Soil Science Commons^™

Polycyclic Aromatic Hydrocarbon (Pah) Contamination In Urban Soils: Testing And Management, Melissa Chilinski, Paul Grossl, Melanie Stock

All Current Publications

Polycyclic aromatic hydrocarbons (PAHs) are a large class of chemicals and common environmental pollutants. Understanding which PAHs and soil test levels may impact human health is an important aspect of gardening and micro-farming, particularly in urban environments that are at increased risk of soil contamination. Land use histories, such as sites associated with vehicle and industrial emissions, burning, and dumping, can elevate concentrations of PAHs in soils. This fact sheet provides instructions on assessing your site for PAHs that may present health risks to humans, testing the soil, and first steps for interpretation and management.

Digital Atlas Of The Vascular Plants Of Utah, R. Douglas Ramsey, Leila M. Shultz, Wanda Lindquist, Chris Garrard, Mindy Wheeler

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Locations of 74,755 vascular plant vouchers representing 2,425 species were digitized into a spatial database from the Atlas of the Vascular Plants of Utah (Albee et al. 1988). Source maps consisted of 1:6,000,000-scale shaded relief maps of Utah with points representing collection locations by species. Location points, representing 1 or more specimens, were transposed onto these maps from the approximately 400,000 herbarium records of 3 major universities and federal land management agencies.

Pariette Wetlands Water, Sediment And Plant Total Selenium Concentration, Colleen P. Jones, Paul R. Grossl, Astrid R. Jacobson

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We measured total Selenium in plants from July through November of 2012 and in water, macroinvertebrates, plants, and sediments from July of 2014 from Pariette Wetlands, Utah, U.S.A. to test for spatial, temporal, plant species and plant tissue distribution of Selenium.

Trace Element Contamination In Urban Soils: Testing And Management, Melissa Chilinski, Melanie Stock, Paul R. Grossl, Eli Oliver

All Current Publications

Trace elements, often referred to as heavy metals, naturally occur in the soil at low levels. Certain land use histories can elevate the concentrations of trace elements to levels that present health risks. Understanding which elements and soil test values may impact human or crop health is an important aspect of gardening and micro-farming, particularly in urban environments that are at increased risk of soil contamination. This fact sheet provides instructions on interpreting soil test results for trace elements through the Total Element Composition EPA 3050B Soil Test (#S19) at Utah State University Analytical Laboratory.

Moderate Plant–Soil Feedbacks Have Small Effects On The Biodiversity–Productivity Relationship: A Field Experiment, Josephine Grenzer, Andrew Kulmatiski, Leslie Forero, Anne Ebeling, Nico Eisenhauer, Jeanette Norton

Wildland Resources Student Research

Plant–soil feedback (PSF) has gained attention as a mechanism promoting plant growth and coexistence. However, most PSF research has measured monoculture growth in greenhouse conditions. Translating PSFs into effects on plant growth in field communities remains an important frontier for PSF research. Using a 4-year, factorial field experiment in Jena, Germany, we measured the growth of nine grassland species on soils conditioned by each of the target species (i.e., 72 PSFs). Plant community models were parameterized with or without these PSF effects, and model predictions were compared to plant biomass production in diversity–productivity experiments. Plants created soils that changed subsequent …

Empirical Models For Predicting Water And Heat Flow Properties Of Permafrost Soils, Michael T. O'Connor, M. Bayani Cardenas, Stephen B. Ferencz, Yue Wu, Bethany T. Neilson, Jingyi Chen, George W. Kling

Publications

Warming and thawing in the Arctic are promoting biogeochemical processing and hydrologic transport in carbon‐rich permafrost and soils that transfer carbon to surface waters or the atmosphere. Hydrologic and biogeochemical impacts of thawing are challenging to predict with sparse information on arctic soil hydraulic and thermal properties. We developed empirical and statistical models of soil properties for three main strata in the shallow, seasonally thawed soils above permafrost in a study area of ~7,500 km² in Alaska. The models show that soil vertical stratification and hydraulic properties are predictable based on vegetation cover and slope. We also show that …

