Agronomy and Crop Sciences Commons^™

Expertos Analizan Impacto Del Cambio Climático En Granos Básicos Y Sorgos Forrajeros En El Salvador, Kimberly Christiansen

INTSORMIL Impacts and Bulletins

En el evento participan profesionales de El Salvador, así como de las universidades de Kansas State y Purdue, de Estados Unidos.

Exponer y analizar los principales efectos derivados del cambio climático en los cultivos de El Salvador, así como el impacto que ha tenido la adopción de variedades forrajeras de sorgo en el país, son los objetivos principales de los foros realizados este miércoles por el Centro Nacional de Tecnología Agropecuaria y Forestal “Enrique Álvarez Córdova” (CENTA) con apoyo del Instituto Internacional de Sorgo, Mijo y otros granos (INTSORMIL).

Heritable Epigenetic Variation Among Maize Inbreds, Steve R. Eichten, Ruth A. Swanson, James C. Schnable, Amanda J. Waters, Peter J. Hermanson, Sanzhen Liu, Cheng-Ting Yeh, Yi Jia, Karla Gendler, Michael Freeling, Patrick S. Schnable, Matthew W. Vaughn, Nathan M. Springer

Department of Agronomy and Horticulture: Faculty Publications

Epigenetic variation describes heritable differences that are not attributable to changes in DNA sequence. There is the potential for pure epigenetic variation that occurs in the absence of any genetic change or for more complex situations that involve both genetic and epigenetic differences. Methylation of cytosine residues provides one mechanism for the inheritance of epigenetic information. A genome-wide profiling of DNA methylation in two different genotypes of Zea mays (ssp. mays), an organism with a complex genome of interspersed genes and repetitive elements, allowed the identification and characterization of examples of natural epigenetic variation. The distribution of DNA methylation …

From The Dean And Director, Gary Pierzynski

INTSORMIL Impacts and Bulletins

This issue of the Ag Report has an international theme. It features our efforts to train the Kansas National Guard agribusiness development teams deploying to Afghanistan and some of our international activities in Africa.

Grain Science Honors Alumni And Industry Leaders, Gloria Holcombe

INTSORMIL Impacts and Bulletins

The Department of Grain Science and Industry recognized eight distinguished individuals at its spring luncheon.

Outstanding Service Awards were presented to Aaron Harries, John Khoury,John Mathew, and Jim Rempe. Outstanding Alumni Awards went to Fred Merrill, Bill Pursley, Dale Rodman, and Lloyd Rooney.

Borlaug Fellowship Opens Doors For Rachel Opole [Student Accolades], Mary Lou Peter

INTSORMIL Impacts and Bulletins

Rachel Opole grew up in Nairobi, Kenya’s capitol, and the K-State doctoral student developed an early interest in livestock and crop production. Those interests, largely influenced by her parents, inspired her desire to improve crops grown to feed people. To enhance her work in that area, Opole earned the Norman E. Borlaug Leadership Enhancement in Agriculture Program (LEAP) fellowship, administered by the University of California–Davis.

Plant Pathologist And Grain Scientist Earn K-State’S Highest Honor, Gloria Holcombe

INTSORMIL Impacts and Bulletins

Two innovative College of Agriculture faculty — John Leslie, professor and head of the Department of Plant Pathology, and Xiuzhi “Susan” Sun, professor of grain science and industry — were selected university distinguished professors, a lifetime title and the highest honor K-State bestows on its faculty.

Beneficial Partnerships: K-Staters Conduct Projects Throughout Africa, Gloria Holcombe, Timothy Dalton

INTSORMIL Impacts and Bulletins

Africa grows many of the same crops as Kansas, including sorghum and wheat. In fact, sorghum germplasm came from Africa, and now Kansas is the No. 1 sorghum producer in the United States.

