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Articles 31 - 60 of 131
Full-Text Articles in Plant Sciences
Yield And Composition Of Forage Maize: Interaction Of Harvest Date, Cultivar And Plastic Mulch, E. M. Little, P. O'Kiely, J. C. Crowley, G. P. Keane
Yield And Composition Of Forage Maize: Interaction Of Harvest Date, Cultivar And Plastic Mulch, E. M. Little, P. O'Kiely, J. C. Crowley, G. P. Keane
IGC Proceedings (1993-2023)
Forage maize is established as a crop with the potential to consistently supply high yields of quality forage on some Irish farms. Despite its success, considerable variability in crop yield, quality and maturity at harvest can exist from year to year. These reflect differing prevailing weather conditions, particularly temperature during May to September. The use of plastic mulch has increased the likelihood of achieving higher yields of high quality crops and has permitted maize production to extend into areas once considered unsuitable for the crop. In this experiment two cultivars of differing maturity were grown with or without plastic mulch …
Fermentation Characteristics Of Maize/Sesbania Bi-Crop Silage, M. Kondo, J. Yanagisawa, K. Kita, H. Yokota
Fermentation Characteristics Of Maize/Sesbania Bi-Crop Silage, M. Kondo, J. Yanagisawa, K. Kita, H. Yokota
IGC Proceedings (1993-2023)
Maize is one of the main forages for dairy production and is a suitable material for silage making because of high fermentable carbohydrates, high counts of lactic acid bacteria (LAB) and low buffering capacity (BC) (Nishino et al. 2003; McDonald et al. 1991). Whole crop maize silage is high in energy but low in crude protein (CP). On the other hand, legumes are high in CP but difficult to conserve because of their low water soluble carbohydrates (WSC) and high BC. It might be possible that maize/legume bi-crop silage compensate for their negative points. Sesbania is a legume originated …
An Evaluation Of The Inclusion Of Alternative Forages With Grass Silage-Based Diets On Carcass Composition And Meat Quality Of Beef Cattle Offered Two Contrasting Grass Silages, T. W. J. Keady, F. O. Lively, D. J. Kilpatrick, B. W. Moss
An Evaluation Of The Inclusion Of Alternative Forages With Grass Silage-Based Diets On Carcass Composition And Meat Quality Of Beef Cattle Offered Two Contrasting Grass Silages, T. W. J. Keady, F. O. Lively, D. J. Kilpatrick, B. W. Moss
IGC Proceedings (1993-2023)
Recent studies have shown that the inclusion of some alternative forages with grass silage-based diets can increase animal performance of beef cattle. The aim of the present study was to evaluate the effects of including either maize or whole crop wheat (WCW) silages with grass silage-based diets on meat quality of beef cattle offered two levels of concentrate.
Comparison Of Different Maize Hybrids Cultivated And Fermented With Or Without Sorghum, Sz. Orosz, Z. Bellus, Zs. Kelemen, E. Zerényi, J. Helembai
Comparison Of Different Maize Hybrids Cultivated And Fermented With Or Without Sorghum, Sz. Orosz, Z. Bellus, Zs. Kelemen, E. Zerényi, J. Helembai
IGC Proceedings (1993-2023)
In Hungary our key forage crop is silage maize, however, the joint growing of maize and sorghum is increasingly important in arid regions. The reason is, that sorghum varieties tolerate well the various ecological stresses (drought). The joint growing of maize and sorghum varieties has several advantages and disadvantageous in respect of yields, safety of production, fermentability of the crop and nutrient content of the silage. The basis of realising the complementary qualities of the two crops and of the successful joint growing and preservation is the suitable pairing of hybrid varieties.
