Marine Biology Commons^™

Evidence For Extra-Gastric Expression Of The Proton Pump H+/K+ -Atpase In The Gills And Kidney Of The Teleost Oreochromis Niloticus, Ebtesam Barnawi

Theses and Dissertations (Comprehensive)

It is well known that stomach acid secretion by oxynticopeptic cells of the gastric mucosa is accomplished by the H⁺/ K⁺-ATPase (HKA), which is comprised of the HKα1 (gene: atp4a) and HKβ (gene: atp4b) subunits. However, the role of the HKA in extra-gastric organs such as the gill and kidney is less clear especially in fishes. This pump may contribute to active ion and/or acid-base regulation either through direct ion transport or through secondary transport proteins against unfavorable concentration gradients via the energy derived from ATP hydrolysis. In the present work I have demonstrated …

Ms Environmental Biology Capstone Project, Alyssa Herrin

Regis University Student Publications (comprehensive collection)

The study of visitor use in museums, zoos, and aquariums is an important aspect of understanding visitor engagement and evaluating the function of the institution. Here, visitor demographics such as age, group size, and number of children were assessed to see their influence on time spent and number of stops visitors made while visiting the Denver Botanic Gardens in Denver, Colorado. This study evaluated differences in time spent and number of stops made among different gardens by observing visitors and mapping their paths and activities through each zone. The results show that older visitors and larger groups spent more time …

Ecological Implications Of Foraging And Life-History In Three Cold-Adapted Species, Andrew Von Duyke

Dissertations, Master's Theses and Master's Reports

This research investigates the ecology of: ringed seals (Pusa hispida), moose (Alces alces), and bowhead whales (Balaena mysticetus). Each of these species draws upon specialized strategies to meet the physical demands of life in their extreme environments. However, they are currently experiencing unprecedented changes in their habitats. This work adds to what is known about the behavior, physiology, and population dynamics of cold-adapted species—providing insights of value for an improved understanding of foraging and life-history theory, and informing conservation and ecosystem monitoring efforts. Chapter 1 provides a brief introduction to the scope of work …

Escorting Of Mother-Calf Pairs Of Humpback Whales (Megaptera Novaeangliae) In The Colombian Pacific During The Breeding Season, Natalia Botero Acosta

Dissertations

Humpback whales (Megaptera novaeangliae) belonging to the “breeding G-stock” annually migrate from the Antarctic Peninsula and southern Chile to the southeastern Pacific to reproduce. Associations between mother-calf pairs and escorts were examined in the Gulf of Tribugá, northern Colombian Pacific, using photo-identification and behavioral/spatial sampling. Research hypotheses included: 1. The association between cows and escorts is short-lived, consistent with a male reproductive strategy, 2. The presence of escort(s) elicits a behavioral response from mother-calf pairs and, 3. The patterns of spatial distribution reflect the spatial segregation of maternal females. Groups were classified as mother-calf pairs (Mc), mother, calf …

Evaluating Social Network Dynamics Of Bigg’S Killer Whales (Orcinus Orca) And Vessel Traffic Within A Transboundary Region: Implications For Conservation Management, Courtney Smith

Dissertations

The social lives of animals are defined by group dynamics based on the nature and strength of associations and movements between individuals, often resulting in highly complex and interconnected social networks. However, understanding of how environmental variables may shape this structure is poorly understood. Within the inland waters of Washington State and southern Vancouver Island, British Columbia, mammal-eating Bigg’s (transient) killer whales occur in relatively small, but stable social groups. Group size and occurrence in recent years has increased, coinciding with a growing whale watching industry. Given the central importance of the social network within killer whale population dynamics, such …

Evaluating The Ecological Status Of The Introduced Nile Monitor (Varanus Niloticus) In Florida: Forecasting Presence And Population Expansion Using Computational Geographic Information Systems, Noah G. Cohen

HCNSO Student Theses and Dissertations

The Nile monitor (Varanus niloticus) is a large, carnivorous lizard that has become a notorious invasive species in Florida, USA. Initially released in the 1980s from the pet trade, the species has since established at least three breeding populations and spread throughout much of southern Florida. While current control efforts have failed to eradicate V. niloticus, it is important to attain a better understanding of its invasive dynamics to guide and inform better control strategies. In this study, available georeferenced records of V. niloticus in Florida were compiled and linked to a habitat classification map to evaluate ecotype preferences. Factored …