K-State has expertise in grain storage issues, wheat and grain sorghum milling, and growing crops under dryland and irrigated conditions — vital information for African producers. Faculty secure grant funding to cover travel and other expenses associated with these partnerships. As an added bonus, they bring international experience into the classroom to share with their students. International collaborations help develop networks to share research, establish new markets, …

Miscanthus 3 Giganteus Productivity: The Effects Of Management In Different Environments, Matt Maughan, German Bollero, D.K. Lee, Robert Darmody, Stacy Bonos, Laura Cortese, James Murphy, Roch E. Gaussoin, Matthew Sousek, David Williams, Linda Williams, Fernando Miguez, Thomas Voigt

Department of Agronomy and Horticulture: Faculty Publications

Miscanthus 9 giganteus is a C4 perennial grass that shows great potential as a high-yielding biomass crop. Scant research has been published that reports M. 9 giganteus growth and biomass yields in different environments in the United States. This study investigated the establishment success, plant growth, and dry biomass yield of M. 9 giganteus during its first three seasons at four locations (Urbana, IL; Lexington, KY; Mead, NE; Adelphia, NJ) in the United States. Three nitrogen rates (0, 60, and 120 kg ha -1) were applied at each location each year. Good survival of M. 9 giganteus during its first …

Gata-Family Transcription Factors In Magnaporthe Oryzae, Cristian F. Quispe

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

The filamentous fungus, Magnaporthe oryzae, responsible for blast rice disease, destroys around 10-30% of the rice crop annually. Infection begins when the specialized infection structure, the appressorium, generates enormous internal turgor pressure through the accumulation of glycerol. This turgor acts on a penetration peg emerging at the base of the cell, causing it to breach the leaf surface allowing its infection.

The enzyme trehalose-6- phosphate synthase (Tps1) is a central regulator of the transition from appressorium development to infectious hyphal growth. In the first chapter we show that initiation of rice blast disease requires a regulatory mechanism involving an …

Herbicide-Resistant Risk Assessment: Response Of Common Nebraska Weeds To Dicamba Dose, Roberto J. Crespo

Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research

Dicamba-resistant soybeans are being developed to provide an additional herbicide mechanism of action that can be used in soybean, and to provide a tool to help manage or mitigate the evolution of other herbicide-resistant weed populations. The objectives of this thesis were to assess the risk of common Nebraska weeds developing resistance to dicamba, quantify baseline dose-response to dicamba of high-risk weed species, and survey the variability in dicamba dose-response among populations of those species. Twenty-five weed scientists were asked to estimate the risk likelihood of ten weed species evolving resistance to dicamba following the commercialization of dicamba-resistant soybean. Palmer …

Grinders Convert Sorghum Into Flour, Intsormil

INTSORMIL Impacts and Bulletins

To help contend rising wheat costs Central American bakers are looking for alternative ways to produce their baked products at a low cost without sacrificing nutritional value or taste. Sorghum flour is the answer to their problems. Sorghum flour is about half the cost of wheat flour so using sorghum flour helps bakers save money and make more of a profit. Particle size of sorghum flour must be sufficiently fine in order to substitute for wheat flour in baking recipes. However, small grinders adequate for family level bakers have not been available in Central America. That is until a collaborative …

Uso De Molinos Cti Para La Produccion Y Uso De Harina De Sorgo, Intsormil

INTSORMIL Impacts and Bulletins

Para ayudar a lidiar con el aumento de los costos de trigo en Centro América, los panaderos están buscando formas alternativas para producir sus productos de panadería a un bajo costo sin sacrificar el valor nutritivo o sabor. La harina de sorgo es la respuesta a sus problemas. La harina de sorgo es de aproximadamente la mitad del costo de la harina de trigo, por lo que usar harina de sorgo puede ayudar a los panaderos a ahorrar dinero y disminuir costos de produccion. El tamaño de partícula de la harina de sorgo debe ser lo suficientemente fino como para …

Screening Synteny Blocks In Pairwise Genome Comparisons Through Integer Programming, Haibao Tang, Eric Lyons, Brent S. Pedersen, James C. Schnable, Andrew H. Paterson, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Background:

It is difficult to accurately interpret chromosomal correspondences such as true orthology and paralogy due to significant divergence of genomes from a common ancestor. Analyses are particularly problematic among lineages that have repeatedly experienced whole genome duplication (WGD) events. To compare multiple “subgenomes” derived from genome duplications, we need to relax the traditional requirements of “one-to-one” syntenic matchings of genomic regions in order to reflect “one-to-many” or more generally “many-to-many” matchings. However this relaxation may result in the identification of synteny blocks that are derived from ancient shared WGDs that are not of interest. For many downstream analyses, we …

Malian Thick Porridges And Satiety, Intsormil

INTSORMIL Impacts and Bulletins

A study was recently conducted through INTSORMIL (Purdue Hamaker Project) to examine thick sorghum millet consumption related to preference and satiation in the Sikasso, Segou and Mopti regions of Mali. This is part of a larger study to understand the effect of thick porridges, and delayed glucose delivery to the body, on satiety and overall food consumption.

