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Genetics

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Environmental DNA

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Evaluating The Utility Of Tracers To Characterize Environmental Dna Transport And Inform Detection Of Fishes In Small Streams, Gavin B. Bandy Jan 2024

Evaluating The Utility Of Tracers To Characterize Environmental Dna Transport And Inform Detection Of Fishes In Small Streams, Gavin B. Bandy

Cal Poly Humboldt theses and projects

This study was motivated by the need to develop a noninvasive and highly sensitive monitoring tool for determining local occupancy of an endangered aquatic species To make inference into the occupancy of fishes within small stream sites, we developed a method to determine whether environmental DNA (eDNA) concentrations from a target species were elevated relative to a tracer, formulated to mimic eDNA and introduced at a single location. We examined patterns in the observed distribution of the tracer to account for the effects of site-specific transport processes and sampling on distributions of naturally occurring eDNA at small spatial scales (400 …