On Correlation Between Canopy Vegetation And Growth Indexes Of Maize Varieties With Different Nitrogen Efficiencies, Xia Zhao, Shuaili Wang, Tao Wen, Jiamin Xu, Bao Huang, Shufeng Yan, Gangqiang Gao, Yali Zhao, Hongping Li, Jiangfang Qiao, Jinliang Yang, Lianhai Wu, Hongwei Wang, Tianxue Liu, Xinyuan Mu
On Correlation Between Canopy Vegetation And Growth Indexes Of Maize Varieties With Different Nitrogen Efficiencies, Xia Zhao, Shuaili Wang, Tao Wen, Jiamin Xu, Bao Huang, Shufeng Yan, Gangqiang Gao, Yali Zhao, Hongping Li, Jiangfang Qiao, Jinliang Yang, Lianhai Wu, Hongwei Wang, Tianxue Liu, Xinyuan Mu
Department of Agronomy and Horticulture: Faculty Publications
Studying the canopy spectral reflection characteristics of different N-efficient maize varieties and analyzing the relationship between their growth indicators and spectral vegetation indices can help the breeding and application of N-efficient maize varieties. To achieve the optimal management of N fertilizer resources, developing N-efficient maize varieties is necessary. In this research, maize varieties, i.e., the low-N-efficient (Zhengdan 958, ZD958), the high-N efficient (Xianyu 335, XY335), the double-high varieties (Qiule 368, QL368), and the double inefficient-type varieties (Yudan 606 YD606), were used as materials. Results indicate that nitrogen fertilization significantly increased the vegetation indices NDVI, GNDVI, GOSAVI, and RVI of maize …
Performance Of Corn Hybrids With Contrasting Maturity In Northeastern Kansas, L. N. Lingua, I. Massigoge, A. J. P. Carcedo, I. A. Ciampitti
Performance Of Corn Hybrids With Contrasting Maturity In Northeastern Kansas, L. N. Lingua, I. Massigoge, A. J. P. Carcedo, I. A. Ciampitti
Kansas Agricultural Experiment Station Research Reports
Corn (Zea maysL.) hybrid selection is one of the most important agricultural management decisions made by farmers. Both genetic yield potential and adaptation to the local environment vary widely across corn hybrids, and have a direct impact on yield and input costs. This study compared the performance of corn hybrids with contrasting comparative relative maturity (CRM, referring to their growth cycle), to evaluate their differences in crop phenology, grain yield and its components—grain number and grain weight. The field experiment was conducted during the 2022 growing season in Manhattan, KS (U.S.), testing five commercial corn hybrids with contrasting …
Effects Of Soil Management Practices On Water Infiltration And Maize Yield To Improve Mississippi River Valley Alluvial Aquifer Sustainability, Jacob Rix
Theses and Dissertations
Surface sealing and hardpans in loam soils are problematic in the Mid-South U.S. because of intense tillage. Two experiments quantified the effects of soil management practices on infiltration and maize yield in loam soils. The first study measured the impacts of in-row subsoiling frequency × furrow irrigation frequency. In-row subsoiling significantly improved the infiltration of irrigation but not the infiltration of precipitation. In-row subsoiling with low irrigation frequency is optimal to achieve profitable maize yields while encouraging groundwater conservation. In the second study, six soil management treatments were imposed. For single-ring infiltrometer tests, infiltration rates were different between the two …
A Glass Bead Semi-Hydroponic System For Intact Maize Root Exudate Analysis And Phenotyping, Martha G. Lopez-Guerrero, Peng Wang, Felicia Phares, Daniel P. Schachtman, Sophie Alvarez, Karin V. Van Dijk
A Glass Bead Semi-Hydroponic System For Intact Maize Root Exudate Analysis And Phenotyping, Martha G. Lopez-Guerrero, Peng Wang, Felicia Phares, Daniel P. Schachtman, Sophie Alvarez, Karin V. Van Dijk
Department of Agronomy and Horticulture: Faculty Publications
