Marine Biology Commons^™

Circulation Of The Western Antarctic Peninsula: Implications For Biological Production, Maria Andrea Piñones Valenzuela

OES Theses and Dissertations

The western Antarctic Peninsula (wAP) continental shelf is characterized by large persistent populations of Antarctic krill ( Enphausia superba) and by regions of enhanced concentrations of marine mammals and other predators (hot spots). This study focused on understanding the role of ocean circulation in providing retention/connectivity of wAP Antarctic krill populations and in maintaining biological hot spot regions. Numerical Lagrangian particle tracking simulations obtained from the Regional Ocean Modeling System (ROMS) configured for the wAP region provided quantitative estimates of retention, immigration and emigration from the wAP continental shelf. Additional simulations with a one-dimensional temperature-dependent growth model for krill …

The Illusion Of Plenty: Hyperstability Masks Collapses In Two Recreational Fisheries That Target Fish Spawning Aggregations, Brad E. Erisman, Larry G. Allen, Jeremy T. Claisse, Daniel J. Pondella Ii, Eric F. Miller, Jason H. Murray

Daniel Pondella

Fisheries that target fish spawning aggregations can exhibit hyperstability, in which catch per unit effort (CPUE) remains elevated as stock abundance declines, but empirical support is limited. We compiled several fishery-dependent and fishery-independent data sets to assess stock trends in the barred sand bass (Paralabrax nebulifer) and the kelp bass (Paralabrax clathratus) in southern California, USA, evaluate the interaction between spawning aggregations and fishing activities, and test for hyperstability. Annual and seasonal trends from fisheries and population data indicate that regional stocks of both species have collapsed in response to overfishing of spawning aggregations and changes in environmental conditions. The …

Shellfish Tissue Monitoring In Piscataqua Region Estuaries 2010: Final Report, Matthew A. Wood, Philip R. Trowbridge

PREP Reports & Publications

Gulfwatch examines the effects of decades of development and industrialization on the water quality of the Gulf as it relates to human health primarily through assessing contaminant exposure of marine organisms. Gulfwatch scientists collect blue mussels at over 60 US and Canadian sites Gulfwide, and analyze the organisms’ tissue for potentially harmful levels and concentrations of toxins including heavy metals, chlorinated pesticides, polychlorinated biphenyls (PCBs), and polycyclic aromatic hydrocarbons (PAHs). New Hampshire increased the number of Gulfwatch sampling locations from two sites per year in 1997 to an average of five sites per year from 1998-2010. The increased spatial coverage …

Present Limits To Heat-Adaptability In Corals And Population-Level Responses To Climate Extremes, Bernhard Riegl, Samuel J. Purkis, Ashraf S. Al-Cibahy, Mohammed A. Abdel-Moati, Ove Hoegh-Guldberg

Marine & Environmental Sciences Faculty Articles

Climate change scenarios suggest an increase in tropical ocean temperature by 1–3°C by 2099, potentially killing many coral reefs. But Arabian/Persian Gulf corals already exist in this future thermal environment predicted for most tropical reefs and survived severe bleaching in 2010, one of the hottest years on record. Exposure to 33–35°C was on average twice as long as in non-bleaching years. Gulf corals bleached after exposure to temperatures above 34°C for a total of 8 weeks of which 3 weeks were above 35°C. This is more heat than any other corals can survive, providing an insight into the present limits …

Development Of Guidelines For Using Bioextraction Technologies To Manage Nutrients In New Hampshire's Estuarine Waters, Raymond E. Grizzle

PREP Reports & Publications

There is growing literature on bioextraction approaches to managing nutrients in coastal waters, and it includes studies using a variety of species. Bivalve mollusks and macroalgae have received the most attention for several reasons, but perhaps foremost because of their aquaculture potential. A December 2009 workshop at the University of Connecticut, which included speakers from several countries, indicated overall that although bioextraction approaches hold substantial potential there are still many unanswered questions. The present review takes a “what we know/what we need to know” perspective, and focuses on aquaculture. For some taxa (e.g., eastern oyster), wild populations occur in New …

Human Pathogen Shown To Cause Disease In The Threatened Elkhorn Coral Acropora Palmata, Kathryn Patterson Sutherland, Sameera Shaban, Jessica L. Joyner, James W. Porter, Erin K. Lipp