A 100-M-Scale Modeling Study Of A Gale Event On The Lee Side Of A Long Narrow Mountain, Halie Xue, Jian Li, Tingting Qian, Hongping Gu

Plants, Soils, and Climate Faculty Publications

In this study, a gale event that occurred on the lee side of a long narrow mountain was investigated, together with the associated mountain flows, using a realistic-case large-eddy simulation (LES) that is based on the Weather Research and Forecasting Model. The mountain is located on the southeastern Tibetan Plateau, where approximately 58 gales occur annually, mostly in the afternoons during the winter season. Benefitting from realistic topography and high horizontal resolution as fine as 111 m, the LES can replicate features similar to the wind fields observed during the gale period. Investigation of the early morning wind structure over …

Salt Tolerance Of Sego Supremetm Plants, Asmita Paudel, Ji Jhong Chen, Youping Sun, Yuxiang Wang, Richard M. Anderson

Plants, Soils, and Climate Faculty Publications

Sego Supreme^TM is a designated plant breeding and introduction program at the Utah State University Botanical Center and the Center for Water Efficient Landscaping. This plant selection program introduces native and adapted plants to the arid West for aesthetic landscaping and water conservation. The plants are evaluated for characteristics such as color, flowering, ease of propagation, market demand, disease/pest resistance, and drought tolerance. However, salt tolerance has not been considered during the evaluation processes. Four Sego Supreme^TM plants [Aquilegia barnebyi (oil shale columbine), Clematis fruticosa (Mongolian gold clematis), Epilobium septentrionale (northern willowherb), and Tetraneuris acaulis var. arizonica …

Differences In Drought Tolerance Among Gisela® Cherry Rootstocks Determined Using Automated Weighing Lysimeters, Lance V. Stott, Brent Black, Bruce Bugbee

Plants, Soils, and Climate Faculty Publications

The Gisela® series of dwarfing rootstock are widely used because they enable high-density production, but they may be sensitive to drought. Drought tolerance may be associated with root-zone distribution and depth or with physiological adaptation to low water potential. Here we describe a novel technique for determining physiological tolerance to drought when root distribution is held constant. In two matching studies, we continuously measured transpiration of two groups of eight trees using a 16-container automated weighing lysimeter system in a greenhouse. With this system, Gisela® 3, 5, and 12 (G.3, G.5, and G.12) rootstocks were subjected to multiple, controlled drought …

Consecutive Extreme Flooding And Heat Wave In Japan: Are They Becoming A Norm?, Shih-Yu Simon Wang, Hyungjun Kim, Dim Coumou, Jin-Ho Yoon, Lin Zhao, Robert R. Gillies

Plants, Soils, and Climate Faculty Publications

In July 2018, Japan experienced two contrasting, yet consecutive, extreme events: a devastating flood in early July followed by unprecedented heat waves a week later. Death tolls from these two extreme events combined exceeded 300, accompanying tremendous economic losses (BBC: July 24, 2018; AP: July 30, 2018). Meteorological analysis on these 2018 events quickly emerged (JMA-TCC, 2018; Kotsuki et al., 2019; Tsuguti et al., 2019), highlighting several compound factors: a strengthened subtropical anticyclone, a deepened synoptic trough, and Typhoon Prapiroon that collectively enhanced the Baiu rainband (the Japanese summer monsoon), fostering heavy precipitation. The comprehensive study of these events, conducted …

On The Relationship Between North India Summer Monsoon Rainfall And East Equatorial Indian Ocean Warming, Ramesh Kumar Yadav, Mathew Koll Roxy

Plants, Soils and Climate Student Research

Generally, a strong north India summer-monsoon rainfall (NISR) is associated with anomalous upper troposphere ridge over northwest of India. This ridge triggers anomalous northerly winds over Tibetan Plateau and easterlies over India. The easterly anomaly over India reduces the tropospheric wind shear, while the northerly at Tibetan plateau allows frequent intrusions of high-latitude dry and cold meridional winds to interact with the lower-level relatively warm and moist easterly monsoonal flow, enhancing the NISR. The current study, using a suite of observations, reanalysis products and numerical model sensitivity experiments, explores the changes in NISR, and its association with the warming in …