Background: Although there have been numerous studies describing plant growth systems for root exudate collection, a common limitation is that these systems require disruption of the plant root system to facilitate exudate collection. Here, we present a newly designed semi-hydroponic system that uses glass beads as solid support to simulate soil impedance, which combined with drip irrigation, facilitates growth of healthy maize plants, collection and analysis of root exudates, and phenotyping of the roots with minimal growth disturbance or root damage. Results: This system was used to collect root exudates from seven maize genotypes using water or 1 mM CaCl2, …
Mycorrhizae In Maize (Zea Mays L.) Cropping Systems Respond Differently To Nitrogen Fertilization Under Increasing Crop Rotational Diversity, Morgan Mcpherson
Mycorrhizae In Maize (Zea Mays L.) Cropping Systems Respond Differently To Nitrogen Fertilization Under Increasing Crop Rotational Diversity, Morgan Mcpherson
Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research
Arbuscular mycorrhizal fungi (AMF) remain a vital obligate symbiont of nearly all plants. It is well established that the symbiosis between AMF and host plant improves plant nutrient acquisition, alleviates abiotic and biotic environmental stressors, defends against plant pathogens, and contributes to overall plant fitness and productivity through modification of the soil habitat. Modifications include increased soil aggregation and stability, carbon sequestration through provision of fungal wall precursors to soil organic matter (SOM) formation, and enhanced nutrient cycling in the mycorrhizosphere. The goal of this dissertation was to assess how AMF respond to nitrogen (N) fertilization regimes in maize cropping …
Quantifying The Effects Of Abiotic Stress On Early Season Growth, Development, And Physiological Characteristics In Corn, Charles Hunt Walne
Quantifying The Effects Of Abiotic Stress On Early Season Growth, Development, And Physiological Characteristics In Corn, Charles Hunt Walne
Theses and Dissertations
Corn is one of American agriculture's greatest success stories, where we have witnessed incredible increases in yield potential over the last half-century. However, abiotic stress is still the primary limiting factor preventing plants from reaching their true yield potential. In addition, agriculture is not exempt from the deleterious effects of changing weather patterns and the altered climate our world will face as time progresses. Thus, increasing our understanding of how crops interact with their environment both above and below the soil will be crucial to increasing production on a global scale while maximizing profitability at a local level. Five studies …
How Relevant Is High-Cadence Earth Observation For Maize Crop Phenology Classification?, L. Nieto, R. Houborg, A. Zajdband, A. Jumpasut, P. V. Vara Prasad, B. J. S. C. Olson, I. A. Ciampitti
How Relevant Is High-Cadence Earth Observation For Maize Crop Phenology Classification?, L. Nieto, R. Houborg, A. Zajdband, A. Jumpasut, P. V. Vara Prasad, B. J. S. C. Olson, I. A. Ciampitti
Kansas Agricultural Experiment Station Research Reports
Crop phenology can be defined as the study of biological processes such as emergence, flowering, and senescence that are associated with and affected by environmental growing conditions. The ability to reliably detect crop phenology and its spatial-temporal variability is critical for farmers, policymakers, and government agencies, since it has implications for the entire food chain. Currently, two methods are the most used to report crop phenology. Land surface phenology provides insight into the overall trend, whereas USDA-NASS weekly reports provide insight into the development of specific crops at the regional level. High-cadence earth observations may be able to improve the …
Yield Response To Nitrogen Management In A Corn-Soybean Sequence In North Central Kansas – 2021 Season, A. A. Correndo, O. Lanza Lopez, L. F. A. Almeida, I. A. Ciampitti
Yield Response To Nitrogen Management In A Corn-Soybean Sequence In North Central Kansas – 2021 Season, A. A. Correndo, O. Lanza Lopez, L. F. A. Almeida, I. A. Ciampitti
Kansas Agricultural Experiment Station Research Reports
