Aquaculture and Fisheries Commons^™

Blanding’S Turtle (Emydoidea Blandingii): Species Conservation Assessment, Melissa J. Panella, Colleen Rothe-Groleau

Nebraska Game and Parks Commission: Publications

The primary goal in development of at-risk species conservation assessments is to compile biological and ecological information that may assist conservation practitioners in making decisions regarding the conservation of species of interest. The Nebraska Natural Legacy Project recognizes the Blanding’s turtle (Emydoidea blandingii) as a Tier 1 at-risk species. Some general management recommendations are made here regarding Blanding’s turtles; however, conservation practitioners will need to use professional judgment to make specific management decisions based on objectives, location, and a multitude of variables. This resource was designed to share available knowledge of this at-risk turtle that will aid in the decision-making …

Gulls, Martin S. Lowney, Scott F. Beckerman, Scott C. Barras, Thomas W. Seamans

Wildlife Damage Management Technical Series

Abundant gull (Figure 1) populations in North America have led to a variety of conflicts with people. Gulls cause damage at aquaculture facilities and other properties, and often collide with aircraft. Their use of structures on and near water results in excessive amounts of bird droppings on boats and docks. Their presence near outdoor dining establishments, swimming beaches, and recreational sites can lead to negative interactions with people. Large amounts of gull fecal material pollutes water and beaches resulting in drinking water contamination and swim bans. A combination of dispersal techniques, exclusion and limited lethal control may reduce damage to …

Molecular Analysis Confirming The Introduction Of Nile Crocodiles, Crocodylus Niloticus Laurenti 1768 (Crocodylidae), In Southern Florida, With An Assessment Of Potential For Establishment, Spread, And Impacts., Michael R. Rochford, Kenneth L. Krysko, Frank J. Mazzotti, Matthew W. Shirley, Mark W. Parry, Joseph A. Wasilewski, Jeffrey S. Beauchamp, Christpher R. Gillette, Edward F. Metzger Iii, Michiko A. Squires, Louis A. Somma

Papers in Herpetology

The state of Florida, USA, has more introduced herpetofauna than any other governmental region on Earth. Four species of nonnative crocodilians have been introduced to Florida (all since 1960), one of which is established. Between 2000–2014 we field-collected three nonnative crocodilians in Miami-Dade County, Florida, and one in Hendry County, Florida. We used DNA barcoding and molecular phylogenetics to determine species identification and native range origin. Also, we described diet, movement, and growth for one crocodile. Our molecular analyses illustrated that two of the crocodiles we collected are most closely related to Nile Crocodiles (Crocodylus niloticus) from South Africa, suggesting …

Tiger Salamanders Disappearing In Region, Dennis M. Ferraro

School of Biological Sciences: Faculty Publications

"Where have all the salamanders gone?" 'This is a question I have been increasingly asked over the past five to six years from area residents. It seems we are observing a dramatic population decline of the western barred tiger salamander in parts of Southeast Nebraska. The western barred tiger salamander (Ambystoma mavortium) is one of only two salamanders in Nebraska. Over the past two years, none have been found in southeast Nebraska.

Salamanders, like all amphibians, are excellent indicator species. In many cases they act like the iconic canary in the mine shaft, telling us when to run …

The Status Of Fishes In The Missouri River, Nebraska: Selected Ancient Fishes, Kirk D. Steffensen

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Several ancient fish species have inhabited the Missouri River and its tributaries for thousands of years prior to major mainstem modifications and fragmentation. However post-anthropogenic modifications, populations of these ancient fish species have been highly diminished. Therefore, the objective of this study was to use historic and current ichthyological records to determine the past and present status for Chestnut Lamprey Ichthyomyzon castaneus, Silver Lamprey Ichthyomyzon unicuspis, Bowfin Amia calva, American Eel Anguilla rostrata, and Burbot Lota lota. Currently, these species are rarely captured and perhaps extirpated from Nebraska waters.