Increased Variability Of Thailand's Chao Phraya River Peak Season Flow And Its Association With Enso Variability: Evidence From Tree Ring Δ18O, Chenxi Xu, Brendan M. Buckley, Parichart Promchote, S.-Y. Simon Wang, Nathsuda Pumijumnong, Wenling An, Masaki Sano, Takeshi Nakatsuka, Zhengtang Guo

Plants, Soils, and Climate Faculty Publications

We present a statistically robust reconstruction of Thailand's Chao Phraya River peak season streamflow (CPRPF) that spans the 202 years from 1804 to 2005 CE. Our reconstruction is based on tree ring δ¹⁸O series derived from three Pinus merkusii sites from Laos and Thailand. The regional δ¹⁸O index accounts for 57% of the observed variance of CPRPF. Spatial correlation and 21‐year running correlation analyses reveal that CPRPF is greatly influenced by regional precipitation variations associated with the El Niño–Southern Oscillation (ENSO). Periods of enhanced and reduced ENSO activity are associated with strong and weak ENSO‐streamflow correlation, …

Relative Salt Tolerance Of Seven Japanese Spirea Cultivars, Yuxiang Wang, Liqin Li, Youping Sun, Xin Dai

Plants, Soils, and Climate Faculty Publications

Spirea (Spiraea sp.) plants are commonly used in landscapes in Utah and the intermountain western United States. The relative salt tolerance of seven japanese spirea (Spiraea japonica) cultivars (Galen, Minspi, NCSX1, NCSX2, SMNSJMFP, Tracy, and Yan) were evaluated in a greenhouse. Plants were irrigated with a nutrient solution with an electrical conductivity (EC) of 1.2 dSmL1 (control) or saline solutions with an EC of 3.0 or 6.0 dSmL1 once per week for 8 weeks. At 8 weeks after the initiation of treatment, all japanese spirea cultivars irrigated with saline solution with an EC of 3.0 dSmL1 still exhibited good or …

Ground, Proximal, And Satellite Remote Sensing Of Soil Moisture, Ebrahim Babaeian, Morteza Sadeghi, Scott B. Jones, Carsten Montzka, Harry Vereecken, Markus Tuller

Plants, Soils, and Climate Faculty Publications

Soil moisture (SM) is a key hydrologic state variable that is of significant importance for numerous Earth and environmental science applications that directly impact the global environment and human society. Potential applications include, but are not limited to, forecasting of weather and climate variability; prediction and monitoring of drought conditions; management and allocation of water resources; agricultural plant production and alleviation of famine; prevention of natural disasters such as wild fires, landslides, floods, and dust storms; or monitoring of ecosystem response to climate change. Because of the importance and wide‐ranging applicability of highly variable spatial and temporal SM information that …

Pantropical Climate Interactions, Wenju Cai, Lixin Wu, Matthieu Lengaigne, Tim Li, Shayne Mcgregor, Jong-Seong Kug, Jin-Yi Yu, Malte F. Stuecker, Agus Santoso, Xichen Li, Yoo-Geun Ham, Yoshimitsu Chikamoto, Benjamin Ng, Michael J. Mcphaden, Yan Du, Et Al.

Plants, Soils, and Climate Faculty Publications

The El Niño–Southern Oscillation (ENSO), which originates in the Pacific, is the strongest and most well-known mode of tropical climate variability. Its reach is global, and it can force climate variations of the tropical Atlantic and Indian Oceans by perturbing the global atmospheric circulation. Less appreciated is how the tropical Atlantic and Indian Oceans affect the Pacific. Especially noteworthy is the multidecadal Atlantic warming that began in the late 1990s, because recent research suggests that it has influenced Indo-Pacific climate, the character of the ENSO cycle, and the hiatus in global surface warming. Discovery of these pantropical interactions provides a …

Examination Of The Climate Factors That Reduced Wheat Yield In Northwest India During The 2000s, Avik Mukherjee, Shih-Yu (Simon) Wang, Parichart Promchote

