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Full-Text Articles in Cell Biology

Gpu Deconvolution Wow Result On 2048x2048x32 Plane Z-Series, George Mcnamara Jun 2015

Gpu Deconvolution Wow Result On 2048x2048x32 Plane Z-Series, George Mcnamara

George McNamara

GPU Deconvolution WOW result on 2048x2048x32 plane Z-series ... formerly bad academic code ("you get what you pay for") now impressive

Alternative title: "instant gratification quantitative deconvolution fluorescence microscopy".

http://works.bepress.com/gmcnamara/55/

Please see "74"

http://works.bepress.com/gmcnamara/74/

for 32-bit images from this project (bepress file size limitation prevented me from including them in this ZIP archive).

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Summary: Deconvolution microscopy has historically been painfully slow. The early vendors were:

- Scanalytics (Carrington and Fay), commercialized to try to sell expensive, specialized array processors made by CSPI (the CSPI box likely had less computing power than a first gen smartphone).

- Applied Precision (Sedat …


32-Bit Deconvolution Files Accompanying 55 Page, George Mcnamara Jun 2015

32-Bit Deconvolution Files Accompanying 55 Page, George Mcnamara

George McNamara

ZIP file with 32-bit images accompanying

http://works.bepress.com/gmcnamara/55

Bepress apparently has an ~1 Gigabyte file upload limit so I have placed the 32-bit images of greatest interest here.

See Word document inside for details.


Light Microscopy Reflection Focusing Cells And Coverglass, George Mcnamara May 2015

Light Microscopy Reflection Focusing Cells And Coverglass, George Mcnamara

George McNamara

Light Microscopy Reflection Focusing Cells and Coverglass 20150520Wed

Many light microscopes have the capability of using camera based brightfield, phase contrast, or fluorescence to find the most contrasty specimen focus. When I worked for UIC (1992-1997) we offered this with a combination of Ludl MAC2000 controller, Z-drive, video card thingy, and video camera (most customers at the time used analog video cameras).

Many automated light microscopes now have clever -- and pricey -- autofocus systems based on an NIR LED structured illumination reflecting light off the bottom of the coverglass.

I encourage a simpler approach - my hardware details are …


O-Glcnacylation And Modifications To The Class Ii Transactivator, Ronald Shanderson Apr 2015

O-Glcnacylation And Modifications To The Class Ii Transactivator, Ronald Shanderson

Georgia State Undergraduate Research Conference

No abstract provided.