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Full-Text Articles in Databases and Information Systems

Design And Implementation Of A Stand-Alone Tool For Metabolic Simulations, Milad Ghiasi Rad Dec 2017

Design And Implementation Of A Stand-Alone Tool For Metabolic Simulations, Milad Ghiasi Rad

Department of Computer Science and Engineering: Dissertations, Theses, and Student Research

In this thesis, we present the design and implementation of a stand-alone tool for metabolic simulations. This system is able to integrate custom-built SBML models along with external user’s input information and produces the estimation of any reactants participating in the chain of the reactions in the provided model, e.g., ATP, Glucose, Insulin, for the given duration using numerical analysis and simulations. This tool offers the food intake arguments in the calculations to consider the personalized metabolic characteristics in the simulations. The tool has also been generalized to take into consideration of temporal genomic information and be flexible for simulation …


Ancr—An Adaptive Network Coding Routing Scheme For Wsns With Different-Success-Rate Links †, Xiang Ji, Anwen Wang, Chunyu Li, Chun Ma, Yao Peng, Dajin Wang, Qingyi Hua, Feng Chen, Dingyi Fang Aug 2017

Ancr—An Adaptive Network Coding Routing Scheme For Wsns With Different-Success-Rate Links †, Xiang Ji, Anwen Wang, Chunyu Li, Chun Ma, Yao Peng, Dajin Wang, Qingyi Hua, Feng Chen, Dingyi Fang

Department of Computer Science Faculty Scholarship and Creative Works

As the underlying infrastructure of the Internet of Things (IoT), wireless sensor networks (WSNs) have been widely used in many applications. Network coding is a technique in WSNs to combine multiple channels of data in one transmission, wherever possible, to save node’s energy as well as increase the network throughput. So far most works on network coding are based on two assumptions to determine coding opportunities: (1) All the links in the network have the same transmission success rate; (2) Each link is bidirectional, and has the same transmission success rate on both ways. However, these assumptions may not be …


Iota Pi Application For Ios, Deborah Newberry Mar 2017

Iota Pi Application For Ios, Deborah Newberry

Computer Science and Software Engineering

Kappa Kappa Psi is a national honorary fraternity for college band members. They meet every Sunday night, and during these meetings they plan events (both internal and external) that aim to meet our goal of making sure that the Cal Poly band programs have their social, financial, material, and educational needs satisfied. This paper details the steps I took to create an application for them to use internally to help ease organizational processes.


Infographics: A Practical Guide For Librarians, Darren Sweeper Feb 2017

Infographics: A Practical Guide For Librarians, Darren Sweeper

Sprague Library Scholarship and Creative Works

No abstract provided.


Parsing Metamap Files In Hadoop, Amy Olex, Alberto Cano, Bridget T. Mcinnes Jan 2017

Parsing Metamap Files In Hadoop, Amy Olex, Alberto Cano, Bridget T. Mcinnes

Computer Science Publications

The UMLS::Association CUICollector module identifies UMLS Concept Unique Identifier bigrams and their frequencies in a biomedical text corpus. CUICollector was re-implemented in Hadoop MapReduce to improve algorithm speed, flexibility, and scalability. Evaluation of the Hadoop implementation compared to the serial module produced equivalent results and achieved a 28x speedup on a single-node Hadoop system.


Data Mining By Grid Computing In The Search For Extrasolar Planets, Oisin Creaner [Thesis] Jan 2017

Data Mining By Grid Computing In The Search For Extrasolar Planets, Oisin Creaner [Thesis]

Doctoral

A system is presented here to provide improved precision in ensemble differential photometry. This is achieved by using the power of grid computing to analyse astronomical catalogues. This produces new catalogues of optimised pointings for each star, which maximise the number and quality of reference stars available. Astronomical phenomena such as exoplanet transits and small-scale structure within quasars may be observed by means of millimagnitude photometric variability on the timescale of minutes to hours. Because of atmospheric distortion, ground-based observations of these phenomena require the use of differential photometry whereby the target is compared with one or more reference stars. …


Special Issue: Neutrosophic Theories Applied In Engineering, Florentin Smarandache, Jun Ye Jan 2017

Special Issue: Neutrosophic Theories Applied In Engineering, Florentin Smarandache, Jun Ye

Branch Mathematics and Statistics Faculty and Staff Publications

Neutrosophic sets and logic are generalizations of fuzzy and intuitionistic fuzzy sets and logic. Neutrosophic sets and logic are gaining significant attention in solving many real life decision making problems that involve uncertainty, impreciseness, vagueness, incompleteness, inconsistent, and indeterminacy. They have been applied in computational intelligence, multiple criteria decision making, image processing, medical diagnoses, etc. This Special Issue presents original research papers that report on state-of-the-art and recent advancements in neutrosophic sets and logic in soft computing, artificial intelligence, big and small data mining, decision making problems, and practical achievements.