Plants, Soils, and Climate Faculty Publications

In India, a significant reduction of wheat yield would cause a widespread impact on food security for 1.35 billion people. The two highest wheat producing states, Punjab and Haryana in northern India, experienced a prolonged period of anomalously low wheat yield during 2002–2010. The extent of climate variability and change in influencing this prolonged reduction in wheat yield was examined. Daily air temperature (T_max and T_ave) was used to calculate the number of days above optimum temperature and growing degree days (GDD) anomaly. Two drought indices, the standard precipitation and evapotranspiration index and the radiation-based precipitation index, …

Genetic Loci Associated With Salt Tolerance In Advanced Breeding Populations Of Tetraploid Alfalfa Using Genome-Wide Association Studies, Xiang-Ping Liu, Charles Hawkins, Michael D. Peel, Long-Xi Yu

Plants, Soils, and Climate Faculty Publications

Many agricultural lands in the western United States consist of soil with high concentrations of salt, which is detrimental to alfalfa (Medicago sativa L.) growth and production, especially in the region where water resource is limited. Developing alfalfa varieties with salt tolerance is imperative for sustainable production under increasing soil salinity. In the present study, we used advanced alfalfa breeding populations and evaluated five traits related to salt tolerance including biomass dry weight (DW) and fresh weight (FW), plant height (PH), leaf relative water content (RWC), and stomatal conductance (SC) under control and salt stress. Stress susceptibility index (SSI) …

A Novel Shortwave Infrared Proximal Sensing Approach To Quantify The Water Stability Of Soil Aggregates, Azadeh Gholoubi, Hojat Emami, Scott B. Jones, Markus Tuller

Plants, Soils, and Climate Faculty Publications

Soil structure and aggregate stability (AS) are critical soil properties affecting water infiltration, root growth, and resistance to soil and wind erosion. Changes in AS may be early indicators of soil degradation, pointing to low organic matter (OM) content, reduced biological activity, or poor nutrient cycling. Hence, efficient and reliable AS measurement techniques are essential for detection, management, and remediation of degraded soil resources. Here we quantify soil AS by developing a novel proximal sensing technique based on shortwave infrared (SWIR) reflectance measurements. The novel approach is similar to the well-documented high energy moisture characteristic (HEMC) method, which yields a …

El Niño-Southern Oscillation Complexity, Axel Timmermann, Soon-Il An, Jong-Seong Kug, Fei-Fei Jin, Wenju Cai, Antonietta Capotondi, Kim Cobb, Matthieu Lengaigne, Michal J. Mcphaden, Malte F. Stuecker, Karl Stein, Andrew T. Wittenberg, Kyung-Sook Yun, Tobias Bayr, Han-Ching Chen, Yoshimitsu Chikamoto, Et Al.

Plants, Soils, and Climate Faculty Publications

El Niño events are characterized by surface warming of the tropical Pacific Ocean and weakening of equatorial trade winds that occur every few years. Such conditions are accompanied by changes in atmospheric and oceanic circulation, affecting global climate, marine and terrestrial ecosystems, fisheries and human activities. The alternation of warm El Niño and cold La Niña conditions, referred to as the El Niño–Southern Oscillation (ENSO), represents the strongest year-to-year fluctuation of the global climate system. Here we provide a synopsis of our current understanding of the spatio-temporal complexity of this important climate mode and its influence on the Earth system.

Regional Trends In Early-Monsoon Rainfall Over Vietnam And Ccsm4 Attribution, Rong Li, S.-Y. Simon Wang, Robert R. Gillies, Brendan Buckley, Jin-Ho Yoon, Changrae Cho

Plants, Soils, and Climate Faculty Publications

The analysis of precipitation trends for Vietnam revealed that early-monsoon precipitation has increased over the past three decades but to varying degrees over the northern, central and southern portions of the country. Upon investigation, it was found that the change in early-monsoon precipitation is associated with changes in the low-level cyclonic airflow over the South China Sea and Indochina that is embedded in the large-scale atmospheric circulation associated with a “La Niña-like” anomalous sea surface temperature pattern with warming in the western Pacific and Indian Oceans and cooling in the eastern Pacific. The Community Climate System Model version 4 (CCSM4) …

