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Full-Text Articles in Biochemistry, Biophysics, and Structural Biology

Authentication Of A Novel Antibody To Zebrafish Collagen Type Xi Alpha 1 Chain (Col11a1a), Jonathon C. Reeck, Makenna J. Hardy, Xinzhu Pu, Cynthia Keller-Peck, Julia Thom Oxford Sep 2021

Authentication Of A Novel Antibody To Zebrafish Collagen Type Xi Alpha 1 Chain (Col11a1a), Jonathon C. Reeck, Makenna J. Hardy, Xinzhu Pu, Cynthia Keller-Peck, Julia Thom Oxford

Biology Faculty Publications and Presentations

Objective: Extracellular matrix proteins play important roles in embryonic development and antibodies that specifically detect these proteins are essential to understanding their function. The zebrafish embryo is a popular model for vertebrate development but suffers from a dearth of authenticated antibody reagents for research. Here, we describe a novel antibody designed to detect the minor fibrillar collagen chain Col11a1a in zebrafish (AB strain).

Results: The Col11a1a antibody was raised in rabbit against a peptide comprising a unique sequence within the zebrafish Col11a1a gene product. The antibody was affinity-purified and characterized by ELISA. The antibody is effective for immunoblot and immunohistochemistry …


Infection And Diet-Induced Gut Dysbiosis: Impact On Sleep Quality In Danio Rerio, Benjamin Williams May 2021

Infection And Diet-Induced Gut Dysbiosis: Impact On Sleep Quality In Danio Rerio, Benjamin Williams

Honors College

A known bidirectional relationship between intestinal microflora and the central nervous system, coined the gut-brain-axis, has stimulated work on the association between gut dysbiosis and inflammation, and sleep quality. Previous studies in the Hayes Lab have reported that a high fat (HF) diet was correlated with immobile phases, a marker of low motility during sleep found in some neurological disease and sleep duration[1]. Long sleep duration (>1 S.D. above norms for age) is associated with poor sleep quality or sleep fragmentation in participants who are overweight or obese according to body mass index values[2]. The current work utilizes a …


Carbon Dots For Specific “Off-On” Sensing Of Co2+ And Edta For In Vivo Bioimaging, Xiangping Wen, Guangming Wen, Wenyan Li, Zhonghua Zhao, Xine Duan, Wenjun Yan, John F. Trant, Yingqi Li Apr 2021

Carbon Dots For Specific “Off-On” Sensing Of Co2+ And Edta For In Vivo Bioimaging, Xiangping Wen, Guangming Wen, Wenyan Li, Zhonghua Zhao, Xine Duan, Wenjun Yan, John F. Trant, Yingqi Li

Chemistry and Biochemistry Publications

Fluorescent carbon dots (CDs) were hydrothermally synthesized from a mixture of frozen tofu, ethylenediamine and phosphoric acid in an efficient 64% yield. The resulting CDs exhibit good water solubility, low cytotoxicity, high stability, and excellent biocompatibility. The CDs selectively and sensitively detect Co2+ through fluorescent quenching with a detection limit of 58 nM. Fluorescence can be restored through the introduction of EDTA, and this phenomenon can be used to quantify EDTA in solution with a detection limit of 98 nM. As both analytes are detected by the same CD platform, this is an “off-on” fluorescence sensor for Co2+ and EDTA. …