Other Animal Sciences Commons^™

An Ecological Study Of The Anurans In Tea Plantations In A Biodiversity Hotspot, Lilly M. Eluvathingal

FIU Electronic Theses and Dissertations

Increasing human population size is increasing the demand for resources like timber, oil, tea, coffee, and other crops. Plantation crops mimic some aspects of native habitats, and there are studies that report the presence of some native anuran biodiversity in plantations. I focused on tea plantations in the Western Ghats-Sri Lanka Biodiversity Hotspot and studied the diversity and health of anurans in different habitats found within a tea cultivation area, near Munnar region in the Western Ghats, India. The landscape includes tea bushes, native evergreen shola forest patches, and eucalyptus forest stands. I reviewed 40 studies comparing amphibian species richness …

Goats Learn Socially From Humans In A Spatial Problem-Solving Task, Christian Nawroth, Luigi Baciadonna, Alan G. Mcelligott

Social Cognition Collection

Domestication drives changes in animal cognition and behaviour. In particular, the capacity of dogs to socially learn from humans is considered a key outcome of how domestication shaped the canid brain. However, systematic evidence for social learning from humans in other domestic species is lacking and makes general conclusions about how domestication has affected cognitive abilities difficult. We assessed spatial and social problem-solving abilities in goats (Capra hircus) using a detour task, in which food was placed behind an inward or outward V-shaped hurdle. Goats performed better in the outward than in the inward detour without human demonstration. Importantly, a …

Judgement Bias In Goats (Capra Hircus): Investigating The Effects Of Human Grooming, Luigi Baciadonna, Christian Nawroth, Alan G. Mcelligott

Emotion Collection

Animal emotional states can be investigated by evaluating their impact on cognitive processes. In this study, we used a judgement bias paradigm to determine if shortterm positive human-animal interaction (grooming) induced a positive affective state in goats. We tested two groups of goats and trained them to discriminate between a rewarded and a non-rewarded location over nine training days. During training, the experimental group (nD9) was gently groomed by brushing their heads and backs for five min over 11 days (nine training days, plus two testing days, total time 55 min). During training, the control group (nD10) did not experience …

Evaluating A Squirrel Monkey Troop In Natural Rehabilitation: An Assessment Of Population And Behavior Of Saimiri Sciureus In Preparation For Relocation From Sumak Allpa To Yasuní National Park, Bria Riggs

Independent Study Project (ISP) Collection

Natural rehabilitation and translocation of primate species provide the opportunity for recovery of individuals and repopulation of species in the wild. However, there are few successful examples of primate translocation around the world, and no successful cases in Ecuador. This study assesses the population and overall behavioral activity of a troop of Saimiri sciureus on Sumak Allpa Island, Orellana, Ecuador from November 6^th to November 27^th, 2016. This specific troop, referred to as the Yasuní troop, is scheduled to be translocated from Sumak Allpa to Yasuní National Park in March or April of 2017, and would be …

Reef Fish And Coral Assemblages On Hospital Point And Near Bastimentos Island, Panama, Elaine Shen

Independent Study Project (ISP) Collection

Because worldwide declines coral reef health are of major concern, studying coral reefs through the lens of conservation efforts at local scales is essential for determining and monitoring effective policy measures. In the Bocas del Toro Archipelago, there are conflicts of interest between exploitative rapid tourism development, overfishing practices, and national efforts to conserve the local marine biodiversity. Coral and reef fish species abundance richness, diversity, evenness, and similarity were measured to see how coral and reef fish assemblages changed between protected and unprotected areas. A total of 329 fish and 322.5 square meters of benthos were analyzed using underwater …

The Development Of A Reproductive Population Of Chorongos: Intergroup Interactions, Dispersal, And Sexual Behavior Of Lagothrix Lagotricha Poeppigii In Natural Rehabilitation On The Island Of Sumak Allpa, Ecuador, Rachel Gallegos

Independent Study Project (ISP) Collection

The lowland woolly monkey (Lagothrix lagotricha poeppigii) is vulnerable due to various human pressures, as they are especially sensitive to stress and habitat degradation. Due to their low rate of success in captivity, the few institutions that have tried to create and maintain breeding populations for conservation purposes are no longer able or willing to do so. Sumak Allpa, an NGO in the Orellana province of the Ecuadorian Amazon, currently has the only repopulation project in Ecuador with the long-term goal of maintaining a reproductive population and releasing groups of woolly monkeys back into the wild. In a …

