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Full-Text Articles in Ordinary Differential Equations and Applied Dynamics

Analytic Solutions For Diffusion On Path Graphs And Its Application To The Modeling Of The Evolution Of Electrically Indiscernible Conformational States Of Lysenin, K. Summer Ware Dec 2020

Analytic Solutions For Diffusion On Path Graphs And Its Application To The Modeling Of The Evolution Of Electrically Indiscernible Conformational States Of Lysenin, K. Summer Ware

Boise State University Theses and Dissertations

Memory is traditionally thought of as a biological function of the brain. In recent years, however, researchers have found that some stimuli-responsive molecules exhibit memory-like behavior manifested as history-dependent hysteresis in response to external excitations. One example is lysenin, a pore-forming toxin found naturally in the coelomic fluid of the common earthworm Eisenia fetida. When reconstituted into a bilayer lipid membrane, this unassuming toxin undergoes conformational changes in response to applied voltages. However, lysenin is able to "remember" past history by adjusting its conformational state based not only on the amplitude of the stimulus but also on its previous …


Analytical Upstream Collocation Solution Of A Quadratic Forced Steady-State Convection-Diffusion Equation, Eric Paul Smith May 2009

Analytical Upstream Collocation Solution Of A Quadratic Forced Steady-State Convection-Diffusion Equation, Eric Paul Smith

Boise State University Theses and Dissertations

In this thesis we present the exact solution to the Hermite collocation discretization of a quadratically forced steady-state convection-diffusion equation in one spatial dimension with constant coeffcients, defined on a uniform mesh, with Dirichlet boundary conditions. To improve the accuracy of the method we use \upstream weighting" of the convective term in an optimal way. We also provide a method to determine where the forcing function should be optimally sampled. Computational examples are given, which support and illustrate the theory of the optimal sampling of the convective and forcing term.