Spreading Holiday Spirit And Northwestern Salamanders, Ambystoma Gracile (Baird 1859) (Caudata: Ambystomatidae), Across The Usa, Michael R. Rochford, Jeffrey M. Lemm, Kenneth Krysko, Louis A. Somma, Robert W. Hansen, Frank J. Mazzotti

Papers in Herpetology

Introduced species of amphibians and reptiles are of growing conservation concern (Bury and Luckenbach 1976; Krysko et al. 2011; Meshaka 2011). Unintentional introductions result largely from individuals escaping from enclosures or hitch-hiking in cargo or on vehicles, whereas intentional introductions occur primarily because a species is perceived to be of value to humans or from deliberately releasing sick or unwanted animals, including pets (Kraus 2009; Krysko et al. 2011). In Florida, most known introductions are directly related to the pet trade, but about 12% are related to the cargo pathway (Krysko et al. 2011). In this paper, we report the …

Ecology And Management Of Superabundant Fish Populations, Nathaniel T. Stewart

School of Natural Resources: Dissertations, Theses, and Student Research

Fish population biomasses can reach extreme levels; we term these populations superabundant fish populations. Superabundant fish populations may negatively affect aquatic communities and anglers, necessitating the effective management of the superabundant fish populations. However, there are gaps in our understanding of these populations. The gaps in our understanding hamper our ability to predict effects on valuable sportfisheries and to effectively manage superabundant fish populations. The overall goal of my thesis research is to provide further insight into the ecology of superabundant fish populations and to provide information that will aid in their effective management. First, we described a new method …

Genetic And Morphological Variation In Ecuadorian Astroblepid Catfishes, Katherine M. Lawry

School of Natural Resources: Dissertations, Theses, and Student Research

The Andean ichthyofauna remains a poorly understood component of Neotropical biodiversity, and stands in stark contrast to the lowland ichthyofauna in terms of number of species and range of distribution. The Climate Variability Hypothesis (CVH) predicts rapid turnover of species along elevational gradients in tropical climates, but it remains unclear whether stream fishes follow this pattern. Astroblepid catfishes represent a distinctive assemblage of species that inhabit high elevation streams throughout the Andes from Panama to Bolivia, and constitute the only native fish family present in the Ecuadorian highland region. In this research, population samples of Astroblepids collected throughout Ecuador’s Napo …

Spatiotemporal Variation In Flow-Dependent Recruitment Of Long-Lived Riverine Fish: Model Development And Evaluation, Daisuke Goto, Martin J. Hamel, Jeremy J. Hammen, Mathew L. Rugg, Mark A. Pegg, Valery E. Forbes

School of Biological Sciences: Faculty Publications

Abstract Natural flow regimes can play a major role as an overarching ecosystem driver in reproduction and recruitment of riverine fishes. Human needs for freshwater however have altered hydrology of many riverine systems worldwide, threatening fish population sustainability. To understand and predict how spatiotemporal dynamics of flow regimes influence reproductive and recruitment variability, and ultimately population sustainability of shovelnose sturgeon (Scaphirhynchus platorynchus), we develop a spatially explicit (1D) individual-based population model that mechanistically (via energetics-based processes) simulates daily activities (dispersal, spawning, foraging, growth, and survival). With field observations of sturgeon and habitat conditions in a major tributary of …

The Status Of Fishes In The Missouri River, Nebraska: Lake Sturgeon (Acipenser Fulvescens), Kirk D. Steffensen, Sam Stukel, Dane A. Shuman

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Lake Sturgeon (Acipenser fulvescens) occurrences in the Missouri River along Nebraska’s eastern border are historically sporadic and rare. Presently, the wild Lake Sturgeon population in this river reach may be extirpated. A Recovery Program initiated by the Missouri Department of Conservation (MDC) has stocked almost 150,000 hatchery-reared Lake Sturgeon into the lower Missouri River at several sites in Missouri. As a result, the number of Lake Sturgeon collected has increased. Since monitoring began in 2003, no Lake Sturgeon have been collected above Gavins Point Dam while 40 fish were collected downstream of Gavins Point Dam. The majority of …

The Status Of Fishes In The Missouri River, Nebraska: Pallid Sturgeon (Scaphirhynchus Albus), Kirk D. Steffensen, Dane A. Shuman, Robert A. Klumb, Sam Stukel