Resource Quality And Defense: Feeding Behaviors And Female Territoriality In Two Species Of Tropical Hummingbird, Briana Grether

Independent Study Project (ISP) Collection

The study "Resource Quality and Defense: Feeding Behaviors and Female Territoriality in Two Species of Tropical Hummingbird" investigates the feeding behaviors and territoriality of hummingbirds at a flowering shrub of the Gesneriaceae family, Besleria solanoides. Four 1.25-hour observation periods were completed each day, rotating between four different observation sites. During each observation period, the sugar concentration of nectar and number of flowers on each bush was measured, and each time a hummingbird entered the area the following data was recorded: species, sex, time of arrival, duration of visit, number of flowers probed, number of perches, duration of longest perches, any …

Humanity Balancing On A Turtle’S Back: Perceptions And Values Of Sea Turtle Conservation Among Different Demographics At Four Sites In The Bocas Del Toro Archipelago Bocas Del Toro, Panama, Roxanne Hoorn

Independent Study Project (ISP) Collection

Being the ancient, world traveling, iconic mega-fauna they are, sea turtles have found their way into cultures and traditions around the world, often holding great prestige. Along with their mystical qualities, sea turtles have also been intricately intertwined in the livelihoods of cultures around the globe, utilized for food, jewelry, income, and more recently, scientific research. The ways in which humans around the world perceive the value of this species varies greatly, often causing conflict between those who wish to protect and conserve sea turtles, and those looking to continue using turtles as either a source of income or food. …

Microhabitat Use Affects Goby (Gobiidae) Cue Choice In Spatial Learning Task, G. E. White, C. Brown

Culum Brown, PhD

This study investigated whether spatial learning ability and cue use of gobies (Gobiidae) from two contrasting habitats differed in a spatial task. Gobies were collected from the spatially complex rock pools and dynamic, homogenous sandy shores. Fishes were trained to locate a shelter under the simulated threat of predation and it was determined whether they used local or extra-maze (global) and geometric cues to do so. It was hypothesized that fishes from rock pools would outperform fishes from sandy shores in their ability to relocate shelter and the two groups would differ in their cue use. It was found that …

Predator Recognition And Responses In The Endangered Macquarie Perch (Macquaria Australasica), Culum Brown, Jennifer Morgan

Culum Brown, PhD

Macquarie perch, Macquaria austalasica, is an endangered species endemic to southern Australia whose distribution is highly fragmented and continues to decline. Key threatening processes include habitat destruction, dams and weirs, overfishing and interactions with introduced species. Here, we examined the responses of small and large Macquarie perch to two native predators and to the introduced redfin perch, Perca fluviatilis. Our results showed that Macquarie perch generally avoided large-bodied native predators but was attracted to small-bodied native predators. Responses to large and small redfin perch lay between these two extremes, suggesting that the Macquarie perch does treat these foreign fish as …

Laterality Enhances Numerical Skills In The Guppy, Poecilia Reticulata, Marco Dadda, Christian Agrillo, Angelo Bisazza, Culum Brown

Culum Brown, PhD

It has been hypothesized that cerebral lateralization can significantly enhance cognition and that this was one of the primary selective forces shaping its wide-spread evolution amongst vertebrate taxa. Here, we tested this hypothesis by examining the link between cerebral lateralization and numerical discrimination. Guppies, Poecilia reticulata, were sorted into left, right and non-lateralized groups using a standard mirror test and their numerical discrimination abilities tested in both natural shoal choice and abstract contexts. Our results show that strongly lateralized guppies have enhanced numerical abilities compared to non-lateralized guppies irrespective of context. These data provide further credence to the notion that …

Rescued Goats At A Sanctuary Display Positive Mood After Former Neglect, Elodie F. Briefer, Alan G. Mcelligott

Elodie Briefer, PhD

Moods influence cognitive processes in that people in positive moods expect more positive events to occur and less negative ones (“optimistic bias”), whereas the opposite happens for people in negative moods (“pessimistic bias”). The evidence for an effect of mood on cognitive bias is also increasing in animals, suggesting that measures of optimism and pessimism could provide useful indicators of animal welfare. For obvious ethical reasons, serious poor treatments cannot be easily replicated in large mammals in order to study their long-term effects on moods. In this study, we tested the long-term effects (>2 years) of prior poor welfare …

Artificial Neural Network Approach For Revealing Individuality, Group Membership And Age Information In Goat Kid Contact Calls, Livio Favaro, Elodie F. Briefer, Alan G. Mcelligott