The aim of this study was to evaluate the response of corn (Zea maysL.) grain yield to nitrogen (N) fertilizer application and its residual effect on soybean [Glycine max(L.) Merr.] seed yield. During the 2021 growing season, a corn-soybean rotation study was continued at Scandia, KS (USA), evaluating the effect of five N fertilizer rates (0, 53, 107, 161, and 214 lb N/a) applied in corn under both dryland and irrigated conditions. Average corn grain yields ranged from 124 to 147 bu/a for dryland, and from 159 to 203 bu/a for irrigated conditions. However, no significant …
Impact Of Urbanization Trends On Production Of Key Staple Crops, José F. Andrade, Kenneth G. Cassman, Juan I. Rattalino Edreira, Fahmuddin Agus, Abdullahi Bala, Nanyan Deng, Patricio Grassini
Impact Of Urbanization Trends On Production Of Key Staple Crops, José F. Andrade, Kenneth G. Cassman, Juan I. Rattalino Edreira, Fahmuddin Agus, Abdullahi Bala, Nanyan Deng, Patricio Grassini
Department of Agronomy and Horticulture: Faculty Publications
Urbanization has appropriated millions of hectares of cropland, and this trend will persist as cities continue to expand. We estimate the impact of this conversion as the amount of land needed elsewhere to give the same yield potential as determined by differences in climate and soil properties. Robust spatial upscaling techniques, well-validated crop simulation models, and soil, climate, and cropping system databases are employed with a focus on populous countries with high rates of land conversion. We find that converted cropland is 30–40% more productive than new cropland, which means that projection of food production potential must account for expected …
Contributions Of Individual Cover Crop Species To Rainfed Maize Production In Semi-Arid Cropping Systems, Alexandre T. Rosa, Cody Creech, Roger W. Elmore, Daran Rudnick, John L. Lindquist, Liberty Butts, Italo K. Pinho De Faria, Rodrigo Werle
Contributions Of Individual Cover Crop Species To Rainfed Maize Production In Semi-Arid Cropping Systems, Alexandre T. Rosa, Cody Creech, Roger W. Elmore, Daran Rudnick, John L. Lindquist, Liberty Butts, Italo K. Pinho De Faria, Rodrigo Werle
Department of Agronomy and Horticulture: Faculty Publications
Cover crop (CC) species selection can contribute to reducing soil penetration resistance (brassica species), improved soil nitrogen (N) cycling (legume species), and suppression of weeds (grass species). However, one of the main concerns about including CCs in water-limited environments is soil water use and the consequences to subsequent crops. To determine the effects of individual CC species under water-limited environments, we evaluated fall and spring CC biomass produced, and soil water and N content, penetration resistance, weed density and biomass during the maize growing season, and maize grain yield. The experiment was conducted under a winter wheat-maize-fallow rotation at two …
Implications Of Cover Crop Planting And Termination Timing On Rainfed Maize Production In Semi-Arid Cropping Systems, Alexandre T. Rosa, Cody Creech, Roger W. Elmore, Daran Rudnick, John L. Lindquist, Miguel Fudolig, Liberty E. Butts, Rodrigo Werle
Implications Of Cover Crop Planting And Termination Timing On Rainfed Maize Production In Semi-Arid Cropping Systems, Alexandre T. Rosa, Cody Creech, Roger W. Elmore, Daran Rudnick, John L. Lindquist, Miguel Fudolig, Liberty E. Butts, Rodrigo Werle
Department of Agronomy and Horticulture: Faculty Publications
Despite the potential to increase soil organic matter, cycle soil nutrients, and suppress weeds, there is a concern that cover crops (CCs) soil water use negatively impacts subsequent crops in water-limited environments. Cover crop management practices such as planting and termination timing may mitigate the detrimental impacts of CCs in semi-arid cropping systems. To determine the effects of CCs under water-limited environments, we evaluated the total CC biomass produced in the fall and spring, soil water content during the subsequent maize growing season, weed density and biomass, crop residue, and soil nutrients at the maize V6 development stage, and maize …