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

Anthropogenic alterations to the Missouri River have placed the Pallid Sturgeon (Scaphirhynchus albus) population in jeopardy and contributed to their listing as an endangered species. Pallid sturgeon were always less common than the sympatric Shovelnose Sturgeon (S. platorynchus); however, Pallid Sturgeon seemed to be more affected by river alterations as the river sturgeon ratio has become more skewed towards Shovelnose Sturgeon. Shortly after listing, population augmentation with hatchery produced Pallid Sturgeon began to supplement the diminishing wild population. Therefore, the objective of this study was to present the current population status of the Pallid Sturgeon in …

The Status Of Fishes In The Missouri River, Nebraska: Shovelnose Sturgeon (Scaphirhynchus Platorynchus), Kirk D. Steffensen, Sam Stukel, Dane A. Shuman

Transactions of the Nebraska Academy of Sciences and Affiliated Societies

The Shovelnose Sturgeon Scaphirhynchus platorynchus remains the most abundant riverine sturgeon species in North American despite the anthropogenic modifications that have occurred throughout their historic range; however, their populations have declined throughout Nebraska since the construction of Fort Randall and Gavins Point Dams. Therefore, the objective of this study was to present the current status of Shovelnose Sturgeon in the Missouri River along Nebraska’s border. Data was acquired from 2003 to 2012 from all reaches of the Missouri River along Nebraska’s eastern border. Catch rates of Shovelnose Sturgeon increased in a downstream trend and were highest in the reach below …

Accuracy Or Precision: Implications Of Sample Design And Methodology On Abundance Estimation, Lucas K. Kowalewski

School of Natural Resources: Dissertations, Theses, and Student Research

Estimation of population size by spatially replicated counts (point-count method) has been used for many large-scale animal-monitoring programs, yet its application in aquatic environments has been limited. Multiple site-specific estimates of abundance can be averaged and combined with covariate data to predict total abundance across an area of interest. Covariate data also provide an understanding of the relationship between abundance and habitat use, which is a fundamental interest of many animal-population investigations. Design of sampling scenarios for point-count population-estimate surveys can influence the accuracy and precision of the population estimate. The first objective of this study was to examine how …

A Population Model For Walleye In Nebraska Irrigation Reservoirs, Robert A. Kill

School of Natural Resources: Dissertations, Theses, and Student Research

Understanding how and why fish population size changes between years is a central theme in fisheries ecology. Fishery agencies have limited time and financial resources, thus there is a need for a quantitative way to direct the limited time and financial resources so agencies can manage fisheries more efficiently. I developed a tool for fishery managers that synthesizes common population indices and evaluated the relative importance of those indices given varying uncertainty in age-0 walleye Sander vitreus survival. Under most circumstances, I determined that resources are best utilized in reducing age-0 survival uncertainty when understanding walleye population growth. I applied …

Exploitation Of Channel Catfish In Nebraska Flood-Control Reservoirs, Christopher Lee Wiley

School of Natural Resources: Dissertations, Theses, and Student Research

Channel catfish Ictalurus punctatus, is a popular sportfish in North America, and is the third most-sought fish species in Nebraska. Exploitation rates of channel catfish populations have been estimated to be substantial in states neighboring Nebraska. Despite the popularity of channel catfish, little is known about the exploitation of channel catfish populations in Nebraska. The objectives of this study were to estimate the exploitation rates of channel catfish populations, identify the length bias of angling for channel catfish, and identify the self-imposed length limits for channel catfish at flood-control reservoirs of Nebraska. The software package Program Mark was used to …

Population Characteristics, Development Of A Predictive Population Viability Model, And Catch Dynamics For Pallid Sturgeon In The Lower Missouri River, Kirk D. Steffensen

School of Natural Resources: Dissertations, Theses, and Student Research

Population characteristics and long-term population trends of pallid sturgeon Scaphirhynchus albus in the lower Missouri River are relatively unknown. As recovery efforts continue, understanding and quantifying these characteristics and trends are critical for species recovery and future management decisions. Therefore, the objectives of this study were to determine the pallid sturgeon population characteristics, predict changes to the pallid sturgeon population based on different management and life history scenarios, and examine trot line catch dynamics in the lower Missouri River. Catch rates for pallid sturgeon collected with gill nets did not significantly change while catch rates using trot lines significantly declined …

Swimways: Protecting Paddlefish Through Movement-Centered Management, Brenda M. Pracheil, Mark A. Pegg, Larkin A. Powell, Gerald Mestl