Elodie Briefer, PhD

Machine learning techniques are becoming an important tool for studying animal vocal communication. The goat (Capra hircus) is a very social species, in which vocal communication and recognition are important. We tested the reliability of a Multi-Layer Perceptron (feed-forward Artificial Neural Network, ANN) to automate the process of classification of calls according to individual identity, group membership and maturation in this species. Vocalisations were obtained from 10 half-sibling (same father but different mothers) goat kids, belonging to 3 distinct social groups. We recorded 157 contact calls emitted during first week, and 164 additional calls recorded from the same individuals at …

Emotions In Goats: Mapping Physiological, Behavioural And Vocal Profiles, Elodie F. Briefer, Federico Tettamanti, Alan G. Mcelligott

Elodie Briefer, PhD

Emotions are important because they enable the selection of appropriate behavioural decisions in response to external or internal events. Techniques for understanding and assessing animal emotions, and particularly positive ones, are lacking. Emotions can be characterized by two dimensions: their arousal (bodily excitation) and their valence (negative or positive). Both dimensions can affect emotions in different ways. It is thus crucial to assess their effects on biological parameters simultaneously, so that accurate indicators of arousal and valence can be identified. To find convenient and noninvasive tools to assess emotions in goats, Capra hircus, we measured physiological, behavioural and vocal responses …

Fallow Bucks Attend To Vocal Cues Of Motivation And Fatigue, Benjamin J. Pitcher, Elodie F. Briefer, Elisabetta Vannoni, Alan G. Mcelligott

Elodie Briefer, PhD

Vocalizations encode a range of information about the caller, and variation in calling behavior and vocal structure may provide listeners with information about the motivation and condition of the caller. Fallow bucks only vocalize during the breeding season and can produce more than 3000 groans per hour. Males modulate their calling rates, calling faster when other calling males and/or females are nearby. Groans also reveal caller fatigue, becoming shorter and higher pitched toward the end of the rut. Thus, fallow deer groans vary both over very short (minute to minute) and longer timescales (the rut). However, no studies have investigated …

Mother Goats Do Not Forget Their Kids’ Calls, Elodie F. Briefer, Mónica Padilla De La Torre, Alan G. Mcelligott

Elodie Briefer, PhD

Parent–offspring recognition is crucial for offspring survival. At long distances, this recognition is mainly based on vocalizations. Because of maturation-related changes to the structure of vocalizations, parents have to learn successive call versions produced by their offspring throughout ontogeny in order to maintain recognition. However, because of the difficulties involved in following the same individuals over years, it is not clear how long this vocal memory persists. Here, we investigated long-term vocal recognition in goats. We tested responses of mothers to their kids’ calls 7–13 months after weaning. We then compared mothers’ responses to calls of their previous kids with …

Semi-Wild Chimpanzees Open Hard-Shelled Fruits Differently Across Communities, Bruce Rawlings, Marina Davilla-Ross, Sarah T. Boysen

Sarah Boysen, PhD

Researchers investigating the evolutionary roots of human culture have turned to comparing behaviours across nonhuman primate communities, with tool-based foraging in particular receiving much attention. This study examined whether natural extractive foraging behaviours other than tool selection differed across nonhuman primate colonies that had the same foods available. Specifically, the behaviours applied to open the hard-shelled fruits of Strychnos spp. were examined in three socially separate, semi-wild colonies of chimpanzees (Pan troglodytes) that lived under shared ecological conditions at Chimfunshi Wildlife Orphanage, and were comparable in their genetic makeup. The chimpanzees (N = 56) consistently applied six techniques to open …

Mother--Offspring Recognition Via Contact Calls In Cattle, Bos Taurus, Mónica Padilla De La Torre, Elodie F. Briefer, Brad M. Ochocki, Alan G. Mcelligott, Tom Reader

Elodie Briefer, PhD

Individual recognition in gregarious species is fundamental in order to avoid misdirected parental investment. In ungulates, two very different parental care strategies have been identified: ‘hider’ offspring usually lie concealed in vegetation whereas offspring of ‘follower’ species remain with their mothers while they forage. These two strategies have been suggested to impact on mother--offspring vocal recognition, with unidirectional recognition of the mother by offspring occurring in hiders and bidirectional recognition in followers. In domestic cattle, Bos taurus, a facultative hider species, vocal communication and recognition have not been studied in detail under free-ranging conditions, where cows and calves can graze …