The conclusions from the following data is that porridges (tô) are generally eaten more frequently and are consumed in a thicker consistency in the villages (Figures 1 and 2), and are very satiating (Figure 3 thicker porridges correlated with lower hunger scores at …

A First Insight Into Population Structure And Linkage Disequilibrium In The U.S. Peanut Minicore Collection, Vikas Belamkar, Michael Gomez Selvaraj, Jamie L. Ayers, Paxton R. Payton, Naveen Puppala, Mark D. Burow

Department of Agronomy and Horticulture: Faculty Publications

Knowledge of genetic diversity, population structure, and degree of linkage disequilibrium (LD) in target association mapping populations is of great importance and is a prerequisite for LD-based mapping. In the present study, 96 genotypes comprising 92 accessions of the US peanut minicore collection, a component line of the tetraploid variety Florunner, diploid progenitors A. duranensis (AA) and A. ipaënsis (BB), and synthetic amphidiploid accession TxAG-6 were investigated with 392 simple sequence repeat (SSR) marker bands amplified using 32 highly-polymorphic SSR primer pairs. Both distance- and model-based (Bayesian) cluster analysis revealed the presence of structured diversity. In general, the wild-species accessions …

Genes Identified By Visible Mutant Phenotypes Show Increased Bias Toward One Of Two Subgenomes Of Maize, James C. Schnable, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Not all genes are created equal. Despite being supported by sequence conservation and expression data, knockout homozygotes of many genes show no visible effects, at least under laboratory conditions. We have identified a set of maize (Zea mays L.) genes which have been the subject of a disproportionate share of publications recorded at MaizeGDB. We manually anchored these ‘‘classical’’ maize genes to gene models in the B73 reference genome, and identified syntenic orthologs in other grass genomes. In addition to proofing the most recent version 2 maize gene models, we show that a subset of these genes, those that …

Dose–Sensitivity, Conserved Non-Coding Sequences, And Duplicate Gene Retention Through Multiple Tetraploidies In The Grasses, James C. Schnable, Brent S. Pedersen, Sabarinath Subramaniam, Michael Freeling

Department of Agronomy and Horticulture: Faculty Publications

Whole genome duplications, or tetraploidies, are an important source of increased gene content. Following whole genome duplication, duplicate copies of many genes are lost from the genome. This loss of genes is biased both in the classes of genes deleted and the subgenome from which they are lost. Many or all classes are genes preferentially retained as duplicate copies are engaged in dose sensitive protein–protein interactions, such that deletion of any one duplicate upsets the status quo of subunit concentrations, and presumably lowers fitness as a result. Transcription factors are also preferentially retained following every whole genome duplications studied. This …

Inta Segovia, A New Sorghum Variety For The Dry Zones Of Nicaragua, Intsormil

INTSORMIL Impacts and Bulletins

The Sandanista Government through the Instituto Nicaraguense de Tecnologia (INTA) officially released the new improved sorghum variety, INTA Segovia on January 14, 2011. This improved variety will benefit the resource-poor farmers that grow sorghum on the hillsides (see photo) in dry zones (40 percent of the land area in Nicaragua). This variety will have a significant economic impact in Nicaragua and in neighboring countries as it produces well in drought prone areas which lack sufficient rainfall for growing maize. INTA Segovia, under drought conditions, produces higher yields than currently grown sorghum varieties. Drought tolerance is due to the large root …

Instalan Molino Para Producir Harina De Sorgo: Con Este Molino Se Prevé Procesar, Al Mes, Alrededor De 48 Quintales De Harina, Berta Nely Menjívar

INTSORMIL Impacts and Bulletins

Panificadores de la Asociación Cooperativa de Cuscatlán (ACPACUS de R. L.), aglutinados en la Mesa Nacional de Panificadores de El Salvador (MENAPAES), en compañía de autoridades del Centro Nacional de Tecnología Agropecuaria y Forestal Enrique Álvarez Córdova (CENTA) y del Instituto para la Investigación del Sorgo y Mijo (INTSORMIL), inauguraron la puesta en marcha del primer molino de martillo, con el cual estarán procesando harina de sorgo (maicillo) para utilizarla en la industria de la panificación.

