regarding the effect of green light fraction range from detrimental to beneficial. Here we report the effects of eight blue and green light fractions at two photosynthetic photon fluxes (PPF; …

Soil Salinity Increases The Tolerance Of Excessive Sulfur Fumigation Stress In Tomato Plants, Yuping Jiang, Xiaotao Ding, Dong Zhang, Qi Deng, Chih-Li Yu, Suping Zhou, Dafeng Hui

Agricultural and Environmental Sciences Faculty Research

To investigate the responses of plant photosynthesis and chlorophyll fluorescence to excessive sulfur fumigation stress (Sulfur) alleviated by pre-treated salt in the soil (Salt), seedlings of a tomato cultivar (Solanum lycopersicum L. ‘Money Maker’) were exposed to the Sulfur with or without the Salt treatment for 15h. Leaf fresh weight, dry weight, chlorophyll (Chl) content, carotenoid (Car) content, photosynthesis and chlorophyll fluorescence parameters were measured. The results showed that the Sulfur treatment significantly decreased leaf fresh weight, dry weight, Chl and Car contents, net photosynthetic rate (Pn), stomatal conductance (Gs), transpiration rate (Tr), maximum quantum efficiency of photosystem II (PSII) …

Multi-Sector Analysis Of The Progress And Challenges Of Soil-Transmitted Helminth Eradication In Rural Udaipur, Jessica Ellis

Independent Study Project (ISP) Collection

India is home to 240 million children currently at risk of Soil-Transmitted Helminthiasis, which is spread via unclean water, soil, and food, and causes acute pain and malnutrition. While acknowledging the research debates over WASH and mass drug administration, this study seeks to identify the systemic multidisciplinary issues affecting STH elimination efforts in rural Udaipur. Twenty-three interviews were conducted in villages, government departments, NGOs, and medical sectors to identify the challenges within each approach to deworming, and their experiences with multi-sectoral collaboration. The most recurring issues across disciplines were need for invested local leadership, increase in health literacy of adults, …

Comparative Transcriptomic Analysis Of Two Brassica Napus Near-Isogenic Lines Reveals A Network Of Genes That Influences Seed Oil Accumulation, Jingxue Wang, Sanjay Kumar Singh, Chunfang Du, Chen Li, Jianchun Fan, Sitakanta Pattanaik, Ling Yuan

Plant and Soil Sciences Faculty Publications

Rapeseed (Brassica napus) is an important oil seed crop, providing more than 13% of the world’s supply of edible oils. An in-depth knowledge of the gene network involved in biosynthesis and accumulation of seed oil is critical for the improvement of B. napus. Using available genomic and transcriptomic resources, we identified 1,750 acyl-lipid metabolism (ALM) genes that are distributed over 19 chromosomes in the B. napus genome. B. rapa and B. oleracea, two diploid progenitors of B. napus, contributed almost equally to the ALM genes. Genome collinearity analysis demonstrated that the majority of the …

A Novel Qtl Associated With Dwarf Bunt Resistance In Idaho 444 Winter Wheat, Jianli Chen, Mary J. Guttieri, Junli Zhang, David Hole, Edward Souza, Blair Goates

Green Canyon Environmental Research Area, Logan Utah

Dwarf bunt [Tilletia controversa J.G. Kühn [as ‘contraversa’], in Rabenhorst, Hedwigia 13: 188 (1874)] is a destructive disease of wheat (Triticum aestivum L.) that reduces grain yield and quality. A number of distinct genes conferring resistance to dwarf bunt have been used by breeding programs for nearly 100 years. However, few markers were identified that can be used in selection of dwarf bunt resistance. A recombinant inbred line (RIL) population derived from the bunt-resistant germplasm, Idaho 444 (IDO444), and the susceptible cultivar, Rio Blanco, was evaluated for phenotypic reaction to dwarf bunt inoculation in four trials in …

Vasoactivity And Vasoconstriction Changes In Cattle Related To Time Off Toxic Endophyte-Infected Tall Fescue, James L. Klotz, Glen E. Aiken, Jessica R. Bussard, Andrew P. Foote, David L. Harmon, Ben M. Goff, F. Neal Schrick, James R. Strickland