Acoustic Analysis Of Cattle (Bos Taurus) Mother–Offspring Contact Calls From A Source–Filter Theory Perspective, Mónica Padilla De La Torre, Elodie F. Briefer, Tom Reader, Alan G. Mcelligott

Elodie Briefer, PhD

Cattle vocalisations have been proposed as potential indicators of animal welfare. How-ever, very few studies have investigated the acoustic structure and information encoded in these vocalisations using advanced analysis techniques. Vocalisations play key roles in a wide range of communication contexts; e.g. for individual recognition and to help coordinate social behaviours. Two factors have greatly assisted our progress in developing an understanding of animal vocal communication. Firstly, more rigorous call analysis methods allow us to describe the variation in the vocal parameters in unprecedented detail. Secondly, the adoption of the “source–filter theory” of call production links the acoustic structure of …

Autonomic Nervous System Reactivity In A Free-Ranging Mammal: Effects Of Dominance Rank And Personality, Elodie F. Briefer, James A. Oxley, Alan G. Mcelligott

Elodie Briefer, PhD

Modulation of the autonomic nervous system (ANS) activity allows animals to effectively respond to internal and external stimuli in everyday challenges via changes in, for example, heart and respiration rate. Various factors, ranging from social such as dominance rank to internal such as personality or affective states can impact animal physiology. Our knowledge of the combinatory effects of social and internal factors on ANS basal activity and reactivity, and of the importance that each factor has in determining physiological parameters, is limited, particularly in nonhuman, free-ranging animals. In this study, we tested the effects of dominance rank and personality (assessed …

Overcoming Response Bias Using Symbolic Representations Of Number By Chimpanzees (Pan Troglodytes), Sarah T. Boysen, Kimberly L. Mukobi, Gary G. Berntson

Sarah Boysen, PhD

We previously reported that chimpanzees were unable to optimally select the smaller of two candy arrays in order to receive a larger reward. When Arabic numerals were substituted for the candy arrays, animals who had had prior training with numerical symbols showed an immediate and significant improvement in performance and were able to select reliably the smaller numeric representation in order to obtain a larger reward. Poor performance with candy arrays was interpreted as reflecting a response bias toward the intrinsic incentive and/or perceptual features of the larger array. In contrast, the Arabic numerals represent numerosity symbolically and appear to …

Spontaneous Discrimination Of Natural Stimuli By Chimpanzees (Pan Troglodytes), David A. Brown, Sarah T. Boysen

Sarah Boysen, PhD

Six chimpanzees (Pan troglodytes) were presented with pairs of color photographic images of 5 different categories of animals (cat, chimp, gorilla, tiger, fish). The subjects responded to each pair using symbols for "same" and "different." Both within- and between-category discriminations were tested, and all chimpanzees classified the image pairs in accordance with the 5 experimenter-defined categories under conditions of nondifferential reinforcement. Although previous studies have demonstrated identification or discrimination of natural categories by nonhuman animals, subjects were typically differentially reinforced for their responses. The present findings demonstrate that chimpanzees can classify natural objects spontaneously and that such classifications may be …

Chimpanzee Research: An Examination Of Its Contribution To Biomedical Knowledge And Efficacy In Combating Human Diseases, Jarrod Bailey, Jonathan Balcombe, Theodora Capaldo

Jonathan Balcombe, PhD

Research on captive chimpanzees incurs considerable animal welfare, ethical and financial costs. Advocates of such research claim these costs are outweighed by substantial advancements in biomedical knowledge, and that the genetic similarity of chimpanzees to humans enables the former to make critical contributions to preventing, diagnosing and combating human diseases. To assess these claims, we examined the disciplines investigated in 749 studies of captive chimpanzees published from 1995-2004 inclusive, and subjected 95 randomly selected papers to a detailed citation analysis:

49.5% (47/95) of papers had not been cited at the time of this study; 38.5% (34/95) were cited by 116 …

An Examination Of Chimpanzee Use In Human Cancer Research, Jarrod Bailey

Jarrod Bailey, PhD

Advocates of chimpanzee research claim the genetic similarity of humans and chimpanzees make them an indispensable research tool to combat human diseases. Given that cancer is a leading cause of human death worldwide, one might expect that if chimpanzees were needed for, or were productive in, cancer research, then they would have been widely used. This comprehensive literature analysis reveals that chimpanzees have scarcely been used in any form of cancer research, and that chimpanzee tumours are extremely rare and biologically different from human cancers. Often, chimpanzee citations described peripheral use of chimpanzee cells and genetic material in predominantly human …