La adquisición de este molino es uno de los primeros esfuerzos de la MENAPAES en la búsqueda de otras materias primas para la producción …

Sorghum And Millet Research Program Receives Grant, Daily Nebraskan

INTSORMIL Impacts and Bulletins

The International Sorghum and Millet Collaborative Research Support Program (INTSORMIL) at the University of Nebraska-Lincoln recently received a $1.1 million grant to work with Central American countries to increase sorghum foliage.

Intsormil Information, Daily Nebraskan

INTSORMIL Impacts and Bulletins

The International Sorghum and Millet Collaborative Research Support Program (INTSORMIL) at the University of Nebraska-Lincoln recently received at $1.1 million grant to work with Central American countries to increase sorghum foliage.

Report Of Nine Sorghum Flour Workshops, Report For Intsormil; Subject: “Utilization Of Cti Grinders For Small Scale Sorghum Flour Production In Central America”, Intsormil

INTSORMIL Scientific Publications

In Nicaragua, Sorghum grain has been a crops using only for animal feed. Fortunately Scientifics have been researched about its nutritional sorghum grain properties and some of the country that they have been interested to bring the technology about sorghum flour has been Nicaragua because its growths in 3 big areas; in the north, south and west region. Now, that is knew their characteristics and others, so INTA and INTSORMIL are diffusing the technology about sorghum flour to increase the production of sorghum grain, reduce the cost production of bread and some ethnics drinks, to improve the food security and …

Switchgrass, Kenneth P. Vogel, Gautam Sarath, Aaron J. Saathoff, Robert B. Mitchell

Department of Agronomy and Horticulture: Faculty Publications

17.1 Introduction

Switchgrass (Panicum virgatum L.) is a warm-season perennial grass that is native to North America that is being developed into a biomass energy crop. It has been used in pastures and for conservation purposes in the Great Plains and the Midwest, USA, for over 70 years.1 The research supporting its use as a pasture and conservation species was largely conducted by US Department of Agriculture (USDA) research programs, most notably the Agricultural Research Service (ARS) project located at the University of Nebraska-Lincoln and USDA Plant Materials Centers that are located throughout the United States. In this report, …

Soil Fertility And Crop Yields In Long-Term Organic And Conventional Cropping Systems In Eastern Nebraska, Samuel E. Wortman, Tomie D. Galusha, Stephen C. Mason, Charles A. Francis

Department of Agronomy and Horticulture: Faculty Publications

Organic agriculture aims to build soil quality and provide long-term benefits to people and the environment; however, organic practices may reduce crop yields. This long-term study near Mead, NE was conducted to determine differences in soil fertility and crop yields among conventional and organic cropping systems between 1996 and 2007. The conventional system (CR) consisted of corn (Zea mays L.) or sorghum (Sorghum bicolor (L.) Moench)–soybean (Glycine max (L.) Merr.)–sorghum or corn–soybean, whereas the diversified conventional system (DIR) consisted of corn or sorghum– sorghum or corn–soybean–winter wheat (wheat, Triticum aestivum L.). The animal manure-based organic system (OAM) …

The Composition And Origins Of Genomic Variation Among Individuals Of The Soybean Reference Cultivar Williams 82, William J. Haun, D. L. Hyten, Wayne W. Xu, Daniel J. Gerhardt, Thomas J. Albert, Todd Richmond, Jeffrey A. Jeddeloh, Gaofeng Jia, Nathan M. Springer, Carroll P. Vance, Robert M. Stupar

Department of Agronomy and Horticulture: Faculty Publications

Soybean (Glycine max) is a self-pollinating species that has relatively low nucleotide polymorphism rates compared with other crop species. Despite the low rate of nucleotide polymorphisms, a wide range of heritable phenotypic variation exists. There is even evidence for heritable phenotypic variation among individuals within some cultivars. Williams 82, the soybean cultivar used to produce the reference genome sequence, was derived from backcrossing a Phytophthora root rot resistance locus from the donor parent Kingwa into the recurrent parent Williams. To explore the genetic basis of intracultivar variation, we investigated the nucleotide, structural, and gene content variation of different …

Identification Of A Second Asian Soybean Rust Resistance Gene In Hyuuga Soybean, Mandy D. Kendrick, Donna K. Harris, Bo-Keun Ha, D. L. Hyten, P. B. Cregan, Reid D. Frederick, H. Roger Boerma, Kerry F. Pedley

