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Full-Text Articles in Databases and Information Systems

Dietary Microrna Database (Dmd): An Archive Database And Analytic Tool For Food-Borne Micrornas, Kevin Chiang, Jiang Shu, Janos Zempleni, Juan Cui Jun 2015

Dietary Microrna Database (Dmd): An Archive Database And Analytic Tool For Food-Borne Micrornas, Kevin Chiang, Jiang Shu, Janos Zempleni, Juan Cui

School of Computing: Faculty Publications

With the advent of high throughput technology, a huge amount of microRNA information has been added to the growing body of knowledge for non-coding RNAs. Here we present the Dietary MicroRNA Databases (DMD), the first repository for archiving and analyzing the published and novel microRNAs discovered in dietary resources. Currently there are fifteen types of dietary species, such as apple, grape, cow milk, and cow fat, included in the database originating from 9 plant and 5 animal species. Annotation for each entry, a mature microRNA indexed as DM0000*, covers information of the mature sequences, genome locations, hairpin structures of parental …


An Approach To The Virtual Flora Of Mongolia – From A Data Repository To An Expert System, Http://Greif.Uni-Greifswald.De/Floragreif/, Jörg Hartleib, Martin Schnittler, Sabrina Rilke, Anne Zemmrich, Bernd Bobertz, Ulrike Najmi, Reinhard Zölitz, Susanne Starke Jan 2012

An Approach To The Virtual Flora Of Mongolia – From A Data Repository To An Expert System, Http://Greif.Uni-Greifswald.De/Floragreif/, Jörg Hartleib, Martin Schnittler, Sabrina Rilke, Anne Zemmrich, Bernd Bobertz, Ulrike Najmi, Reinhard Zölitz, Susanne Starke

Erforschung biologischer Ressourcen der Mongolei / Exploration into the Biological Resources of Mongolia, ISSN 0440-1298

FloraGREIF is an internet accessible information system providing taxonomic, phytogeographic and ecological information on Mongolia’s flora in terms of descriptions, high-resolution plant images and an interactive WebGIS application. Organised along an updated checklist of the approx. 3000 Mongolian vascular plants that serves as a taxonomic backbone, information is split into the taxon level, referring to plant species, and the record level, referring to record or a collected plant specimen. At the latter level, images of living plants, scans of herbarium sheets, habitat photos and further notes can be found. Both data levels are linked by the name of the respective …


Using Gis To Locate Areas For Growing Quality Coffee In Honduras, Ellen Mickle Apr 2009

Using Gis To Locate Areas For Growing Quality Coffee In Honduras, Ellen Mickle

Department of Environmental Studies: Undergraduate Student Theses

Abstract Small-scale coffee producers worldwide remain vulnerable to price fluctuations after the 1999-2003 coffee crisis. One way to increase small-scale farmer economic resilience is to produce a more expensive product, such as quality coffee. There is growing demand in coffee-producing and coffee-importing countries for user-friendly tools that facilitate the marketing of quality coffee. The purpose of this study is to develop a prototypical quality coffee marketing tool in the form of a GIS model that identifies regions for producing quality coffee in a country not usually associated with quality coffee, Honduras. Maps of areas for growing quality coffee were produced …


Getting Started With Prpl, Qingfeng Guan Apr 2008

Getting Started With Prpl, Qingfeng Guan

School of Natural Resources: Faculty Publications

pRPL is an open-source1 general-purpose parallel Raster Processing programming Library developed by Qingfeng Guan, in the Department of Geography, University of California, Santa Barbara. pRPL encapsulates complex parallel computing utilities and routines specifically for raster processing (e.g., raster data decomposition, distribution and gathering among multiple processors, inter-processor communication and data exchange), and provides an easy-to-use interface for users to parallelize almost any raster processing algorithm with any arbitrary neighborhood (or moving window) configuration. pRPL enables the implementation of parallel raster-processing algorithms without requiring a deep understanding of parallel computing and programming, thus it greatly reduces the development complexity. Moreover, even …


Comparison Of Modis And Avhrr 16-Day Normalized Difference Vegetation Index Composite Data, Kevin P. Gallo, Lei Ji, Brad Reed, John Dwyer, Jeffrey Eidenshink Jan 2004

Comparison Of Modis And Avhrr 16-Day Normalized Difference Vegetation Index Composite Data, Kevin P. Gallo, Lei Ji, Brad Reed, John Dwyer, Jeffrey Eidenshink

School of Natural Resources: Faculty Publications

Normalized difference vegetation index (NDVI) data derived from visible and near-infrared data acquired by the MODIS and AVHRR sensors were compared over the same time periods and a variety of land cover classes within the conterminous USA. The relationship between the AVHRR derived NDVI values and those of future sensors is critical to continued long term monitoring of land surface properties. The results indicate that the 16-day composite values are quite similar over the 23 intervals of 2001 that were analyzed, and a linear relationship exists between the NDVI values from the two sensors. The composite AVHRR NDVI data were …