Theory and Algorithms Commons^™

Applications Of Sampling And Estimation On Networks, Fabricio Murai Ferreira

Doctoral Dissertations

Networks or graphs are fundamental abstractions that allow us to study many important real systems, such as the Web, social networks and scientific collaboration. It is impossible to completely understand these systems and answer fundamental questions related to them without considering the way their components are connected, i.e., their topology. However, topology is not the only relevant aspect of networks. Nodes often have information associated with them, which can be regarded as node attributes or labels. An important problem is then how to characterize a network w.r.t. topology and node label distributions. Another important problem is how to design efficient …

Stochastic Network Design: Models And Scalable Algorithms, Xiaojian Wu

Doctoral Dissertations

Many natural and social phenomena occur in networks. Examples include the spread of information, ideas, and opinions through a social network, the propagation of an infectious disease among people, and the spread of species within an interconnected habitat network. The ability to modify a phenomenon towards some desired outcomes has widely recognized benefits to our society and the economy. The outcome of a phenomenon is largely determined by the topology or properties of its underlying network. A decision maker can take management actions to modify a network and, therefore, change the outcome of the phenomenon. A management action is an …

Efficient Inference, Search And Evaluation For Latent Variable Models Of Text With Applications To Information Retrieval And Machine Translation, Kriste Krstovski

Doctoral Dissertations

Latent variable models of text, such as topic models, have been explored in many areas of natural language processing, information retrieval and machine translation to aid tasks such as exploratory data analysis, automated topic clustering and finding similar documents in mono- and multilingual collections. Many additional applications of these models, however, could be enabled by more efficient techniques for processing large datasets. In this thesis, we introduce novel methods that offer efficient inference, search and evaluation for latent variable models of text. We present efficient, online inference for representing documents in several languages in a common topic space and fast …

Wind Farm Wake Modeling And Analysis Of Wake Impacts In A Wind Farm, Yujia Hao

Doctoral Dissertations

More and more wind turbines have been grouped in the same location during the last decades to take the advantage of profitable wind resources and reduced maintenance cost. However wind turbines located in a wind farm are subject to a wind field that is substantially modified compared to the ambient wind field due to wake effects. The wake results in a reduced power production, increased load variation on the waked turbine, and reduced wake farm efficiency. Therefore the wake has long been an important concern for the wind farm installation, maintenance, and control. Thus a wake simulation tool is required. …

Gemini: A Computationally-Efficient Search Engine For Large Gene Expression Datasets, Timothy Defreitas, Hachem Saddiki, Patrick Flaherty

Mathematics and Statistics Department Faculty Publication Series

Background

Low-cost DNA sequencing allows organizations to accumulate massive amounts of genomic data and use that data to answer a diverse range of research questions. Presently, users must search for relevant genomic data using a keyword, accession number of meta-data tag. However, in this search paradigm the form of the query – a text-based string – is mismatched with the form of the target – a genomic profile.

Results

To improve access to massive genomic data resources, we have developed a fast search engine, GEMINI, that uses a genomic profile as a query to search for similar genomic profiles. GEMINI …