Faculty Publications

Coral reefs are in severe decline. Infections by the human pathogen Serratia marcescens have contributed to precipitous losses in the common Caribbean elkhorn coral, Acropora palmata, culminating in its listing under the United States Endangered Species Act. During a 2003 outbreak of this coral disease, called acroporid serratiosis (APS), a unique strain of the pathogen, Serratia marcescens strain PDR60, was identified from diseased A. palmata, human wastewater, the non-host coral Siderastrea siderea and the corallivorous snail Coralliophila abbreviata. In order to examine humans as a source and other marine invertebrates as vectors and/or reservoirs of the APS pathogen, challenge experiments …

Severe 2010 Cold-Water Event Caused Unprecedented Mortality To Corals Of The Florida Reef Tract And Reversed Previous Survivorship Patterns, Diego Lirman, Stephanie Schopmeyer, Derek Manzello, Lewis J. Gramer, William F. Precht, Frank E. Muller-Karger, Kenneth Banks, Brian Barnes, Erich Bartels, Amanda Bourque, James Byrne, Scott Donahue, Janice Duquesnel, Louis Fisher, David S. Gilliam, James C. Hendee, Meaghan E. Johnson, Kerry Maxwell, Erin Mcdevitt, Jamie Monty, Digna Rueda, Rob Ruzicka, Sara Thanner

Marine & Environmental Sciences Faculty Articles

Background

Coral reefs are facing increasing pressure from natural and anthropogenic stressors that have already caused significant worldwide declines. In January 2010, coral reefs of Florida, United States, were impacted by an extreme cold-water anomaly that exposed corals to temperatures well below their reported thresholds (16°C), causing rapid coral mortality unprecedented in spatial extent and severity.

Methodology/Principal Findings

Reef surveys were conducted from Martin County to the Lower Florida Keys within weeks of the anomaly. The impacts recorded were catastrophic and exceeded those of any previous disturbances in the region. Coral mortality patterns were directly correlated to in-situ and satellite-derived …

Photodissolution Of Sedimentary Organic Matter, Lawrence M. Mayer

University of Maine Office of Research Administration: Grant Reports

The field of marine photochemistry has previously focused on dissolved organic matter and trace metals. However, recent studies have shown that sediment suspensions in the ocean are also affected by sunlight and have the potential to dissolve most of their particulate organic carbon to the dissolved organic phase.

A researcher from the University of Maine will determine the importance of photodissolution in the coastal Louisiana area, where riverine particulates are quickly deposited in shallow waters. Optical properties of the particulates will be examined to assess the photon fluxes and to determine the quantum yields of this photodissolution reaction. To determine …

Application Of A Gene-Based Population Dynamics Model To The Optimal Egg Size Problem: Why Do Bivalve Planktotrophic Eggs Vary In Size?, Eric N. Powell, Jason Morson, John M. Klinck

CCPO Publications

The presumption is that egg quality influences larval survival and that egg size influences egg quality. Thus, larger eggs should be favored by selection. Counterweighing the tendency for egg size to increase is the number of eggs that can be produced if egg size remains small. We examine how egg size and egg number counterbalance in Crassostrea oysters, resulting in an average egg size near 50 mu m. Simulations imposing a diversity of ranges in larval survivorship-from little advantage for large eggs relative to small eggs to a great advantage-yield some anticipated outcomes in which genotypes generating larger eggs are …

Boynton-Delray Coastal Water Quality Monitoring Program, Thomas P. Carsey, Charles M. Featherstone, Kelly D. Goodwin, Christopher D. Sinigalliano, S. Jack Stamates, Jia-Zhong Zhang, John Proni, Joseph R. Bishop, Cheryl J. Brown, Madeleine M. Adler, Patricia Blackwelder, Husain Alsayegh

Marine & Environmental Sciences Faculty Reports

This report discusses a sequence of six cruises in the vicinity of the Boynton-Delray (South Central) treated-wastewater plant outfall plume (26°27'43"N, 80°2'32"W), the Boynton Inlet (26°32'43"N, 80°2'30"W), and the Lake Worth Lagoon, Palm Beach County, Florida. The sampling cruises took place on June 5-6, 2007; August 28-29, 2007; October 18-19, 2007; February 14 and 18, 2008; May 19-20, 2008; and July 11-13, 2008. Water was sampled at 18 locations at the surface, middle, and near the seafloor (where there was sufficient depth) for a total of 45 samples; these samples were analyzed for a variety of nutrients and related parameters. …

The Role Of Crassostrea Virginica Hemocytes In Shell Formation: Ex Vivo Mineral Deposition By Cultured Hemocytes, Emily A. Untener, Douglas C. Hansen, Karolyn Hansen

Biology Faculty Publications

Abstract of Technical Paper Presented at the 103rd Annual Meeting National Shellfisheries Association Baltimore, Maryland March 27–31, 2011

