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Full-Text Articles in Plant Biology

Sequencing Antisense Transcriptome Of Populus Through Antisense/Sense Transcript Pair Enrichment, Emma V. Burke Jan 2023

Sequencing Antisense Transcriptome Of Populus Through Antisense/Sense Transcript Pair Enrichment, Emma V. Burke

Dissertations, Master's Theses and Master's Reports

Past transcriptome research on plants focused primarily on protein coding genes, and only recently researchers began looking into the non-protein coding regions that may play significant roles in gene regulation. Antisense RNA transcripts that are found naturally in the cell share complementary sequence with sense transcripts and have been shown to regulate expression of their sense counterparts. Since antisense RNA has been largely under-studied and difficult to sequence because of their low relative abundance, new methods are needed to target antisense RNA for efficient genome-wide profiling. To address this gap in methods to efficiently and cost effectively enrich antisense RNA …


Common Garden Study Reveals Frost-Tolerant, Generalist Northern Seed Sources Are Best Suited To Expand Range Of Quercus Rubra, Emily Lindback Jan 2022

Common Garden Study Reveals Frost-Tolerant, Generalist Northern Seed Sources Are Best Suited To Expand Range Of Quercus Rubra, Emily Lindback

Dissertations, Master's Theses and Master's Reports

Climate change is shifting the potential suitable range of northern red oak (Quercus rubra L.) faster than it can migrate, creating an adaptation lag. Quercus rubra is prominent in eastern North American forests and important for its carbon sequestration, ecological roles, and economic significance. Our study addresses which populations of Q. rubra are best suited for climatic conditions at the northern and central range limits. Our findings can inform forestry management policies such as assisted migration, where species are transferred within their native range to mitigate the effects of climate change. We planted over 800 Q. rubra seedlings …


Application Of Short Tandem Target Mimic (Sttm) Technique For Functional Analysis Of Micro-Rna396 In Transgenic Poplar Trees, Surattana Boonsai Jan 2019

Application Of Short Tandem Target Mimic (Sttm) Technique For Functional Analysis Of Micro-Rna396 In Transgenic Poplar Trees, Surattana Boonsai

Dissertations, Master's Theses and Master's Reports

Short Tandem Target Mimic (STTM) is a commonly technique used for functional studies of a number of genes in several plant model systems. However, very little is known about application of STTM technique in tree species. In this study, STTM was applied to knock down microRNA396 (miR396) in transgenic poplar trees for the first time. STTM396 expression resulted in dramatic decrease in miR396 expression levels leading to taller plants with larger leaves and larger leaf cell size. Additionally, an expression analysis of growth regulating factor genes (GRFs) that are members of miR396 target gene family showed up-regulation of GRF07 gene …


Effects Of In-Situ Leaf-Level Canopy Warming In A Northern Hardwood Forest, Kelsey Carter Jan 2017

Effects Of In-Situ Leaf-Level Canopy Warming In A Northern Hardwood Forest, Kelsey Carter

Dissertations, Master's Theses and Master's Reports

Rising mean annual temperatures due to climate change have intensified the need to understand the effects of warming on plant physiological processes. Forest photosynthesis is the most important pathways of terrestrial carbon sequestration, yet continued warming could reduce this important carbon sink. Photosynthesis is highly sensitive to temperature and begins to decline after an optimum temperature (Topt) is reached, leading to reduced carbon uptake. To date, logistical difficulties have limited our ability to test photosynthetic responses to sustained warming in mature forest canopies. In order to understand how elevated temperatures will affect forest ecosystems, we need to be …