Measuring Fertilization In Populations Of Sea Scallop (Placopecten Magellanicus): Developing And Testing Methods In The Laboratory And Field, Skylar Bayer

Electronic Theses and Dissertations

Most marine organisms are broadcast spawners, releasing their sperm and eggs into the water column. Methods of measuring in situ fertilization have proven successful with a few model species, which are reviewed in my introductory chapter. However, many commercially exploited species, such as the sea scallop Placopecten magellanicus, have been neglected. Sea scallop populations have greatly increased from fishing closures, but the mechanism behind this response is uncertain, particularly in regard to fertilization. In this dissertation I developed a methodology of measuring fertilization success and spawning events of P. magellanicus, tested it in laboratory and field settings, and …

Time-Activity And Energy Budgets Of Eared Grebes (Podiceps Nigricollis) At Salton Sea, Samantha San Francisco

Theses

Time-activity budgets have been a widely accepted way of approximating the daily energy expenditure of many species, including waterbirds. For this study, focal animal sampling was used to study Eared Grebes (Podiceps nigricollis) at their post-wintering stopover site, Salton Sea. Daylight time-activity budgets were converted to energy budgets using energy equivalents for diving, preening, swimming, and resting on water developed for Eared Grebes previously by H. I. Ellis (1994). Post-wintering Eared Grebes arrive at Salton Sea in waves at differing times in the spring. As a result, there can be individuals in a variety of physiological states during …

The Effect Of Boat Type On Bottlenose Dolphin (Tursiops Trucatus) Behavior In The Mississippi Sound, Maria Zapetis

Master's Theses

Increases in oceanic shipping are a global phenomenon, and a leading cause of concern for marine animal welfare. While it may be difficult to assess the effect of boat traffic on all species in all contexts, it is vital to report anthropogenic impacts where longitudinal data is available, and doubly so where a dearth of information exists. The purpose of this study is to describe how dolphin behavior changed in the presence of boats in the Mississippi Sound between 2006 and 2012, and more specifically, to detail how different boat types impacted dolphins’ behavioral states. This study is unique in …

Plasma Metabolites Reveal Changes In Physiological State Of Eared Grebes (Podiceps Nigricollis) During Three Non-Migratory Periods, Allison A. Yoshida

Theses

Energy storage and use during the annual cycle of migratory birds is dynamic especially during migration. However, considerable amounts of the annual cycle are spent not migrating, and the physiological state of birds during these non-migratory periods is not well understood. We compared plasma metabolites (TRIG, BUTY, URIC, GLY) in Eared Grebes (Podiceps nigricollis) residing at three important areas when they are not migrating: fall staging (postbreeding at Mono Lake, California), spring staging (pre-breeding at Great Salt Lake, Utah), and an extended stopover prior to spring staging (Salton Sea, California). Plasma metabolites were also measured in resting and active grebes …

Age, Growth And Reproduction Of Western North Atlantic Butterfly Rays (Myliobatiformes: Gymnuridae), With The Description Of Two New Species, Kristene Teal Parsons

Dissertations, Theses, and Masters Projects

Batoid fishes are among the most threatened and least understood chondrichthyan species worldwide due to their large body size, conservative life-history characteristics, and predominantly coastal distributions where fishing and habitat degradation threaten the stability of populations. A lack of empirical life history data is widespread across batoid taxa — nearly half of all species are considered data deficient, thus hindering species assessments and the development of effective management strategies. Furthermore, many batoid taxa are in need of taxonomic re-examination. Increasing our understanding of life history traits that determine population productivity, such as age and size at maturity, growth rate, and …

Reproductive Altruism, Social Diversity And Host Association In Sponge-Dwelling Snapping Shrimps, Synalpheus, Tin Chi Solomon Chak

Dissertations, Theses, and Masters Projects

The diversity of animal social strategies has interested evolutionary biologists since the time of Darwin. Eusociality—the apex of animal sociality—traditionally characterized by cooperative offspring care, overlapping generations and reproductive division of labor, was until recently known only in insects and a few vertebrate species. The independent evolution of eusociality in shrimps in the genus Synalpheus offers a unique opportunity to test the generality of social evolution theories that are based mainly on insects and social vertebrates. The genus Synalpheus is particularly ideal for comparative analysis because their social organizations are highly diverse, yet they share very similar ecology of being …