Plant and Soil Sciences Faculty Publications

Previous research has indicated that serotonergic and α-adrenergic receptors in peripheral vasculature are affected by exposure of cattle grazing toxic endophyte-infected (E+; Epichlöe coenophialia) tall fescue (Lolium arundinaceum). The objective of this experiment was to determine the period of time necessary for the vascular effects of ergot alkaloids to subside. Two experiments were conducted to investigate changes in vascular contractile response and vasoconstriction over time relative to removal from an ergot alkaloid-containing E+ tall fescue pasture. In Experiment 1, lateral saphenous vein biopsies were conducted on 21 predominantly Angus steers (357 ± 3 kg body weight) at …

Methane Emissions From Global Rice Fields: Magnitude, Spatiotemporal Patterns, And Environmental Controls, Bowen Zhang, Hanqin Tian, Wei Ren, Bo Tao, Chaoqun Lu, Jia Yang, Kamaljit Banger, Shufen Pan

Plant and Soil Sciences Faculty Publications

Given the importance of the potential positive feedback between methane (CH₄) emissions and climate change, it is critical to accurately estimate the magnitude and spatiotemporal patterns of CH₄ emissions from global rice fields and better understand the underlying determinants governing the emissions. Here we used a coupled biogeochemical model in combination with satellite-derived contemporary inundation area to quantify the magnitude and spatiotemporal variation of CH₄ emissions from global rice fields and attribute the environmental controls of CH₄ emissions during 1901–2010. Our study estimated that CH₄ emissions from global rice fields varied from 18.3 ± …

Quantifying Peat Carbon Accumulation In Alaska Using A Process-Based Biogeochemistry Model, Sirui Wang, Qianlai Zhuang, Zicheng Yu, Scott Bridgham, Jason K. Keller

Education Faculty Articles and Research

This study uses an integrated modeling framework that couples the dynamics of hydrology, soil thermal regime, and ecosystem carbon and nitrogen to quantify the long-term peat carbon accumulation in Alaska during the Holocene. Modeled hydrology, soil thermal regime, carbon pools and fluxes, and methane emissions are evaluated using observation data at several peatland sites in Minnesota, Alaska, and Canada. The model is then applied for a 10,000 year (15 ka to 5 ka; 1 ka = 1000 cal years before present) simulation at four peatland sites. We find that model simulations match the observed carbon accumulation rates at fen sites …

Modeling PCo2 Variability In The Gulf Of Mexico, Zuo Xue, Ruoying He, Katja Fennel, Wei-Jun Cai, Steven Lohrenz, Wei-Jen Huang, Hanqin Tian, Wei Ren, Zhengchen Zang

Plant and Soil Sciences Faculty Publications

A three-dimensional coupled physical–biogeochemical model was used to simulate and examine temporal and spatial variability of sea surface pCO₂ in the Gulf of Mexico (GoM). The model was driven by realistic atmospheric forcing, open boundary conditions from a data-assimilative global ocean circulation model, and observed freshwater and terrestrial nutrient and carbon input from major rivers. A 7-year model hindcast (2004–2010) was performed and validated against ship measurements. Model results revealed clear seasonality in surface pCO₂ and were used to estimate carbon budgets in the Gulf. Based on the average of model simulations, the GoM was a …

Regulation Of Pyrroloquinoline Quinone-Dependent Glucose Dehydrogenase Activity In The Model Rhizosphere-Dwelling Bacterium Pseudomonas Putida Kt2440, Ran An, Luke Moe

Plant and Soil Sciences Faculty Publications

Soil-dwelling microbes solubilize mineral phosphates by secreting gluconic acid, which is produced from glucose by a periplasmic glucose dehydrogenase (GDH) that requires pyrroloquinoline quinone (PQQ) as a redox coenzyme. While GDH-dependent phosphate solubilization has been observed in numerous bacteria, little is known concerning the mechanism by which this process is regulated. Here we use the model rhizosphere-dwelling bacterium Pseudomonas putida KT2440 to explore GDH activity and PQQ synthesis, as well as gene expression of the GDH-encoding gene (gcd) and PQQ biosynthesis genes (pqq operon) while under different growth conditions. We also use reverse transcription-PCR to identify transcripts …

Bulletin No. 42: The Mamacoke Conservation Area, Glenn Dreyer, Robert Askins, Scott Peterson

Bulletins

No abstract provided.