An Analytical Study Of Air-Sea Co2 Gas Exchange In The Northwest Mississippi Bight Region, Andrea Kathryn Braatz

Master's Theses

With the continued increase of carbon dioxide (CO2) emissions, researchers are concerned with accumulation of excess CO2 within the atmosphere. The ocean is an important sink for the drawdown of atmospheric CO2 concentrations. Due to high spatial and temporal variability, CO2 fluxes in the coastal ocean are not as well characterized as those for the open ocean. More specifically, data for the northern Gulf of Mexico (GOM) coastal region is lacking. A time series analysis of air-sea CO2 flux rates from May through December 2009 was conducted using data collected by The University of Southern Mississippi’s Central Gulf Ocean Observing …

Temporal And Spatial Variability Of Phytoplankton Biomass In Coastal Mississippi Waters, Lorin Matthew Dornback

Master's Theses

Chlorophyll concentrations were measured in western Mississippi coastal waters to determine the spatial and temporal variability of phytoplankton. Nutrients (nitrate, silicate, phosphate), river discharge, temperature, salinity, stratification, tides, currents and winds were measured in concert with the phytoplankton concentrations. The purpose of this study was to determine the seasonal variability in phytoplankton and what was driving the variability. This study was comprised of a three year (September 2007-November 2010) time series where samples were taken once a month for eight stations. Profiles of each station were taken using a Conductivity, Temperature and Depth (CTD) sensor and a WET Labs FL-3 …

Feeding Selectivity And Habitat Usage Of Esox Americanus, Scott Richard Clark

Master's Theses

Patterns of piscine prey selection and habitat usage of Esox americanus were assessed through a series of field and experimental studies. Although few detailed studies exist on the foraging behavior and habitat usage of E. americanus, throughout its range it may be an important trophic component in maintaining fish assemblage structure in many lower order streams. Across 17 sampled streams, the presence of E. americanus among reaches within streams was found to be strongly correlated with increasing levels of habitat complexity. Reaches occupied by E. americanus featured increased amounts of in-stream physical structure, increased variability in stream width and …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

Dissolved And Colloidal Element Transport Through The Coastal Transition Zone, Moo Joon Shim

Dissertations

There are several factors (e.g., hurricanes, floodplain, and anthropogenic sources) that could modify trace element behavior through the coastal transition zone (CTZ). However, there is still a lack of information about these variables in affecting trace elements in the CTZ. For this study, water samples were collected in the Pearl River (PR), Bay of St. Louis (BSL), and the Mississippi River plume to study the effects of these factors on trace element.

A possible effect of Hurricane Katrina on water quality was examined in the East Pearl River (EPR). Hurricane Katrina could have resulted in increased inputs of organic matter …

Mycorrhizal Colonization Of Native Salt Marsh Plants On Mississippi's Gulf Coast And The Effects Of Commercial Mycorrhizal Inoculants On Nursery-Grown Plants, Kathryn Rondot Mcbride

Master's Theses

Salt marshes are important economically and ecologically to the Gulf Coast and other coasts worldwide. Due to human activities, many coastal salt marshes have been degraded or destroyed. Restoration efforts, through the replacement or addition of naturally occurring salt marsh plants, are taking place worldwide. Most restoration plants are raised in nurseries and are not ready for transfer to restoration sites for eight or nine months. Once the plants are at the restoration site many die due to transplant stress. Arbuscular Mycorrhizal Fungi (AMF) may be able to shorten the time the restoration plants need to stay in the nursery …

Toward An Understanding Of The Molecular Mechanisms Of Barnacle Larval Settlement: A Comparative Transcriptomic Approach, Zhang-Fan Chen, Kiyotaka Matsumura, Hao Wang, Shawn M. Arellano, Xingcheng Yan, Intikhab Alam, John A.C. Archer, Vladimir B. Bajic, Pei-Yuan Qian

Shannon Point Marine Center Faculty Publications

Background: The barnacle Balanus amphitrite is a globally distributed biofouler and a model species in intertidal ecology and larval settlement studies. However, a lack of genomic information has hindered the comprehensive elucidation of the molecular mechanisms coordinating its larval settlement. The pyrosequencing-based transcriptomic approach is thought to be useful to identify key molecular changes during larval settlement.

