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Full-Text Articles in Biology

Validation Of Edna Metabarcoding : A Comparison To Traditional Survey Methods In Ozark Streams, Veronica Marian Lee Jan 2022

Validation Of Edna Metabarcoding : A Comparison To Traditional Survey Methods In Ozark Streams, Veronica Marian Lee

Masters Theses

Environmental DNA (eDNA) sampling provides a method for assessing fish communities that has potential as a supplement to traditional sampling methods due to its ability to save time as well as its non-invasive nature. This is a method in which from just one sample, eDNA from multiple individual species are able to be sequenced in tandem and the resulting reads identified to describe a community. In order to evaluate this technique and its efficacy for monitoring fish community diversity, we collected water samples alongside surveys performed by the Missouri Department of Conservation sampling program in summers 2020-21. DNA were extracted …


Effects Of Wastewater Effluent On Fish Fin Morphology Of Larval Fathead Minnows (Pimephales Promelas) And Swimming Performance Of Smallmouth Buffalo (Ictiobus Bubalus), Seth Michael Bogue Jan 2021

Effects Of Wastewater Effluent On Fish Fin Morphology Of Larval Fathead Minnows (Pimephales Promelas) And Swimming Performance Of Smallmouth Buffalo (Ictiobus Bubalus), Seth Michael Bogue

Masters Theses

The Sangamon River flows across central Illinois and is mostly free flowing except in the city of Decatur where it is impounded to form Lake Decatur. The Sanitary District of Decatur (SDD) is located approximately three miles downstream of the Lake Decatur dam. For a significant portion of the year, the stretch of the Sangamon River downstream of SDD is dominated by effluent due to limited discharge from the Lake Decatur dam. This has resulted in heavy nutrient loading, most notably phosphorus, and elevated levels of nickel and other compounds in the downstream section of the river. Smallmouth buffalo ( …


Monitoring Temporal Trends In Catostomidae Larvae In Large Sized River Tributaries, Kellie Nicole Hanser Jan 2020

Monitoring Temporal Trends In Catostomidae Larvae In Large Sized River Tributaries, Kellie Nicole Hanser

Masters Theses

Large river ecosystems can support a complex network of tributaries that provide optimal habitat for fish reproduction. Anthropogenic alteration of rivers and tributaries has been shown to have adverse effects on river fish communities, but few studies have focused on the effects river regulation may have on the reproduction of native suckers (Family Catostomidae). In this study, I evaluated differences in biotic and abiotic factors associated with catostomid reproduction between tributaries of an altered and free-flowing river. I conducted ichthyoplankton sampling using drift nets and larval push nets in tributaries of the Illinois River, which is regulated for navigation, and …


Green And Choking: Exploring The Dynamics Of Seasonal Productivity And Hypoxia In A Great Lakes Area Of Concern And Habitat Blueprint Estuary Using Time-Series Measurements, Anthony D. Weinke Aug 2016

Green And Choking: Exploring The Dynamics Of Seasonal Productivity And Hypoxia In A Great Lakes Area Of Concern And Habitat Blueprint Estuary Using Time-Series Measurements, Anthony D. Weinke

Masters Theses

Although hypoxia (dissolved oxygen <4 mg L-1) in the bottom waters of lakes, reservoirs, and estuaries may be a natural product of stratification in eutrophic or mesotrophic systems, there is increasing concern because the occurrence of hypoxia is spreading in many areas where hypoxia did not previously exist. Part of this new knowledge can be attributed to time-series data from buoy observatories that monitor systems in good weather and in bad, and allowing insight into the inner workings of a lake where sampling only a few times per year would not. This study made use of a five-year time-series of meteorological and water quality data in order to examine the effect of episodic wind-events on stratification and hypoxia within Muskegon Lake, Michigan, as well as performing bi-weekly lake-wide monitoring to evaluate the effects of stratification, hypoxia, and wind-events on the lake. In the wind-event portion of the study, we found that events where wind speeds were above average for an extended period of time occurred fairly frequently on the lake, but that thermal stratification allowed only the strongest events to significantly mix the water column at the buoy location a few times per year. This provided infrequent relief of hypoxia in the bottom waters. The second portion of the study found extensive effects on the water quality and biology in the bottom of the lake due to hypoxia such as increased phosphorus concentrations, enhanced phycocyanin following a strong windevent, and decreased fish abundance, richness, and size. We also found that hypoxia occurred lake-wide at all four sample locations, but was most stable at the deepest point in the lake that was least influenced by wind-events. It is possible that the combination of hypoxia and strong episodic wind-events leads to entrainment of phosphorus-rich waters to the surface initiating or continuing an algal bloom. Hypoxia and wind-event mediated internal loading of phosphorus could be a positive feedback loop for cyanobacterial blooms and hypoxia in Muskegon Lake.


The Effect Of Seasonal Fish Migration On Energy Budgets In Two Coastal Michigan Streams, Emily M. Dean Apr 2016

The Effect Of Seasonal Fish Migration On Energy Budgets In Two Coastal Michigan Streams, Emily M. Dean

Masters Theses

Migratory fish are known to seasonally enter coastal stream systems but the magnitude of the effects these migrations have on stream energy budgets is not fully understood. The Laurentian Great Lakes have several introduced and native adfluvial fish, where only a few studies have investigated the impacts of their migration on energy budgets in Michigan coastal streams. We quantified the contribution of energy from Chinook salmon (Oncorhynchus tshawytscha) muscle and eggs, steelhead (Oncorhynchus mykiss) eggs, and larval white suckers (Catostomus commersonii) to coastal stream energy budgets. Energy densities and energy delivered to streams were estimated using bomb calorimetry and annual …