Tandem Duplicate Expression Patterns Are Conserved Between Maize Haplotypes Of The Α-Zein Gene Family, Preston Hurst, James C. Schnable, David R. Holding
Tandem Duplicate Expression Patterns Are Conserved Between Maize Haplotypes Of The Α-Zein Gene Family, Preston Hurst, James C. Schnable, David R. Holding
Department of Agronomy and Horticulture: Faculty Publications
Tandem duplication gives rise to copy number variation and subsequent functional novelty among genes as well as diversity between individuals in a species. Functional novelty can result from either divergence in coding sequence or divergence in patterns of gene transcriptional regulation. Here, we investigate conservation and divergence of both gene sequence and gene regulation between the copies of the α-zein gene family in maize inbreds B73 and W22. We used RNA-seq data generated from developing, self-pollinated kernels at three developmental stages timed to coincide with early and peak zein expression. The reference genome annotations for B73 and W22 were modified …
Effects Of Zeolite On Agronomic And Biochemical Traits And Yield Components Of Zea Mays L. Cv Simone Under Drought Stress Condition, Mehri Salehi, Mahdi Zare, Forood Bazrafshan, Ahmad Aien, Bahram Amiri
Effects Of Zeolite On Agronomic And Biochemical Traits And Yield Components Of Zea Mays L. Cv Simone Under Drought Stress Condition, Mehri Salehi, Mahdi Zare, Forood Bazrafshan, Ahmad Aien, Bahram Amiri
The Philippine Agricultural Scientist
One of the new strategies to increase the effectiveness of chemical fertilizers, prevent the waste of chemical fertilizers, and increase the yield of agricultural products, is the use of natural compound such as zeolite. This study was conducted to investigate the effects of zeolite (0, 5, 10, and 15 t ha-1) on agronomic and biochemical responses as well as yield components of maize (cv. Simon) under normal (90% field capacity), moderate (75% FC), and severe (60% FC) drought stress conditions during 2017-2019. The results showed that moderate and severe drought stress significantly decreased plant height (10.9% and 19.7%, …
Rhizosphere Microbiomes In A Historical Maize-Soybean Rotation System Respond To Host Species And Nitrogen Fertilization At The Genus And Subgenus Levels, Michael A. Meier, Martha G. Lopez-Guerrero, Ming Guo, Marty Schmer, Josh Herr, James Schnable, James R. Alfano, Jinliang Yang
Rhizosphere Microbiomes In A Historical Maize-Soybean Rotation System Respond To Host Species And Nitrogen Fertilization At The Genus And Subgenus Levels, Michael A. Meier, Martha G. Lopez-Guerrero, Ming Guo, Marty Schmer, Josh Herr, James Schnable, James R. Alfano, Jinliang Yang
Department of Agronomy and Horticulture: Faculty Publications
Root-associated microbes are key players in plant health, disease resistance, and nitrogen (N) use efficiency. It remains largely unclear how the interplay of biological and environmental factors affects rhizobiome dynamics in agricultural systems. In this study, we quantified the composition of rhizosphere and bulk soil microbial communities associated with maize (Zea mays L.) and soybean (Glycine max L.) in a long-term crop rotation study under conventional fertilization and low-N regimes. Over two growing seasons, we evaluated the effects of environmental conditions and several treatment factors on the abundance of rhizosphere- and soil-colonizing microbial taxa. Time of sampling, host plant species, …
Resistance To Aflatoxin Accumulation In Maize Mediated By Host-Induced Gene Silencing Of Aspergillus Flavus Alkaline Protease And O-Methyltransferase-A Genes, Olanike Omotola Omolehin
Resistance To Aflatoxin Accumulation In Maize Mediated By Host-Induced Gene Silencing Of Aspergillus Flavus Alkaline Protease And O-Methyltransferase-A Genes, Olanike Omotola Omolehin
LSU Doctoral Dissertations