Accelerated Increase In The Arctic Tropospheric Warming Events Surpassing Stratospheric Warming Events During Winter, Shih-Yu (Simon) Wang, Yen-Heng Lin, Ming-Ying Lee, Jin-Ho Yoon, Jonathan D.D. Meyer, Philip J. Rasch

Plants, Soils, and Climate Faculty Publications

In January 2016, a robust reversal of the Arctic Oscillation (AO) took place associated with a rapid tropospheric warming in the Arctic region; this was followed by the occurrence of a classic sudden stratospheric warming in March-April. The succession of these two distinct Arctic warming events provides a stimulating opportunity to examine their characteristics in terms of similarities and differences. Historical cases of these two types of Arctic warming were identified and validated based upon tropical linkages with the Madden-Julian Oscillation and El Niño as well as those documented in previous studies. Our results indicate a recent and accelerated increase …

Rapid Surface-Water Volume Estimations In Beaver Ponds, Daniel J. Karran, Cherie J. Westbrook, Joseph Michael Wheaton, Carol A. Johnston, Angela Bedard-Haughn

Watershed Sciences Faculty Publications

Beaver ponds are surface-water features that are transient through space and time. Such qualities complicate the inclusion of beaver ponds in local and regional water balances, and in hydrological models, as reliable estimates of surface-water storage are difficult to acquire without time- and labour-intensive topographic surveys. A simpler approach to overcome this challenge is needed, given the abundance of the beaver ponds in North America, Eurasia, and southern South America. We investigated whether simple morphometric characteristics derived from readily available aerial imagery or quickly measured field attributes of beaver ponds can be used to approximate surface-water storage among the range …

Assessing The Risk Of Carbon Dioxide Emissions From Blue Carbon Ecosystems, Catherine E. Lovelock, Trisha Brooke Atwood, Jeff Baldock, Carlos M. Duarte, Sharyn Hickey, Paul S. Lavery, Pere Masque, Peter I. Macreadie, Aurora M. Ricart, Oscar Serrano, Andy Steven

Watershed Sciences Faculty Publications

“Blue carbon” ecosystems, which include tidal marshes, mangrove forests, and seagrass meadows, have large stocks of organic carbon (C_org) in their soils. These carbon stocks are vulnerable to decomposition and – if degraded – can be released to the atmosphere in the form of CO₂. We present a framework to help assess the relative risk of CO₂ emissions from degraded soils, thereby supporting inclusion of soil C_org into blue carbon projects and establishing a means to prioritize management for their carbon values. Assessing the risk of CO₂ emissions after various kinds of disturbances …

The Optical Trapezoid Model: A Novel Approach To Remote Sensing Of Soil Moisture Applied To Sentinel-2 And Landsat-8 Observations, Morteza Sadeghi, Ebrahim Babaeian, Markus Tuller, Scott B. Jones

Plants, Soils, and Climate Faculty Publications

The “trapezoid” or “triangle” model constitutes the most popular approach to remote sensing (RS) of surface soil moisture based on coupled thermal (i.e., land surface temperature) and optical RS observations. The model, hereinafter referred to as Thermal-Optical TRAapezoid Model (TOTRAM), is based on interpretation of the pixel distribution within the land surface temperature - vegetation index (LST-VI) space. TOTRAM suffers from two inherent limitations. It is not applicable to satellites that do not provide thermal data (e.g., Sentinel-2) and it requires parameterization for each individual observation date. To overcome these restrictions we propose a novel OPtical TRApezoid Model (OPTRAM), which …

Sensitivity Of Seven Diverse Species To Blue And Green Light: Interactions With Photon Flux, Michael Chase Snowden, Bruce Bugbee, Kevin R. Cope

Plants, Soils, and Climate Faculty Publications

Despite decades of research, the effects of spectral quality on plant growth, and development are not well understood. Much of our current understanding comes from studies with daily integrated light levels that are less than 10% of summer sunlight thus making it difficult to characterize interactions between light quality and quantity. Several studies have reported that growth is increased under fluorescent lamps compared to mixtures of wavelengths from LEDs. Conclusions regarding the effect of green light fraction range from detrimental to beneficial. Here we report the effects of eight blue and green light fractions at two photosynthetic photon fluxes (PPF; …