Methodology and Principal Findings: Using 454 pyrosequencing, we collected totally 630,845 reads including 215,308 from the larval stages and 415,537 from the adults; 23,451 contigs were generated while 77,785 remained as singletons. We annotated 31,720 of the 92,322 predicted open reading frames, which …

The Lobster Bulletin, Summer 2011, Lobster Institute, University Of Maine

Lobster Bulletin

The Lobster Bulletin newsletter includes research updates, and information on lobsters and the lobster industry. The Lobster Institute at the University of Maine is dedicated to protecting and conserving the lobster resource, and enhancing lobstering as an industry and a way of life.

Headlines in the Summer 2011 issue include:

• Lobster Institute Cooperating Experts Directory a Valuable Asset
• Atlantic Lobster Sustainability Foundation Hosts First Lobster Science Symposium
• Research Report: Using the Invasive Green Crab in Food Product Development
• Research Report: Progress in the war against sea lice
• Maine Lobster Chef of the Year Finalists to Compete in Portland

A Molecular Assessment Of Speciation And Evolutionary History Of The Globally Distributed Spotted Eagle Ray (Aetobatus Narinari), Vincent P. Richards, Marcy Henning, Wayne Witzell, Mahmood S. Shivji

Marine & Environmental Sciences Faculty Proceedings, Presentations, Speeches, Lectures

The spotted eagle ray (Aetobatus narinari), a species of conservation concern (Near Threatened IUCN category) is commonly associated with coral reef ecosystems worldwide where it is likely to play an important predatory role. Currently described as a single, circumglobally distributed species, geographic differences in parasite diversity have led to suggestions that A. narinari may constitute a species complex. There has been no systematic evidence to support this suggestion, however. If multiple species of spotted eagle ray exist, each will likely posses decreased geographic ranges and population sizes, altering the impacts of threats and requiring separate assessments of conservation …

Invertebrate Zooid Polymorphism: Hydractinia Polyclina And Pagurus Longicarpus Interactions Mediated Through Spiralzooids, Charlotte M. Regula-Whitefield

All Theses And Dissertations

Evaluating the net interaction between symbionts can be challenging when one participant is a colonial animal with polymorphic zooids, because each zooid type has unique functions. The colonial hydroid Hydractinia polyclina has three distinct zooid types, each of which contributes particular components to the interaction with host hermit crabs. Of these three zooid types, the function of spiralzooids is not well understood. Previously, spiralzooids have been proposed to contribute a strong negative interaction component by directly reducing their host hermit crab’s reproductive output. However, this hypothesis is not supported by past or current data. I propose that spiralzooids instead function …

Bridging The Marine–Terrestrial Disconnect To Improve Marine Coastal Zone Science And Management, Benjamin I. Ruttenberg, Elise F. Granek

Environmental Science and Management Faculty Publications and Presentations

Coastal zone ecosystems sit between larger terrestrial and marine environments and, therefore, are strongly affected by processes occurring in both systems. Marine coastal zone systems provide a range of benefits to humans, and yet many have been significantly degraded as a result of direct and indirect human impacts. Management efforts have been hampered by disconnects both between management and scientific research and across linked marine–terrestrial systems. Management jurisdictions often start or end at the shoreline, and multiple agencies at different levels of government often have overlapping or conflicting management goals or priorities, or suffer from a lack of knowledge or …

Rna Interference In Marine And Freshwater Sponges: Actin Knockdown In Tethya Wilhelma And Ephydatia Muelleri By Ingested Dsrna Expressing Bacteria, Ajna S. Rivera, April L. Hill, Et. Al.

Biology Faculty Publications

Background: The marine sponge Tethya wilhelma and the freshwater sponge Ephydatia muelleri are emerging model organisms to study evolution, gene regulation, development, and physiology in non-bilaterian animal systems. Thus far, functional methods (i.e., loss or gain of function) for these organisms have not been available.

Results: We show that soaking developing freshwater sponges in double-stranded RNA and/or feeding marine and freshwater sponges bacteria expressing double-stranded RNA can lead to RNA interference and reduction of targeted transcript levels. These methods, first utilized in C. elegans, have been adapted for the development and feeding style of easily cultured marine and freshwater poriferans. …

Results Of A Preliminary Shoreline Shellfish Sanitary Survey Near Banjul, Gambia Conducted On 18 June 2011, Kanyi Babanding, Michael A. Rice

Michael A Rice

A preliminary shoreline survey was conducted along the Bund Road (frequently referred to as Bond Road) levee and the Banjul-Serrekunda Highway in the northern Tanbi Wetlands oyster harvesting area in the metropolitan Banjul area. In part this was designed as a training exercise for Gambian officials will be assuming responsibility for future shoreline surveys in the Gambia. Key identified areas of concern include the Banjul fish landing area on Bund Road utilized by a number of artisanal fishers; an over-water toilet facility for fishers near the fish landing site; evidence of illegal waste and rubbish dumping along Bund Road; an …