A Missing Link In The Ionoregulatory Strategy Of Larval Sea Lamprey (Petromyzon Marinus) And African Lungfish (Protopterus Annectens): A Closer Look Into The Role Of The Non-Gastric H+/K+-Atpase, Justine E. Doherty

Theses and Dissertations (Comprehensive)

Fishes living in freshwater need to actively compensate for the diffusive loss of ions and osmotic gain of water. The gill is the primary organ of ion regulation and contains an array of ion transport proteins to help maintain homeostasis. Two of the more well studied ion pumps are the Na⁺/K⁺-ATPase (NKA) and vacuolar type proton ATPase (V-ATPase). This thesis focuses on another ion pump known as the non-gastric H⁺/K⁺-ATPase (ngHKA). The ngHKA (gene: atp12a) has not been found in any of the teleost fishes, indicating loss from that lineage. In …

Rare Occurrences Of Free-Living Bacteria Belonging To Sedimenticola From Subtidal Seagrass Beds Associated With The Lucinid Clam, Stewartia Floridana, Aaron M. Goemann

Masters Theses

Lucinid clams and their sulfur-oxidizing endosymbionts comprise two compartments of a three-stage, biogeochemical relationship among the clams, seagrasses, and microbial communities in marine sediments. A population of the lucinid clam, Stewartia floridana, was sampled from a subtidal seagrass bed at Bokeelia Island Seaport in Florida to test the hypotheses: (1) S. floridana, like other lucinids, are more abundant in seagrass beds than bare sediments; (2) S. floridana gill microbiomes are dominated by one bacterial operational taxonomic unit (OTU) at a sequence similarity threshold level of 97% (a common cutoff for species level taxonomy) from 16S rRNA genes; …

Effects Of Pre-Release Physical Stressors On Post-Release Success Of Hatchery-Reared Spotted Seatrout, Taylor Westbrook Guest

Master's Theses

Alteration of habitat associated with coastal development and increased demand for food and recreation can result in the depletion of fisheries resources such as the Spotted Seatrout (Cynoscion nebulosus), the Gulf of Mexico’s most popular recreational fish. Stock enhancement, or the release of cultured fish to supplement wild populations, is one potential tool for managing important fisheries resources. Although much effort has gone into marine stock enhancement, the effectiveness of stocking is not well established, and techniques for ensuring success have not been developed. Although the basic biology of the Spotted Seatrout is well known, comparatively little is known about …

Spatial And Oceanographic Factors Affecting Black-Legged Kittiwake And Thick-Billed Murre Distributions In The Southeastern Bering Sea, Brian Hoover

Capstone Projects and Master's Theses

The distribution patterns of Thick-billed Murres (Uria lomvia) and Black-legged Kittiwakes (Rissa tridactyla) in the southeastern Bering Sea were documented at sea during vessel-based surveys in July-August of 2008 and 2009. The relationships of murre and kittiwake densities with environmental variables were investigated using binomial generalized additive models (GAMs) to model the presence or absence of birds, and Gamma-error distribution GAMs to model the positive densities of birds. Environmental variables included oceanographic factors (Chlorophyll, Chlorophyll anomalies, Daily SST, Monthly SST), spatial factors (Distance to nearest colony, Distance to 300m shelf break, Depth), and a temporal factor (Year). Nocturnal surveys were …

Migration Dynamics, Within-Estuary Behaviors And Cardiorespiratory Responses Of Summer Flounder To Selected Estuarine Conditions, Karen M. Capossela

Dissertations, Theses, and Masters Projects

A comprehensive understanding of migration dynamics, within-estuary behaviors and physiological tolerances of fish is needed to assess and predict future responses of fish to environmental disturbance and to protect habitat necessary for growth and survival. This study adds to current knowledge of summer flounder (Paralichthys dentatus) responses to environmental conditions by (1) examining migration and within-estuarine behaviors of adult summer flounder and (2) establishing summer flounder metabolic requirements and cardiorespiratory responses to variations in hypoxia and temperature. To elucidate use of a southern mid-Atlantic Bight estuary by adult summer flounder, the movements of 45 fish were monitored using acoustic telemetry …

Sources Of Mortality, Movements And Behavior Of Sea Turtles In Virginia, Katherine Lamont. Mansfield

