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Full-Text Articles in Materials Chemistry
Propagating Conformational Changes Over Long (And Short) Distances In Proteins, Edward Yu, Daniel E. Koshland Jr.
Propagating Conformational Changes Over Long (And Short) Distances In Proteins, Edward Yu, Daniel E. Koshland Jr.
Edward Yu
The problem of the propagation of conformational changes over long distances or through a closely packed protein is shown to fit a model of a ligand-induced conformational change between two protein states selected by evolution. Moreover, the kinetics of the pathway between these states is also selected so that the energy of ligand binding and the speed of the transition between conformational states are physiologically appropriate. The crystallographic data of a wild-type aspartate receptor that has negative cooperativity and a mutant that has no cooperativity but has native transmembrane signaling are shown to support this model.
Structural Change Of The Mn Cluster During The S2→S3 State Transition Of The Oxygen-Evolving Complex Of Photosystem Ii. Does It Reflect The Onset Of Water/Substrate Oxidation? Determination By Mn X-Ray Absorption Spectroscopy, Wenchuan Liang, Theo A. Toelofs, Roehl M. Cinco, Annette Rompel, Matthew J. Latimer, Edward Yu, Kenneth Sauer, Melvin P. Klein, Vittal K. Yachandra
Structural Change Of The Mn Cluster During The S2→S3 State Transition Of The Oxygen-Evolving Complex Of Photosystem Ii. Does It Reflect The Onset Of Water/Substrate Oxidation? Determination By Mn X-Ray Absorption Spectroscopy, Wenchuan Liang, Theo A. Toelofs, Roehl M. Cinco, Annette Rompel, Matthew J. Latimer, Edward Yu, Kenneth Sauer, Melvin P. Klein, Vittal K. Yachandra
Edward Yu
The oxygen-evolving complex of Photosystem II in plants and cyanobacteria catalyzes the oxidation of two water molecules to one molecule of dioxygen. A tetranuclear Mn complex is believed to cycle through five intermediate states (S0−S4) to couple the four-electron oxidation of water with the one-electron photochemistry occurring at the Photosystem II reaction center. We have used X-ray absorption spectroscopy to study the local structure of the Mn complex and have proposed a model for it, based on studies of the Mn K-edges and the extended X-ray absorption fine structure of the S1 and S2 states. The proposed model consists of …
Ionic Hydrogen Bonds In Bioenergetics. 3. Proton Transport In Membranes, Modeled By Ketone/Water Clusters, Michael Meot-Ner, Steve Scheiner, Edward Yu
Ionic Hydrogen Bonds In Bioenergetics. 3. Proton Transport In Membranes, Modeled By Ketone/Water Clusters, Michael Meot-Ner, Steve Scheiner, Edward Yu
Edward Yu
Hydrogen bond networks in protonated acetone/water clusters are stabilized by H3O+(Me2CO)2 centers, and the stabilizaton increases with further acetone content. For example, proton transfer from neat water (H2O)6H+ clusters to form mixed (Me2CO)3(H2O)3H+ clusters is exothermic by 80 kJ/mol (19 kcal/mol), due to strong hydrogen bonding of the carbonyl groups; in a series of mixed clusters B3(H2O)3H+, the stability of the hydrogen bond network correlates with the proton affinities PA(B). In diketone models of adjacent peptide links, the proton is stabilized by internal hydrogen bonds between the carbonyl groups. The internal bonds can be significant, for example, 31 kJ/mol (7 …
The S0 State Of The Oxygen-Evolving Complex In Photosystem Ii Is Paramagnetic: Detection Of An Epr Multiline Signal, Johannes Messinger, John H. Robblee, Edward Yu, Kenneth Sauer, Vittal K. Yachandra, Melvin P. Klein
The S0 State Of The Oxygen-Evolving Complex In Photosystem Ii Is Paramagnetic: Detection Of An Epr Multiline Signal, Johannes Messinger, John H. Robblee, Edward Yu, Kenneth Sauer, Vittal K. Yachandra, Melvin P. Klein
Edward Yu
The photosynthetic oxidation of water to molecular oxygen is energetically driven by light-induced charge separations in the reaction center of photosystem II (PS II). The reaction is catalyzed by a tetranuclear manganese cluster contained in the oxygen-evolving complex (OEC). The OEC cycles through five different redox states termed S0 to S4, with S1 being the darkstable state. Oxygen is released during the S4 f S0 transition.1 The removal of one electron from the OEC on each S state transition leads to the idea that alternate S states should be paramagnetic because of their odd-electron number. The multiline EPR signal, which …
Synthesis And Characterization Of A New Class Of Μ3-Oh-Bridged Trimers That Contain Octahedrally Coordinated Divalent Metal Ions Bridged By Three Acetate Ligands And A Unique Catecholate Ligand. Solid State Molecular Structures Of The [(Py)5mii3(Oac)3(Μ3-Oh)((Cat)] Complexes (M = Mn(Ii), Fe(Ii), Co(Ii), Ni(Ii)), R.A. Reynolds, Edward Yu, W.R. Dunham, D. Coucouvanis
Synthesis And Characterization Of A New Class Of Μ3-Oh-Bridged Trimers That Contain Octahedrally Coordinated Divalent Metal Ions Bridged By Three Acetate Ligands And A Unique Catecholate Ligand. Solid State Molecular Structures Of The [(Py)5mii3(Oac)3(Μ3-Oh)((Cat)] Complexes (M = Mn(Ii), Fe(Ii), Co(Ii), Ni(Ii)), R.A. Reynolds, Edward Yu, W.R. Dunham, D. Coucouvanis
Edward Yu
The synthesis and structural characterization of a new class of “basic” trinuclear acetate clusters with solely divalent metal ions and a central μ3-OH ligand are reported. These molecules with the [(py)5MII3(OAc)3(μ3-OH)(cat)] stoichiometry (M = Mn, Fe, Co, Ni) are X-ray isomorphous and isostructural and contain octahedrally coordinated metal ions. The core consists of an antiferromagnetically coupled M3 unit with the metals arranged in the corners of an isosceles triangle. Two of the M−M distances vary between 2.98 and 3.16 Å, and the longer M−M distance is observed between 3.65 and 3.76 Å. As expected from the relative ionic radius lengths, …
Absolute Integrated Cross Sections For Some O2 Herzberg I Transitions Near 248–249 Nm, Zhen-Chuan Bao, Edward Yu, John R. Baker
Absolute Integrated Cross Sections For Some O2 Herzberg I Transitions Near 248–249 Nm, Zhen-Chuan Bao, Edward Yu, John R. Baker
Edward Yu
A frequency doubled tunable dye laser system with ∼0.4 cm−1 resolution was used to measure the integrated absorption cross sections of more than 20 rotational transitions in the O2 Herzberg I (A 3Σ+ u ←X 3Σ− g ) 8‐0 and 9‐0 vibrational bands near 248 nm and 249 nm. Oxygen pressures from 200 to 800 Torr and path lengths from 5 to 25 m were employed. The measured absorbances were fitted using a nonlinear least squares analysis and Beer’s Law to obtain absolute values for the individual transition integrated cross sections in good agreement with a recent spectral simulation and …