An Analysis Of The Use Of Dogs In Predicting Human Toxicology And Drug Safety, Jarrod Bailey, Michelle Thew, Michael Balls

Jarrod Bailey, PhD

Dogs remain the main non-rodent species in preclinical drug development. Despite the current dearth of new drug approvals and meagre pipelines, this continues, with little supportive evidence of its value or necessity. To estimate the evidential weight provided by canine data to the probability that a new drug may be toxic to humans, we have calculated Likelihood Ratios (LRs) for an extensive dataset of 2,366 drugs with both animal and human data, including tissue-level effects and Medical Dictionary for Regulatory Activities (MedDRA) Level 1–4 biomedical observations. The resulting LRs show that the absence of toxicity in dogs provides virtually no …

Non-Human Primates In Neuroscience Research: The Case Against Its Scientific Necessity, Jarrod Bailey, Katy Taylor

Jarrod Bailey, PhD

Public opposition to non-human primate (NHP) experiments is significant, yet those who defend them cite minimal harm to NHPs and substantial human benefit. Here we review these claims of benefit, specifically in neuroscience, and show that: a) there is a default assumption of their human relevance and benefit, rather than robust evidence; b) their human relevance and essential contribution and necessity are wholly overstated; c) the contribution and capacity of non-animal investigative methods are greatly understated; and d) confounding issues, such as species differences and the effects of stress and anaesthesia, are usually overlooked. This is the case in NHP …

Monkey-Based Research On Human Disease: The Implications Of Genetic Differences, Jarrod Bailey

Jarrod Bailey, PhD

Assertions that the use of monkeys to investigate human diseases is valid scientifically are frequently based on a reported 90–93% genetic similarity between the species. Critical analyses of the relevance of monkey studies to human biology, however, indicate that this genetic similarity does not result in sufficient physiological similarity for monkeys to constitute good models for research, and that monkey data do not translate well to progress in clinical practice for humans. Salient examples include the failure of new drugs in clinical trials, the highly different infectivity and pathology of SIV/HIV, and poor extrapolation of research on Alzheimer’s disease, Parkinson’s …

An Assessment Of The Role Of Chimpanzees In Aids Vaccine Research, Jarrod Bailey

Jarrod Bailey, PhD

Prior to Simian Immunodeficiency Virus (SIV)-infected macaques becoming the ‘model of choice’ in the 1990s, chimpanzees were widely used in AIDS vaccine research and testing. Faced with the continued failure to develop an effective human vaccine, some scientists are calling for a return to their widespread use. To assess the past and potential future contribution of chimpanzees to AIDS vaccine development, databases and published literature were systematically searched to compare the results of AIDS vaccine trials in chimpanzees with those of human clinical trials, and to determine whether the chimpanzee trials were predictive of the human response. Protective and/or therapeutic …

Lessons From Chimpanzee-Based Research On Human Disease: The Implications Of Genetic Differences, Jarrod Bailey

Jarrod Bailey, PhD

Assertions that the use of chimpanzees to investigate human diseases is valid scientifically are frequently based on a reported 98–99% genetic similarity between the species. Critical analyses of the relevance of chimpanzee studies to human biology, however, indicate that this genetic similarity does not result in sufficient physiological similarity for the chimpanzee to constitute a good model for research, and furthermore, that chimpanzee data do not translate well to progress in clinical practice for humans. Leading examples include the minimal citations of chimpanzee research that is relevant to human medicine, the highly different pathology of HIV/AIDS and hepatitis C virus …

Animal Carcinogenicity Studies: 3. Alternatives To The Bioassay, Andrew Knight, Jarrod Bailey, Jonathan Balcombe

Jarrod Bailey, PhD

Conventional animal carcinogenicity tests take around three years to design, conduct and interpret. Consequently, only a tiny fraction of the thousands of industrial chemicals currently in use have been tested for carcinogenicity. Despite the costs of hundreds of millions of dollars and millions of skilled personnel hours, as well as millions of animal lives, several investigations have revealed that animal carcinogenicity data lack human specificity (i.e. the ability to identify human non-carcinogens), which severely limits the human predictivity of the bioassay. This is due to the scientific inadequacies of many carcinogenicity bioassays, and numerous serious biological obstacles, which render profoundly …