Dissertations, Theses, and Masters Projects

Aerial surveys are commonly used to evaluate in-water sea turtle abundances. A correction is applied to account for turtles diving below the observed surface. Historically, observations of summer/fall surfacing behavior were used for this correction, assuming constant behavior among seasons. Using radio/acoustic telemetry, seasonal differences in sea turtle surfacing behavior were determined among Kemp's ridleys and loggerheads. Mean time spent at surface in the spring ranged between 9.9%-30.0% with significant differences among individuals. Observed surfacing times were higher than historic summer/fall observations (Byles 1988; 5.3%), indicating that historic springtime abundances were overestimated by 50%-80%. Aerial surveys (2001-2004) indicated a 65%-75% …

Ecology And Conservation Of Virginia Shark Species: Analysis Of Thirty Years Of Virginia Long-Line Shark Census Data, 1974--2004, Daniel Stuart Ha

Dissertations, Theses, and Masters Projects

Sharks of the Atlantic coast of the United States have suffered increased fishing pressure in last three decades. Commercial and recreational catches jumped in the mid to late 1980's, leading to regulation by the National Marine Fisheries Service in the early 1990's. The Virginia Institute of Marine Sciences' shark long-line survey, begun in 1974, and continuing to the present day, is thus well positioned to look at the effects of this fishing mortality on sharks. Using GAM modelling, six of ten shark species analyzed, including the most common species, Carcharhinus plumbeus, suffered declines of from 98-99% of early abundances in …

Nursery Delineation, Movement Patterns, And Migration Of The Sandbar Shark, Carcharhinus Plumbeus, In The Eastern Shore Of Virginia Coastal Bays And Lagoons, Christina L. Conrath

Dissertations, Theses, and Masters Projects

The identification and delineation of nursery areas and areas of aggregation of north Atlantic sharks has been identified as an important information need for future management efforts. The objectives of this project were to use a fishery-independent method to study the overwintering area of juvenile sandbar sharks, to spatially delineate the Eastern Shore nursery area, and to examine movement patterns and space use within this nursery area. Data from 21 satellite transmitters attached to large juvenile sandbar sharks revealed that these sharks primarily occurred off the outer banks of North Carolina, at deeper depths and colder water temperatures during the …

Characterization Of Association Patterns Of Coastal Migratory Bottlenose Dolphins, Tursiops Truncatus, In The Nearshore Waters Of Virginia Beach, Virginia, Holly Fearnbach

Biological Sciences Theses & Dissertations

Bottlenose dolphins, Tursiops truncatus, commonly occur in fission-fusion social systems. For this study, I analyzed photo-identification data from 1994 to 1999 to describe association patterns of bottlenose dolphins in the nearshore waters of Virginia Beach, Virginia. Bottlenose dolphins are present seasonally (late April until early November) in these waters and individuals are considered to be members of the North Atlantic coastal migratory stock. I selected 78 individuals for detailed analyses from the 972 dolphins identified in the study area. Those chosen as “select” dolphins had been sighted at least five times in three of the six study years; all …

A Descriptive Study Of The Reproductive Biology Of The Veined Rapa Whelk (Rapana Venosa) In The Chesapeake Bay, Erica S. Westcott

Dissertations, Theses, and Masters Projects

No abstract provided.

Comparative Systematics Of Subterranean Amphipod Crustaceans In The Families Crangonyctidae And Bogidiellidae, Stefan Koenemann

Biological Sciences Theses & Dissertations

The research project presented in this doctoral dissertation deals with the systematics of two different taxonomic groups of subterranean amphipods (Crustacea). Therefore, rather than being a single project, this study is divided into several sub-projects. Altogether, the chapters for the sub-projects are composed of five publications. An introductory chapter and a summarizing discussion are added to provide a structural unit for the collection of papers and to compare the results of the individual projects.

The thesis investigates the systematics of the amphipod families Bogidiellidae Hertzog, 1936, and Crangonyctidae Bousfield, 1973. Based on descriptive taxonomy according to modern standards, revisions are …

Population Dynamics Of The Smooth Dogfish, Mustelus Canis, In The Northwest Atlantic, Christina L. Conrath

Dissertations, Theses, and Masters Projects

No abstract provided.