Aspergillus flavus is a soil-borne fungal pathogen that infects maize and produces aflatoxins. In the current study, portions of the alkaline protease (alk) and the O-methyl transferase (omtA) genes, which are key in A. flavus virulence and aflatoxin biosynthesis, respectively, were targeted for suppression through an RNAi (RNA interference) approach known as Host-Induced Gene Silencing (HIGS). Separate RNAi vectors were designed to carry regions of the alk and omtA gene fragments (Alk-RNAi and OmtA-RNAi) and introduced into B104 maize zygotic embryos. Eight and six transformation events were positive for the alk and omtA transgene, respectively. …
High Plains Wheat Mosaic Virus: An Enigmatic Disease Of Wheat And Corn Causing The High Plains Disease, Satyanarayana Tatineni, Gary Hein
High Plains Wheat Mosaic Virus: An Enigmatic Disease Of Wheat And Corn Causing The High Plains Disease, Satyanarayana Tatineni, Gary Hein
Department of Entomology: Faculty Publications
Brief history: In 1993, severe mosaic and necrosis symptoms were observed on corn (maize) and wheat from several Great Plains states of the USA. Based on the geographical location of infections, the disease was named High Plains disease and the causal agent was tentatively named High Plains virus. Subsequently, researchers renamed this virus as maize red stripe virus and wheat mosaic virus to represent the host and symptom phenotype of the virus. After sequencing the genome of the pathogen, the causal agent of High Plains disease was officially named as High Plains wheat mosaic virus. Hence, High Plains virus, …
Corn Grain Weight: Dependence Upon Nitrogen Supply And Source-Sink Relations, J. A. Fernandez, I. A. Ciampitti
Corn Grain Weight: Dependence Upon Nitrogen Supply And Source-Sink Relations, J. A. Fernandez, I. A. Ciampitti
Kansas Agricultural Experiment Station Research Reports
From a yield component perspective, final grain yield in corn (Zea maysL.) is the result of the number of grains per unit area and their final grain weight. The understanding of grain weight parameters, the rate and duration of grain growth, is critical to improve our rational design of management practices and breeding strategies. In this study, we attempted to determine the effect on grain weight and grain-filling parameters of source-sink modifications (i.e. the amount of assimilates available per grain) during linear grain fill under contrasting levels of nitrogen (N) fertilization in two commercially available US corn hybrids. …
Yield Response To Nitrogen Management In A Corn-Soybean Sequence In North Central Kansas, A. A. Correndo, I. A. Ciampitti
Yield Response To Nitrogen Management In A Corn-Soybean Sequence In North Central Kansas, A. A. Correndo, I. A. Ciampitti
Kansas Agricultural Experiment Station Research Reports
The aim of this study was to evaluate the response of corn (Zea mays L.) grain yield to nitrogen (N) fertilizer application and its residual effect on soybean (Glycine max(L.) Merr.) seed yield. During the 2020 growing season, a corn-soybean rotation study was continued at Scandia, KS (USA), evaluating five N fertilizer rates in corn under both dryland and irrigated conditions. Average corn grain yields ranged from 110 to 206 bu/a for dryland, and from 198 to 221 bu/a for irrigated conditions. Under dryland, maximum corn yields were achieved with an apparent soil N supply level …
Dynamics Of Post-Flowering Nitrogen Uptake And Nitrogen Recovery Efficiency Using 15n Isotope Labeling In Corn, J. A. Fernandez, J. B. Nippert, I. A. Ciampitti
Dynamics Of Post-Flowering Nitrogen Uptake And Nitrogen Recovery Efficiency Using 15n Isotope Labeling In Corn, J. A. Fernandez, J. B. Nippert, I. A. Ciampitti
Kansas Agricultural Experiment Station Research Reports
In corn (Zea maysL.), breeding and selection for grain yield over time has been accompanied by a simultaneous increase in plant nitrogen (N) uptake. The understanding of plant N dynamics has attracted attention due to the environmental concerns related to N losses coming from fertilization. This research study was implemented to 1) describe N uptake and allocation dynamics, and 2) quantify fertilizer recovery efficiency across late-N strategies. Two field experiments (one under irrigation and one rainfed) were conducted at the Ashland Bottoms Research Farm, KS, during 2017. Three hybrids with different year of release and three N scenarios …