Identifying And Addressing Soil Property Issues Affecting Roadside Vegetation Establishment, Xu Li, Martha Mamo, Walter H. Schacht, Tala Awada, Humberto Blanco-Canqui

Nebraska Department of Transportation: Research Reports

Attaining adequate vegetation cover along highways is important for NDOR to comply with EPA’s stormwater regulations. However, low plant cover is a common problem on shoulders (first 16 feet off the pavement) of many highways in Nebraska. The ultimate goal of this study is to identify cost-effective engineering solutions that assure adequate seed beds (i.e., soil conditions) for establishment of selected seeding mixtures. The objectives of this study are to (1) characterize the soil properties along roadsides where vegetation stands have not developed well, and (2) verify the effects of select soil property parameters on plant germination and establishment.

Sampling …

A R2r3-Myb Transcription Factor Regulates The Flavonol Biosynthetic Pathway In A Traditional Chinese Medicinal Plant, Epimedium Sagittatum, Wenjun Huang, A. B. M. Khaldun, Jianjun Chen, Chanjuan Zhang, Haiyan Lv, Ling Yuan, Ying Wang

Plant and Soil Sciences Faculty Publications

Flavonols as plant secondary metabolites with vital roles in plant development and defense against UV light, have been demonstrated to be the main bioactive components (BCs) in the genus Epimedium plants, several species of which are used as materials for Herba Epimedii, an important traditional Chinese medicine. The flavonol biosynthetic pathway genes had been already isolated from Epimedium sagittatum, but a R2R3-MYB transcription factor regulating the flavonol synthesis has not been functionally characterized so far in Epimedium plants. In this study, we isolated and characterized the R2R3-MYB transcription factor EsMYBF1 involved in regulation of the flavonol biosynthetic pathway …

Three-Dimensional Architecture And Hydrostratigraphy Of Cross-Cutting Buried Valleys Using Airborne Electromagnetics, Glaciated Central Lowlands, Nebraska, Usa, Jesse T. Korus Dr., Robert Matthew Joeckel, Dana P. Divine, Jared D. Abraham

Conservation and Survey Division

Buried valleys are characteristic features of glaciated landscapes, and their deposits host important aquifers worldwide. Understanding the stratigraphic architecture of these deposits is essential for protecting groundwater and interpreting sedimentary processes in subglacial and ice-marginal environments. The relationships between depositional architecture, topography and hydrostratigraphy in dissected, pre-Illinoian till sheets is poorly understood. Boreholes alone are inadequate to characterize the complex geology of buried valleys, but airborne electromagnetic surveys have proven useful for this purpose. A key question is whether the sedimentary architecture of buried valleys can be interpreted from airborne electromagnetic profiles. This study employs airborne electromagnetic resistivity profiles to …

Soil Extracellular Enzyme Activities, Soil Carbon And Nitrogen Storage Under Nitrogen Fertilization: A Meta-Analysis, Siyang Jian, Jianwei Li, Ji Chen, Gangsheng Wang, Melanie A. Mayes, Kudjo E. Dzantor, Dafeng Hui, Yiqi Luo

Agricultural and Environmental Sciences Faculty Research

Nitrogen (N) fertilization affects the rate of soil organic carbon (SOC) decomposition by regulating extracellular enzyme activities (EEA). Extracellular enzymes have not been represented in global biogeochemical models. Understanding the relationships among EEA and SOC, soil N (TN), and soil microbial biomass carbon (MBC) under N fertilization would enable modeling of the influence of EEA on SOC decomposition. Based on 65 published studies, we synthesized the activities of α-1,4-glucosidase (AG), β-1,4-glucosidase (BG), β-d-cellobiosidase (CBH), β-1,4-xylosidase (BX), β-1,4-N-acetyl-glucosaminidase (NAG), leucine amino peptidase (LAP), urease (UREA), acid phosphatase (AP), phenol oxidase (PHO), and peroxidase (PEO) in response to N fertilization. The proxy …

High-Input Management Systems Effect On Soybean Seed Yield, Yield Components, And Economic Break-Even Probabilities, John M. Orlowski, Bryson J. Haverkamp, Randall G. Laurenz, David A. Marburger, Eric W. Wilson, Shaun N. Casteel, Shawn P. Conley, Seth L. Naeve, Emerson D. Nafziger, Kraig L. Roozeboom, William J. Ross, Kurt D. Thelen, Chad Lee

Plant and Soil Sciences Faculty Publications

Elevated soybean [Glycine max (L.) Merr.] prices have spurred interest in maximizing soybean seed yield and has led growers to increase the number of inputs in their production systems. However, little information exists about the effects of high-input management on soybean yield and profitability. The purpose of this study was to investigate the effects of individual inputs, as well as combinations of inputs marketed to protect or increase soybean seed yield, yield components, and economic break-even probabilities. Studies were established in nine states and three soybean growing regions (North, Central, and South) between 2012 and 2014. In each site-year …