A Novel Qtl Associated With Dwarf Bunt Resistance In Idaho 444 Winter Wheat, Jianli Chen, Mary J. Guttieri, Junli Zhang, David Hole, Edward Souza, Blair Goates

Green Canyon Environmental Research Area, Logan Utah

Dwarf bunt [Tilletia controversa J.G. Kühn [as ‘contraversa’], in Rabenhorst, Hedwigia 13: 188 (1874)] is a destructive disease of wheat (Triticum aestivum L.) that reduces grain yield and quality. A number of distinct genes conferring resistance to dwarf bunt have been used by breeding programs for nearly 100 years. However, few markers were identified that can be used in selection of dwarf bunt resistance. A recombinant inbred line (RIL) population derived from the bunt-resistant germplasm, Idaho 444 (IDO444), and the susceptible cultivar, Rio Blanco, was evaluated for phenotypic reaction to dwarf bunt inoculation in four trials in …

Water Use Of Kentucky Bluegrass Varieties, Shawn Foster

Research on Capitol Hill

• With drought so prevalent in the West, water use on urban landscapes is being closely scrutinized with up to 60% of urban water use directed to landscape irrigation-primarily our lawns.
• Kentucky bluegrass (Poa pratensis L.) is widely used because of its soft texture, attractive color, and ability to recover from intensive use.
• More water-efficient varieties of Kentucky bluegrass may result in less irrigation yet maintain quality and function of the turf.

Experimental Evidence For Drought Induced Alternative Stable States Of Soil Moisture, David A. Robinson, Scott B. Jones, Inma Lebron, Sabine Reinsch, Maria T. Dominguez, Andrew R. Smith, Davey L. Jones, Miles R. Marshall, Bridget A. Emmett

Plants, Soils, and Climate Faculty Publications

Ecosystems may exhibit alternative stable states (ASS) in response to environmental change. Modelling and observational data broadly support the theory of ASS, however evidence from manipulation experiments supporting this theory is limited. Here, we provide long-term manipulation and observation data supporting the existence of drought induced alternative stable soil moisture states (irreversible soil wetting) in upland Atlantic heath, dominated by Calluna vulgaris (L.) Hull. Manipulated repeated moderate summer drought, and intense natural summer drought both lowered resilience resulting in shifts in soil moisture dynamics. The repeated moderate summer drought decreased winter soil moisture retention by ∼10%. However, intense summer drought, …

Role Of The Strengthened El Nino Teleconnection In The May 2015 Floods Over The Southern Great Plains, S.-Y. Wang, W.-R. Huang, H.-H. Hsu, R. R. Gillies

Plants, Soils, and Climate Faculty Publications

The climate anomalies leading to the May 2015 floods in Texas and Oklahoma were analyzed in the context of El Niño teleconnection in a warmer climate. A developing El Niño tends to increase late-spring precipitation in the southern Great Plains, and this effect has intensified since 1980. Anthropogenic global warming contributed to the physical processes that caused the persistent precipitation in May 2015: Warming in the tropical Pacific acted to strengthen the teleconnection toward North America, modification of zonal wave 5 circulation that deepened the stationary trough west of Texas, and enhanced Great Plains low-level southerlies increasing moisture supply from …

Machine Learning For Predicting Soil Classes In Three Semi-Arid Landscapes, Colby W. Brungard, Janis L. Boettinger, Michael C. Duniway, Skye A. Wills, Thomas C. Edwards Jr.

Plants, Soils, and Climate Faculty Publications

Mapping the spatial distribution of soil taxonomic classes is important for informing soil use and management decisions. Digital soil mapping (DSM) can quantitatively predict the spatial distribution of soil taxonomic classes. Key components of DSM are the method and the set of environmental covariates used to predict soil classes. Machine learning is a general term for a broad set of statistical modeling techniques. Many different machine learning models have been applied in the literature and there are different approaches for selecting covariates for DSM. However, there is little guidance as to which, if any, machine learning model and covariate set …