Corn Yield Response To Nitrogen In North-Central Kansas, A. A. Correndo, I. A. Ciampitti
Corn Yield Response To Nitrogen In North-Central Kansas, A. A. Correndo, I. A. Ciampitti
Kansas Agricultural Experiment Station Research Reports
The aim of this study was to evaluate the response of corn (Zea maysL.) grain yield to nitrogen (N) fertilizer. During the 2019 cropping season, an N rate experiment in corn was established in Scandia, KS, evaluating five N fertilizer rates as UAN (28-0-0) under both dryland and irrigated conditions. Average yields ranged from 138 to 236 bu/a under rainfed and from 153 to 249 bu/a for irrigated conditions. Under both dryland and irrigated conditions, maximum yields were achieved with an N rate of about 161 lb/a. Total N supply was calculated as N at planting plus fertilizer …
Benchmarking Impact Of Nitrogen Inputs On Grain Yield And Environmental Performance Of Producer Fields In The Western Us Corn Belt, Fatima A.M. Tenorio, Eileen L. Mclellan, Alison J. Eagle, Kenneth G. Cassman, Daryl Andersen, Marie Krausnick, Russell Oaklund, John Thorburn, Patricio Grassini
Benchmarking Impact Of Nitrogen Inputs On Grain Yield And Environmental Performance Of Producer Fields In The Western Us Corn Belt, Fatima A.M. Tenorio, Eileen L. Mclellan, Alison J. Eagle, Kenneth G. Cassman, Daryl Andersen, Marie Krausnick, Russell Oaklund, John Thorburn, Patricio Grassini
Department of Agronomy and Horticulture: Faculty Publications
Benchmarking crop yields against nitrogen (N) input levels can help provide opportunities to improve N ferti-lizer efficiency and reduce N losses on maize in the US Corn Belt by identifying fields most likely to benefit from improved N management practices. Here, we evaluated a large producer database that includes field-level data on yield and applied N inputs from 9280 irrigated and rainfed fields over a 7-year period (2009–2015) in Nebraska (USA). A spatial framework, based on technology extrapolation domains, was used to cluster each field into spatial units with similar climate and soil type that represent 1.3 million ha of …
Genome-Wide Identification And Analysis Of Heterotic Loci In Three Maize Hybrids, Hongjun Liu, Qin Wang, Mengjiao Chen, Yahui Ding, Xuerong Yang, Jie Liu, Xiaohan Li, Congcong Zhou, Qilin Tian, Yiqi Lu, Danlin Fan, Junpeng Shi, Lin Zhang, Congbin Kang, Mingfei Mingfei Sun, Fangyuan Li, Yujian Wu, Yongzhong Zhang, Baoshen Liu, Xiang Yu Zhao, Qi Feng, Jinliang Yang, Bin Han, Jinsheng Lai, Xian Sheng Zhang, Xuehui Huang
Genome-Wide Identification And Analysis Of Heterotic Loci In Three Maize Hybrids, Hongjun Liu, Qin Wang, Mengjiao Chen, Yahui Ding, Xuerong Yang, Jie Liu, Xiaohan Li, Congcong Zhou, Qilin Tian, Yiqi Lu, Danlin Fan, Junpeng Shi, Lin Zhang, Congbin Kang, Mingfei Mingfei Sun, Fangyuan Li, Yujian Wu, Yongzhong Zhang, Baoshen Liu, Xiang Yu Zhao, Qi Feng, Jinliang Yang, Bin Han, Jinsheng Lai, Xian Sheng Zhang, Xuehui Huang
Department of Agronomy and Horticulture: Faculty Publications
Heterosis, or hybrid vigour, is a predominant phenomenon in plant genetics, serving as the basis of crop hybrid breeding, but the causative loci and genes underlying heterosis remain unclear in many crops. Here, we present a large-scale genetic analysis using 5360 offsprings from three elite maize hybrids, which identifies 628 loci underlying 19 yield-related traits with relatively high mapping resolutions. Heterotic pattern investigations of the 628 loci show that numerous loci, mostly with complete–incomplete dominance (the major one) or overdominance effects (the secondary one) for heterozygous genotypes and nearly equal proportion of advantageous alleles from both parental lines, are the …
Benchmarking On-Farm Maize Nitrogen Balance In The Western U.S. Corn Belt, Fatima Amor Tenorio
Benchmarking On-Farm Maize Nitrogen Balance In The Western U.S. Corn Belt, Fatima Amor Tenorio
Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research