Extensive Reproductive Disruption, Ovarian Masculinization And Aromatase Suppression In Atlantic Croaker In The Northern Gulf Of Mexico Hypoxic Zone, Peter Thomas, Md. Saydur Rahman

School of Earth, Environmental, and Marine Sciences Faculty Publications and Presentations

The long-term impacts on marine ecosystems of the recent dramatic worldwide increase in the incidence of coastal hypoxia are unknown. Here, we show widespread reproductive disruption in Atlantic croakers collected from hypoxic sites approximately 120 km apart in the extensive northern Gulf of Mexico continental shelf hypoxic zone. Gonadal growth and gamete production were impaired in croakers from hypoxic sites compared with fish from reference normoxic sites east of the Mississippi River Delta. Male germ cells were detected in approximately 19 per cent of croaker ovaries collected in the hypoxic region, but were absent in ovaries from normoxic sites. In …

Variability In Protist Grazing And Growth On Different Marine Synechococcus Isolates, Jude K. Apple, Suzanne L. Strom, Brian Palenik, Bianca Brahamsha

Shannon Point Marine Center Faculty Publications

Grazing mortality of the marine phytoplankton Synechococcus is dominated by planktonic protists, yet rates of consumption and factors regulating grazer-Synechococcus interactions are poorly understood. One aspect of predator-prey interactions for which little is known are the mechanisms by which Synechococcus avoids or resists predation and, in turn, how this relates to the ability of Synechococcus to support growth of protist grazer populations. Grazing experiments conducted with the raptorial dinoflagellate Oxyrrhis marina and phylogenetically diverse Synechococcus isolates (strains WH8102, CC9605, CC9311, and CC9902) revealed marked differences in grazing rates-specifically that WH8102 was grazed at significantly lower rates than all …

Study Of The Far Wake Of A Large Ship, M. Gilman, Alexander Soloviev, H. Graber

Marine & Environmental Sciences Faculty Articles

A large dataset of high-resolution photographic images of far wakes of a volunteer observing ship (Royal Caribbean’s Explorer of the Seas) has been acquired under various meteorological conditions and ship operation modes. This work presents the description of instrumentation, methodology, and the results of the experiment. Environmental and ship operation factors that affect appearance and geometric properties of ship wakes in photographic and satellite-based radar images have been analyzed. The photo imagery reveals an asymmetry of the wake depending on wind direction relative to the ship course. In addition, a good agreement between the averaged shape of the wakes …

Virginia Game Fish Tagging Program Annual Report 2010, Susanna Musick, Lewis Gillingham

Reports

Through 2010, the Virginia Game Fish Tagging Program has maintained a 16-year database of records for tagged and recaptured fish. The program is a cooperative project of the Virginia Saltwater Fishing Tournament (under the Virginia Marine Resources Commission-VMRC) and the Virginia Institute of Marine Science (VIMS) of the College of William and Mary (under the VIMS Marine Advisory Program).

Nudibranch Predators Of Octocorallia, Eric Brown

HCNSO Student Capstones

Nudibranchs are soft-bodied marine heterobranch gastropod molluscs which lack a shell and mantle cavity. The basic body plan is bilaterally symmetrical with an expanded notum, but in regards to other physical characteristics they exhibit a wide range of forms. Compared to other molluscs, evolutionarily the head and body became flattened and streamlined and tentacles have been lost or shifted to different areas of the body. Nudibranchs are found in many variations of size and color; despite the fact that these animals in general are noted for flamboyant colors and prominent external anatomical structures, many species rely upon a more cryptic …

Nitrogen, Phosphorus, And Suspended Solids Concentrations In Tributaries To The Great Bay Estuary Watershed In 2010, New Hampshire Department Of Environmental Services, Matthew A. Wood, Philip Trowbridge

PREP Reports & Publications

Nitrogen, phosphorus, and sediment loads to the Great Bay Estuary are a growing concern. The Piscataqua Region Estuaries Partnership (PREP) calculates the nitrogen load from tributaries to the Great Bay Estuary for its State of the Estuaries reports. Therefore, the purpose of this study was to collect representative data on nitrogen, phosphorus, and suspended sediment concentrations in tributaries to the Great Bay Estuary in 2010. The study design followed the tributary sampling design which was implemented by the New Hampshire Department of Environmental Services between 2001 and 2007 and by the University of New Hampshire in 2008 and 2009, so …