School of Natural Resources: Faculty Publications

Attempts to mitigate lack of formal interjurisdictional paddlefish management have been made in the United States through the Mississippi River Interstate Cooperative Resource Association (MICRA). We used 1988–2009 data from the MICRA paddlefish (Polyodon spathula) stock assessment database—a database containing mark–recapture and biometric information on more than 30,000 individually marked wild paddlefish and more than 2 million hatchery-origin paddlefish—to estimate survival and movement across large and potentially biologically relevant spatial scales. Paddlefish frequently moved between political jurisdictions with differing conservation strategies and harvest regulations and showed differences in survival parameter estimates throughout their range. We argue that the degree of …

Topeka Shiner (Notropis Topeka): Species Conservation Assessment, Melissa J. Panella

Nebraska Game and Parks Commission: Publications

The primary goal in development of at-risk species conservation assessments is to compile biological and ecological information that may assist conservation practitioners in making decisions regarding the conservation of species of interest. The Nebraska Natural Legacy Project recognizes the Topeka shiner (Notropis topeka) as a Tier I at-risk species of high priority for conservation. Some general management recommendations are made here regarding Topeka shiners; however, conservation practitioners will need to use professional judgment to make specific management decisions based on objectives, location, and a multitude of variables. This resource was designed to share available knowledge of the Topeka shiner that …

Multilocus And Parametric Analyses Of The Evolutionary History Of The Amazonian Peacock Cichlids, The Genus Cichla (Teleostei: Cichlidae), Stuart Willis

School of Biological Sciences: Dissertations, Theses, and Student Research

Accurate knowledge of species boundaries and species phylogeny are fundamental to testing hypotheses of recent evolutionary processes, but the estimation of these partitions is challenging due both to inherent confusion about what is being estimated as well as the data available to estimate them. Using multilocus data from mtDNA, microsatellites, and nuclear locus sequences of over 1100 individuals, we delimited eight separately evolving species of Cichla rather than the 15 described. Among species we found evidence of rare but widespread introgressive hybridization, while within these species we observed evidence of long-term gene exchange and constrained evolutionary trajectories. In most cases …

Communication For Mate Selection In Anurans: Dominant Frequency Versus Snout-Vent-Length, Shari Jean Kunert

Department of Environmental Studies: Undergraduate Student Theses

No abstract provided.

Thirty-Seven Additional Microsatellite Loci In The Pacific Lion-Paw Scallop (Nodipecten Subnodosus) And Cross-Amplification In Other Pectinids, Jessica Lynn Petersen, Ana M. Ibarra, Bernie May

Department of Animal Science: Faculty Publications

We characterized 37 new microsatellite markers in the Pacific lion-paw scallop (Nodipecten subnodosus) and tested for cross-amplification in four other species. Genetic diversity was estimated using 24 individuals from the Lagoon Ojo de Liebre, B.C.S., Mexico. Allelic richness varied from 5 to 27 alleles per locus and the average expected heterozygosity was 0.76. Ten loci exhibited significant departure from Hardy–Weinberg equilibrium likely due to the presence of null alleles. Sixteen of these markers cross-amplified in closely related N. nodosus, while little or no amplification was observed in three Argopecten species.

Ecology Of The Missouri River. Progress Report, Dingell-Johnson Project F-75-R-24, Supplement I - Missouri River Creel Survey, Camp Creek To Kansas State Line, 1 April Through 13 October 2006., Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 29 March through 10 October 2003. This is the fourth of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. Future reports will contain additional analyses of these data. Anglers spent over 30,000 hours fishing the Missouri River from Camp Creek (rk 883.5) to the Kansas state line (rk 790.2) during the survey period. Effort peaked during the …

Ecology Of The Missouri River: Missouri River Creel Survey, Bellevue Bridge To Camp Creek, 3 April Through 29 May 2004, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

The Nebraska Game and Parks Commission's strategic plan has stated the following management goal for the Missouri River: Restore, protect, and maintain the diversity of historic Missouri River habitats, resources, and ecosystem functions in order that present and future generations may enjoy consumptive and non-consumptive outdoor recreational opportunities (NGPC 1996). To accomplish this goal the Nebraska Game and Parks Commission identified the following five objectives: • To restore terrestrial and aquatic floodplain habitat types by 2008. This would include old oxbows, chutes, side channels, sand bars, backwaters, wetlands, and other shallow water habitats. To restore ftows that reflect the natural …