Department of Agronomy and Horticulture: Faculty Publications

Asian soybean rust (ASR) is an economically significant disease caused by the fungus Phakopsora pachyrhizi. The soybean genes Rpp3 and Rpp?(Hyuuga) confer resistance to specific isolates of the pathogen. Both genes map to chromosome 6 (Gm06) (linkage group [LG] C2). We recently identified 12 additional soybean accessions that harbor ASR resistance mapping to Gm06, within 5 centimorgans of Rpp3 and Rpp?(Hyuuga). To further characterize genotypes with resistance on Gm06, we used a set of eight P. pachyrhizi isolates collected from geographically diverse areas to inoculate plants and evaluate them for differential phenotypic responses. …

Genome-Wide Association Analysis Identifies Candidate Genes Associated With Iron Deficiency Chlorosis In Soybean, Sujan Mamidi, Shireen Chikara, R. Jay Goos, D. L. Hyten, Deepti Annam, Samira Mafi Moghaddam, Rian K. Lee, P. B. Cregan, Phillip E. Mcclean

Department of Agronomy and Horticulture: Faculty Publications

Iron deficiency chlorosis (IDC) is a significant yield-limiting problem in several major soybean [Glycine max (L.) Merr.] production regions in the United States. Soybean plants display a variety of symptoms that range from a slight yellowing of the leaf to interveinal chlorosis, to stunted growth that reduces yield. The objective of this analysis was to employ single nucleotide polymorphism (SNP)-based genome-wide association mapping to uncover genomic regions associated with IDC tolerance. Two populations [2005 (n = 143) and 2006 (n = 141)] were evaluated in replicated, multilocation IDC trials. After controlling for population structure and individual relatedness, and selecting …

Moving Magnesium In Plant Cells, Brian M. Waters

Department of Agronomy and Horticulture: Faculty Publications

Magnesium (Mg) is among the most abundant mineral elements in plants, yet the knowledge of which genes control its accumulation in specific tissues and organelles lags behind that of many other mineral elements. Only in recent years has identification of important molecular players begun to take shape. In this issue of New Phytologist, Conn et al. (pp. 583–594) shed additional light on two Mg transporters that play important roles in accumulation of Mg in leaf cell vacuoles. Using subcellular-level ion measurements on leaves, gene expression measurements after single-cell sampling, a genetic approach, and clever use of calcium (Ca) and …

Registration Of Seven Winter Wheat Germplasm Lines Carrying The Wsm1 Gene For Wheat Streak Mosaic Virus Resistance, Jasdeep S. Mutti, P. Stephen Baenziger, Robert A. Graybosch, Roy French, Kulvinder S. Gill

Department of Agronomy and Horticulture: Faculty Publications

Seven winter wheat (Triticum aestivum L.) germplasm lines carrying the Wsm1 gene conferring resistance to Wheat streak mosaic virus (WSMV)—Alliance-Wsm1 (Reg. No. GP-858, PI 653710), Arrowsmith-Wsm1 (Reg. No. GP-859, PI 653711), Goodstreak-Wsm1 (Reg. No. GP-860, PI 653712), Harry-Wsm1 (Reg. No. GP-861, PI 653713), Millennium-Wsm1 (Reg. No. GP-862, PI 653714), Wahoo-Wsm1 (Reg. No. GP-863, PI 653715), and Wesley-Wsm1 (Reg. No. GP-864, PI 653716)—were codeveloped by Washington State University, Pullman, WA; the University of Nebraska, Lincoln, NE; and the USDA-ARS. These seven different winter wheat cultivars were selected to provide more sources of effective …

Cytokinin-Mediated Source ⁄Sink Modifications Improve Drought Tolerance And Increase Grain Yield In Rice Under Water-Stress, Zvi Peleg, Maria Reguera, Ellen Tumimbang, Harkamal Walia, Eduardo Blumwald

Department of Agronomy and Horticulture: Faculty Publications

Drought is the major environmental factor limiting crop productivity worldwide. We hypothesized that it is possible to enhance drought tolerance by delaying stress-induced senescence through the stress-induced synthesis of cytokinins in crop-plants. We generated transgenic rice (Oryza sativa) plants expressing an isopentenyltransferase (IPT) gene driven by PSARK, a stress- and maturation-induced promoter. Plants were tested for drought tolerance at two yield-sensitive developmental stages: pre- and post-anthesis. Under both treatments, the transgenic rice plants exhibited delayed response to stress with significantly higher grain yield (GY) when compared to wild-type plants. Gene expression analysis revealed a significant shift in expression of hormone-associated …