Demographics, Production, And Benthic -Pelagic Coupling By The Suspension Feeding Polychaete Chaetopterus Pergamentaceus In The Lower Chesapeake Bay, Michelle Lynne Thompson Neubauer

Dissertations, Theses, and Masters Projects

For many shallow water environments, ecosystem function depends on the cycling and flow of materials and energy between benthic and pelagic subsystems. Benthic suspension feeders often are important links between the water column and sediment in coastal ecosystems. Populations of the suspension feeding polychaete Chaetopterus pergamentaceus (previously reported as Chaetopterus variopedatus) are widely distributed along the United States East Coast, ranging from New England to Florida. This species is a structurally and functionally important member of the lower Chesapeake Bay benthic community, where it has maintained stable populations for at least the last 15 years. Little is known regarding the …

Sensory Development In Settlement-Stage Larvae Of Caribbean Labrids And Scarids: A Comparative Study With Implications For Ecomorphology And Life History Strategies, Monica R. Lara

Dissertations, Theses, and Masters Projects

The sensory capabilities of settlement-stage fishes are unknown but this information is necessary to studies of larval settlement and recruitment. The morphology of the cephalic lateral line, eye and external olfactory organ of thirteen species of settlement-stage Caribbean labroids was described. Scanning electron images of the cephalic lateral line neuromasts, lateral line canals and olfactory epithelia and histological studies of the retinae and morphological measurements of visual acuity were used to assess the level of sensory development attained at settlement. The sensory capabilities of settlement-stage fishes are discussed in relation to the possible cues settlement-stage fishes may be using to …

Distribution, Swimming Physiology, And Swimming Mechanics Of Brief Squid Lolliguncula Brevis, Ian K. Bartol

Dissertations, Theses, and Masters Projects

Squids are thought to have physiological and locomotive deficiencies that put them at a competitive disadvantage to fishes and exclude them from inshore, highly variable environments that are rich in nektonic fauna. However, brief squid Lolliguncula brevis may be a notable exception. Trawl surveys revealed that L. brevis, particularly juveniles <6 cm dorsal mantle length (DML), are abundant in the Chesapeake Bay, especially when salinity and water temperature are high, and tolerate a wide range of physical conditions relative to other cephalopods. L. brevis is also different from other cephalopods examined previously because its pattern of oxygen consumption as a function of velocity was found to be parabolic and thus similar to aerial flight, and its swimming costs were competitive with ecologically equivalent fishes. Power-speed curves derived from video footage of swimming squid and hydrodynamic force calculations also were parabolic in shape, with high costs both at low and high speeds because of power requirements for lift generation and overcoming drag, respectively. L. brevis employed various behaviors to increase swimming efficiency and compensate for negative buoyancy, such as swimming in various orientations (e.g., arms-first and tail-first), altering angles of attack of the mantle, arms, and funnel, and using fin activity. Fin motion, which could not be characterized exclusively as drag- or lift-based propulsion, was used over 50--95% of the sustained speed range and provided as much as 78% of the vertical and 55% of the horizontal thrust. Small squid (<3.0 cm DML) used different swimming strategies than larger squid possibly to maximize the benefits of toroidal induction, and aerobic efficiency curves indicated that squid 3--5 cm. DML are most efficient. Brief squid also may take advantage of unsteady phenomena, such as attached vortices, for added lift and thrust. Furthermore, an electromyographic study revealed that L. brevis uses different circular muscle layers for various speeds and like fish has muscular "gears", suggesting that there is specialization and efficient use of locomotive muscle in some cephalopods. Therefore, the presumption that squids are inescapably constrained by a second-rate propulsive system and physiological deficiencies is not applicable to L. brevis.

Aspects Of The Biology Of Sea Turtles In The Mid-Atlantic Bight, William C. Coles

Dissertations, Theses, and Masters Projects

I present here an investigation of several aspects of the biology of sea turtles in the mid-Atlantic Bight. During 19 years of data collection, included in this study, strandings have increased for all species of sea turtles in Virginia. Most sea turtle strandings occurred during the spring when juvenile turtles migrate into the Bay (Kemp's ridleys had a second significant stranding peak, during fall migration) along the Southern Bay and Virginia Beach Oceanfront. Sea turtles utilize the Chesapeake Bay as a feeding area when the water temperature approaches 20??C, and they leave after the water temperature drops below 20??C. Although …

Indo-Pacific Population Structure Of The Black Marlin, Makaira Indica, Inferred From Molecular Markers, Brett Falterman

Dissertations, Theses, and Masters Projects

No abstract provided.

Diet Composition And Feeding Habits Of Large Striped Bass, Morone Saxatilis, In Chesapeake Bay, John F. Walter

Dissertations, Theses, and Masters Projects

No abstract provided.