A nitrogen (N) balance, calculated as the difference between N inputs and grain-N removal, provides an estimate of the potential N losses. We used N balance with other N-related metrics (partial factor productivity for N inputs, and yield-scaled N balance), to benchmark maize yields in relation with N input use in the US Corn Belt. We first used experimental data on grain-N concentration (GNC) to assess variation in this parameter due to biophysical and management factors. Subsequently, we used N balance and N-related metrics to benchmark yields in relation with N inputs in irrigated and rainfed fields in Nebraska using …
New Approaches To Use Genomics, Field Traits, And High-Throughput Phenotyping For Gene Discovery In Maize (Zea Mays), Zhikai Liang
New Approaches To Use Genomics, Field Traits, And High-Throughput Phenotyping For Gene Discovery In Maize (Zea Mays), Zhikai Liang
Department of Agronomy and Horticulture: Dissertations, Theses, and Student Research
Maize is one of major crop species over the world. With lots of genetic resources and genomic tools, maize also serves as a model species to understand genetic diversity, facilitate the development of trait extraction algorithms and map candidate functional genes. Since the first version of widely used B73 reference genome was released, independent research groups in the maize community propagated seeds themselves for further research purposes. However, unexpected or occasional contamination may happen during this process. The first study in this thesis used public RNA-seq data of B73 from 27 research groups across three countries for calling single nucleotide …
Extreme‐Phenotype Genome‐Wide Association Study (Xp‐Gwas): A Method For Identifying Trait‐Associated Variants By Sequencing Pools Of Individuals Selected From A Diversity Panel, Jinliang Yang, Haiying Jiang, Cheng-Ting Yeh, Jianming Yu, Jeffrey A. Jeddeloh, Dan Nettleton, Patrick S. Schnable
Extreme‐Phenotype Genome‐Wide Association Study (Xp‐Gwas): A Method For Identifying Trait‐Associated Variants By Sequencing Pools Of Individuals Selected From A Diversity Panel, Jinliang Yang, Haiying Jiang, Cheng-Ting Yeh, Jianming Yu, Jeffrey A. Jeddeloh, Dan Nettleton, Patrick S. Schnable
Dan Nettleton
Although approaches for performing genome‐wide association studies (GWAS) are well developed, conventional GWAS requires high‐density genotyping of large numbers of individuals from a diversity panel. Here we report a method for performing GWAS that does not require genotyping of large numbers of individuals. Instead XP‐GWAS (extreme‐phenotype GWAS) relies on genotyping pools of individuals from a diversity panel that have extreme phenotypes. This analysis measures allele frequencies in the extreme pools, enabling discovery of associations between genetic variants and traits of interest. This method was evaluated in maize (Zea mays) using the well‐characterized kernel row number trait, which was …
Extensive Tissue-Specific Transcriptomic Plasticity In Maize Primary Roots Upon Water Deficit, Nina Opitz, Caroline Marcon, Anja Paschold, Waqas Ahmed Malik, Andrew Lithio, Ronny Brandt, Hans-Peter Piepho, Dan Nettleton, Frank Hochholdinger
Extensive Tissue-Specific Transcriptomic Plasticity In Maize Primary Roots Upon Water Deficit, Nina Opitz, Caroline Marcon, Anja Paschold, Waqas Ahmed Malik, Andrew Lithio, Ronny Brandt, Hans-Peter Piepho, Dan Nettleton, Frank Hochholdinger
Dan Nettleton
Water deficit is the most important environmental constraint severely limiting global crop growth and productivity. This study investigated early transcriptome changes in maize (Zea mays L.) primary root tissues in response to moderate water deficit conditions by RNA-Sequencing. Differential gene expression analyses revealed a high degree of plasticity of the water deficit response. The activity status of genes (active/inactive) was determined by a Bayesian hierarchical model. In total, 70% of expressed genes were constitutively active in all tissues. In contrast, <3% (50 genes) of water deficit-responsive genes (1915) were consistently regulated in all tissues, while >75% (1501 genes) were specifically regulated in a single root tissue. Water deficit-responsive genes were most numerous in the …