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Biodiversity

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Full-Text Articles in Other Ecology and Evolutionary Biology

Csi Botany: Dna Barcode “Fingerprints” Identify Cryptic Urban Flora, Luis R. Vega Jan 2023

Csi Botany: Dna Barcode “Fingerprints” Identify Cryptic Urban Flora, Luis R. Vega

Theses

As short genomic markers, DNA barcodes can play a role in conservation by identifying cryptic species and hybrids when morphological approaches fall short. Here we present our application of barcodes to the identities of two wetland taxa as part of an ongoing floristic inventory of Van Cortlandt Park (VCP), Bronx, NY. Previous barcode data by Marriott et al. (2018) identified the VCP lake water lily as the exotic Nymphaea alba, rather than the native N. odorata as historically described. In addition, cattails in the park were historically identified as the native Typha latifolia and the exotic T. angustifolia …


Effects Of Forest Restoration On The Recovery Of Dead Wood, Associated Arthropods, And Insect-Mediated Wood Decomposition, Estefania Fernandez Barrancos Jun 2022

Effects Of Forest Restoration On The Recovery Of Dead Wood, Associated Arthropods, And Insect-Mediated Wood Decomposition, Estefania Fernandez Barrancos

Dissertations

Dead wood represents 8% of terrestrial carbon stocks and is an important source of habitat and food for decomposer and non-decomposer arthropods. However, anthropogenic disturbance reduces the amount of dead wood, putting at risk the presence of a habitat that is essential for many arthropods and other organisms that rely on it for food and shelter. Forest restoration aims to assist the recovery of ecosystems that have been damaged or destroyed and could be a means to recover both dead wood and its associated arthropod communities. This doctoral dissertation lies at the intersection of climate change, biodiversity loss and ecological …


Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield May 2022

Life After Death – Does Carcass Biodiversity Scale With Carcass Body Size?, Troy Warfield

Biological Sciences Undergraduate Honors Theses

Mammals play a large role in the ecosystems where some, especially large-bodied mammals, act as ecosystem engineers. Mammal carcasses, particularly those of large body mass act as a temporary island of dense nutrients that support other organisms, including other mammal species, for an extended period. Research in this field currently focuses on the link between mammal carcass size and nutrient availably or on non-mammalian size and biodiversity, but little is available on the correlation between mammal carcass size and its influence on ecosystem biodiversity. Here we ask, does the available biomass (i.e., body size) of the carcass affect its role …


Effects Of Dissimilar Silvicultural Techniques On Small Mammal Communities In Michigan's Upper Peninsula, Breanna R. Gusick Jan 2022

Effects Of Dissimilar Silvicultural Techniques On Small Mammal Communities In Michigan's Upper Peninsula, Breanna R. Gusick

Dissertations, Master's Theses and Master's Reports

Small mammal populations, and predators reliant upon them as food resources, are often challenged by conflicting objectives of timber production and maintenance of quality habitat. With over 70% of the landscape forested, and nearly one-third of the land privately owned, Michigan’s Upper Peninsula (UP) is a matrix of independent management strategies. To assess the effects of various silvicultural regeneration methods on small mammal populations in the Upper Peninsula, we trapped small mammals in experimental silviculture plots, whereby treatments varied by regeneration method (amount of residual canopy cover) and site preparation (i.e., control, tip-up, and scarification), and deer exclosures. We used …


Vertebrate Scavenger Diversity And Ecosystem Services Along An Elevational Gradient In Central Nepal, Aishwarya Bhattacharjee Sep 2021

Vertebrate Scavenger Diversity And Ecosystem Services Along An Elevational Gradient In Central Nepal, Aishwarya Bhattacharjee

Dissertations, Theses, and Capstone Projects

A growing number of studies recognize the ecological significance of vertebrate scavengers, and several species belonging to this diverse, functional guild are of high conservation importance around the globe. Studies on taxonomic and functional components of biodiversity often use elevation gradients to comprehensively examine patterns and drivers across multiple spatial scales. Yet, there are relatively few elevational studies on large vertebrates or multi-taxa guilds, and the related variation of their ecosystem services. In particular, scavenger research has largely focused on local-scale studies or regional/global comparisons of local-scale investigations. Moreover, these studies primarily consider taxonomic community characteristics and the patterns of …