2002 Licensed Angler Survey: Summarized Results, Keith L. Hurley, Kristin L. Duppong-Hurley

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

On October 22, 2002, 5000 six-page surveys (Appendix 3) were sent to a stratified-random sample of Nebraska anglers drawn from the 2001 licensed anglers database. The database included all anglers who purchased a fishing license in 2001 as well as all lifetime fishing permit holders who purchased their license before or during 2001. The database did not include those possessing a free permit, such as veteran’s or senior citizen permits. The survey subsample (2.6% of the 2001-licensed angler database) was stratified such that the proportions of surveys in the subsample (4366 residents and 634 non-residents) matched the proportions of resident/non-resident …

Ecology Of The Missouri River. Progress Report, Dingell-Johnson Project F-75-R-23, Supplement I - Missouri River Creel Survey, Bellevue To Camp Creek, 2 April Through 14 October 2005, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 2 April through 14 October 2005. This is the sixth of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. We returned to the Bellevue to Camp Creek reach in 2005 because we had to cancel the creel on this reach in 2004 after the second creel period due to lack of personnel. Future reports will contain additional …

Ecology Of The Missouri River: Missouri River Creel Survey, Bellevue Bridge To Camp Creek, 30 March Through 11 October 2002. Supplement I, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 30 March through 11 October 2002. This is the third of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. Future reports will contain additional analyses of these data. Anglers spent over 42,000 hours fishing the Missouri River from Bellevue (rkm 967.7) to Camp Creek (rkm 883.5) during the survey period. Effort was steady from late spring (4/27 …

Ecology Of The Missouri River. Progress Report, Dingell-Johnson Project F-75-R-19, Supplement 1- Missouri River Creel Survey, Camp Creek To Kansas State Line, 31 March Through 12 October 2001, Gerald Mestl

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

This report describes Missouri River activities and results related to a channelized Missouri River creel survey conducted from 31 March through 12 October 2001. This is the second of a planned annual creel survey to be conducted on alternating sections of the channelized Missouri River to measure changes in recreational fishing activity, especially those changes due to large scale habitat restoration efforts. Future reports will contain additional analyses of these data. Anglers spent over 22,000 hours fishing the Missouri River from Camp Creek (rkm 883.5) to the Kansas state line (rkm 790.2) during the survey period. Effort peaked during the …

Nebraska And South Dakota 2000 Missouri River Recreational Use Survey: Supplement Ii, Nebraska And South Dakota 2000 Missouri River Recreational Use Survey, Fort Randall Tailwater To Big Sioux River, Gerald Mestl, Gerald Wickstrom, Clifton Stone

Nebraska Game and Parks Commission: White Papers, Conference Presentations, and Manuscripts

The 2000 Missouri River recreational use survey ran 1 April 2000 through 31 December 2000 and covered the Fort Randall Dam to Big Sioux River reach. Recreational user data was collected from postage paid post cards left on vehicles and through personal interviews. Pressure data was collected during a roving survey from ground counts of vehicles, boat trailers, recreational users. Aerial counts were made to compare angling and recreational boating data with ground count data. Recreational users spent an estimated 745,303 hours on the Missouri River survey reach during 2000. Fishing accounted for an estimated 458,749 hours, or 62% of …

Some Ecological Relations Of Fairy Shrimps In Alkaline Habitats Of Nebraska, D. B. Mccarraher

Nebraska Game and Parks Commission: Staff Research Publications

Ecological studies on the distribution of fairy shrimps have been made from 246 sites in the sandhills region of Nebraska. New records for Nebraska have been established for Artemia salina, Branchinecta campestris, B. lindahli, B. mackini and Cyzicus mexicanus. Seasonal populations of shrimp have been located in habitats containing permanent fish populations. Water mineralization was the dominant environmental condition related to the distribution of phyllopods with sodium and potassium compounds predominating in the strongly alkaline lakes. Several of the Artemia lakes were classified as hydroxide sites. Many of the alkaline ponds, where B. lindahli and B. campestris flourish, are …