Costimulation Of Soil Glycosidase Activity And Soil Respiration By Nitrogen Addition, Ji Chen, Yiqi Luo, Jianwei Li, Xuhui Zhou, Junji Cao, Rui-Wu Wang, Yunqiang Wang, Shelby Shelton, Zhao Jin, Laura M. Walker, Zhaozhong Feng, Shuli Niu, Wenting Feng, Siyang Jian, Lingyan Zhou

Agricultural and Environmental Sciences Faculty Research

Unprecedented levels of nitrogen (N) have been deposited in ecosystems over the past century, which is expected to have cascading effects on microbially mediated soil respiration (SR). Extracellular enzymes play critical roles on the degradation of soil organic matter, and measurements of their activities are potentially useful indicators of SR. The links between soil extracellular enzymatic activities (EEAs) and SR under N addition, however, have not been established. We therefore conducted a meta-analysis from 62 publications to synthesize the responses of soil EEAs and SR to elevated N. Nitrogen addition significantly increased glycosidase activity (GA) by 13.0%, α-1,4-glucosidase (AG) by …

Performance Of Endophyte Infected Tall Fescue In Europe And North America, Kari Saikkonen, Timothy D. Phillips, Stanley H. Faeth, Rebecca L. Mcculley, Irma Saloniemi, Marjo Helander

Plant and Soil Sciences Faculty Publications

Human assisted plant invasions from Europe to North America have been more common than the reverse. We tested endophyte-mediated performance of tall fescue in parallel three year experiments in Europe and the USA using endophyte infected and uninfected wild and cultivated plants. Experimental plants were subjected to nutrient and water treatments. Whereas endophyte infection increased tall fescue performance in general, the effects of endophytes on plant growth and reproduction varied among plant origins under different environmental conditions. Naturally endophyte-free Finnish cultivar ‘Retu’ performed equally well as ‘Kentucky-31’ in both geographic locations. All Eurasian origin plants performed well in the US. …

Properties And Nutrient Status Of Degraded Soils In Luzon, Philippines, Michelle Ann M. Calubaquib, Ian A. Navarrete, Pearl B. Sanchez

Environmental Science Faculty Publications

A prerequisite to soil management, particularly in degraded soils, is a good knowledge of the characteristics and fertility status of degraded soil, which is fundamental to planning suitable soil management strategies for crop production purposes. The aim of this study was to determine the physico-chemical and mineralogical properties and fertility constraints of degraded soils in Luzon, Philippines. Ten surface soil samples were collected from 10 degraded soils representing the dominant soil series in Luzon Island. These soils were analyzed for physical, chemical and mineralogical properties. Results revealed that all soils have high clay content (except Bantay soil), which impedes cultivation. …

A Hydrochemical Assessment Of Groundwater Recharge And Flow In The Broome Sandstone Aquifer, La Grange Area, Western Australia, Glenn A. Harrington, Nikki M. Harrington

Natural resources commissioned reports

The Department of Agriculture and Food Western Australia has undertaken a four-year Royalties for Regions funded project in the La Grange Groundwater Area south of Broome. The purpose of the project was to provide improved knowledge and confidence about soil suitability and water availability for potential expansion of irrigated agriculture in the region. A range of complementary techniques have been used to assess the groundwater resources in the Broome Sandstone aquifer, including contemporary approaches such as drilling and aquifer pumping tests, and state-of-the-art approaches such as airborne geophysical surveys and hydrochemistry investigations.

This report presents a synthesis of all hydrochemistry …

The Cosmic-Ray Neutron Probe Method For Estimating Field Scale Soil Water Content: Advances And Applications, William A. Avery

School of Natural Resources: Dissertations, Theses, and Student Research

The need for accurate, real-time, reliable, and multi-scale soil water content (SWC) monitoring is critical for a multitude of scientific disciplines trying to understand and predict the earth’s terrestrial energy, water, and nutrient cycles. One promising technique to help meet this demand is fixed and roving cosmic-ray neutron probes (CRNP). However, the relationship between observed low-energy neutrons and SWC is affected by local soil and vegetation calibration parameters. This effect may be accounted for by a calibrated equation based on local soil type and the amount of standing biomass. However, determining the calibration parameters for this equation is labor and …