Spatial And Non-Spatial Patterns Of Genetic Diversity In Neotropical Bats, Andrea J. Calderon Brito Jan 2021

Spatial And Non-Spatial Patterns Of Genetic Diversity In Neotropical Bats, Andrea J. Calderon Brito

Dissertations and Theses

Macroecological studies that predict genetic diversity and its correlation with other biodiversity dimensions are essential to conservation in a rapidly changing environment. However, in bats (order Chiroptera), studies associating abiotic or ecological traits that could help to predict genetic diversity are scarce, even for singular species. In the Neotropics, the highest concentration of mammal and amphibian genetic diversity has been found in the Andes mountains and the Amazon Rainforest, yet it is an open question whether bat genetic diversity is also higher in these regions, or even if any abiotic factors are correlated with bat genetic diversity. Additionally, it is …


Population Structure Of A Federally Endangered Plant (Astragalus Jaegerianus Munz, Fabaceae) With Limited Range Using Microsatellites, Sueann Neal Dec 2020

Population Structure Of A Federally Endangered Plant (Astragalus Jaegerianus Munz, Fabaceae) With Limited Range Using Microsatellites, Sueann Neal

Electronic Theses, Projects, and Dissertations

Studies on population genetics examine the relationship and effects of population structure, migration, gene flow and demographic history, and are therefore important in the conservation of endangered species. Astragalus jaegerianus, a critically federally endangered species found in a geographically restricted range is investigated to determine population structure and genetic variation. Previous research on A. jaegerianus focused on DNA sequence data for cpDNA and nrDNA showed no variation. Further research on A. jaegerianus utilizing AFLP’s on the whole genome indicated substantial gene diversity and population structure consistent with geographically widespread species. AFLP research is a cost-effective process to identify levels …


The Ecological Value Of Spruce Plantations In Massachusetts, Calvin Ritter Jul 2020

The Ecological Value Of Spruce Plantations In Massachusetts, Calvin Ritter

Masters Theses

The establishment of monoculture plantations of exotic tree species is common practice for supplementing native timber stocks. Such plantations typically provide inferior habitat for wildlife compared to native forest, which may result in a net reduction in biodiversity. However, some studies report that plantations may increase net biodiversity at the landscape scale by introducing novel habitats or supplementing existing natural forests. Using point count surveys, I examined six mature Norway spruce (Picea abies) plantations in western Massachusetts in 2016 and 2017 to evaluate bird use of these habitats relative to native forest stands. Count data were analyzed using …


Frogs Hiding In Plain Sight: Phylogenetic Systematics Of Myanmar’S Occidozyga Species Complex, And The Identification Of A Novel Species, Allison Bogisich May 2019

Frogs Hiding In Plain Sight: Phylogenetic Systematics Of Myanmar’S Occidozyga Species Complex, And The Identification Of A Novel Species, Allison Bogisich

Master's Theses

Different species can be difficult to distinguish from one another when they are morphologically similar. Such cryptic species are the reason many anuran species go undetected. For this study, the taxonomic identity of the Occidozyga complex across Myanmar was investigated. An integrated approach was used combining molecular, morphological and phylogeographic data to better assess its taxonomy. Results indicate the presence of three new candidate species within Occidozyga, and three evolutionarily significant unit (ESU) lineages. Two mitochondrial gene fragments (16S, COI) and one nuclear gene fragment (Rhodopsin) were examined from DNA isolated from forty-seven preserved specimens from the California Academy …


Delineating Metrics Of Diversity For A Snake Community In A Rare Ecosystem, Zachary John Marcou Aug 2018

Delineating Metrics Of Diversity For A Snake Community In A Rare Ecosystem, Zachary John Marcou

Electronic Theses and Dissertations

Snakes are among the least understood vertebrate groups despite their considerable diversity. A diverse community of snakes in an ecosystem can indicate a complex habitat structure that is capable of supporting a robust assemblage of other biota. I used remote photography arrays (RPA) to quantify metrics of diversity for the snake community occurring in a ~7,000–ha tract of contiguous Longleaf Pine (Pinus palustris) Savanna within the Angelina National Forest (ANF; Angelina and Jasper Cos., TX), over the course of two consecutive snake activity seasons. I quantified the snake species richness, Shannon diversity, and Shannon equitability for the snake community in …


How Do Designers Of The Built Environment Attempt To Make Ecological Sustainability Sensory Legible?, Carly L. Bartow Dec 2016

How Do Designers Of The Built Environment Attempt To Make Ecological Sustainability Sensory Legible?, Carly L. Bartow

Architecture Undergraduate Honors Theses

This paper attempts to provide a theoretical framework for making ecosystem function and ecologically sustainable design more perceptible or sensible to people through architecture and the built environment. Design features of the Bertschi School Science Wing and the Bullitt Center in Seattle, Washington are incorporated to illustrate the sensory legibility of ecological sustainability criteria.The criteria are available to designers to help educate a building's occupants on environmentally sustainable design and motivate more sustainable behavior.


A New Adaptive Landscape: Urbanization As A Strong Evolutionary Force, Lauren Christie Breza Dec 2015

A New Adaptive Landscape: Urbanization As A Strong Evolutionary Force, Lauren Christie Breza

Masters Theses

Urbanization is rapidly increasing as human population growth steadily grows, but there is little consensus of the ecological consequence of this population shift and almost no information of the evolutionary consequences for local biodiversity. Nearly two-thirds of the world’s population will live in city centers by 2050 with profound impacts on landscapes that can act as important agents of selection. This study aims to identify 1) the net effect of urbanization on species richness, 2) how phylogenetic diversity varies between urban and rural sites, and 3) the strength of urbanization as a selection pressure. First, a meta-analysis was conducted in …


Conservation Planning In A Changing World, Austin Walker Milt Aug 2015

Conservation Planning In A Changing World, Austin Walker Milt

Doctoral Dissertations

As a science and practice dedicated to preventing, stopping, and reversing negative effects on nature, conservation is constantly faced with new challenges. Combine this fact with the rise of large, freely available datasets and computational power, and the result is a need to advance the methods and conceptual approach to conservation planning. In my dissertation I present novel methods and address research questions that aim to keep conservation science and practice relevant and effective in a changing world. This picture of continual change is illustrated in Chapter 1, in which I explore how the ongoing collection of observations of rare …


Forest Regeneration On The Osa Peninsula, Costa Rica, Manette E. Sandor Dec 2012

Forest Regeneration On The Osa Peninsula, Costa Rica, Manette E. Sandor

Master's Theses

Woody species diversity of secondary forest has the potential to converge with that found in old growth forest. This study is the first to examine multiple aspects of species and reproductive trait diversity, and their relationship to each other, across a successional chronosequence. Species richness and species diversity increases with increasing age of forest. Diaspore size and diversity as well as fruit size generally increased with increasing age of forest, but fruit size diversity did not. Abundance of animal-dispersed species increased whereas wind-dispersed species decreased in abundance over succession. Insect-pollinated individuals were most abundant overall. Diaspore diversity, pollination diversity, and …


Marine Fungi Of U.S. Gulf Of Mexico Barrier Island Beaches: Biodiversity And Sampling Strategy, Allison Kathleen Walker Dec 2012

Marine Fungi Of U.S. Gulf Of Mexico Barrier Island Beaches: Biodiversity And Sampling Strategy, Allison Kathleen Walker

Dissertations

Marine fungi are an important but often overlooked component of marine ecosystems. Primarily saprotrophic, they are vital to coastal nutrient cycling processes and food webs. However, basic marine fungal distribution data are lacking in many parts of the world, as is knowledge of the sampling intensity required to characterize the biodiversity of these communities. The roles of substrate, season and latitude in shaping intertidal ascomycete community structure were examined for the U.S. Gulf of Mexico, and the role of sampling frequency on species richness estimates was also addressed. Best sampling practices were developed and 750 collections of beach detritus, sand …