Life Sciences Commons^™

Arkansas Soybean Performance Tests 2010, R. D. Bond, D. G. Dombek, J. A. Still, R. M. Pryor

Arkansas Agricultural Experiment Station Research Series

Soybean variety and strain performance tests are conducted each year in Arkansas by the University of Arkansas Division of Agriculture Arkansas Crop Variety Improvement Program.

Efficient Separation And Sensitive Detection Of Listeria Monocytogenes Using Magnetic Nanoparticles, Microfluidics And Interdigitated Microelectrode Based Impedance Immunosensor, Damira Ashimkhanovna Kanayeva

Graduate Theses and Dissertations

Listeria monocytogenes continues to be a major foodborne pathogen that causes food poisoning and sometimes death in immunosuppressed people and abortion in pregnant women. Nanoparticles have recently drawn attentions for use in immunomagnetic separation techniques due to their greater surface area/volume ratio and better stability against sedimentation in the absence of a magnetic field. Interdigitated microelectrodes and microfluidics make material transfer more efficient and biological/chemical interaction between the surface and solution phase much quicker. Magnetic nanoparticles (Fe3O4) with a 30 nm diameter were functionalized with rabbit anti-L. monocytogenes antibodies via biotin-streptavidin bonds and then amalgamated with target bacterial cells …

Tryptophan Anchored Peptides In Lipid Bilayer Membranes: Control Of Peptide Orientation And The Phase Behavior Of Cholesterol-Containing Ternary Lipid Mixtures, Johanna Maria Rankenberg

Graduate Theses and Dissertations

Model WALP peptides and "next generation" WALP-derived hydrophobic model peptides were employed to discover principles that govern protein-lipid interactions in biological membranes.

Ternary cholesterol-containing lipid mixtures were examined in the presence of WALP peptides of different lengths (acetyl-GWW(LA)_nLWWA-ethanolamide, with n between 3 and 8). Deuterium NMR spectra from labeled lipids reveal that WALP peptides may stabilize lipid ordered "raft" domains and therefore promote lipid phase separation, albeit to a minor extent. The results depend upon whether dioleolyl- or diphytanoyl-phosphatidylcholine is present as the fluid lipid component.

Several WALP peptides were modified to remove anchoring Trp residues from one …

Applications Of Site-Specific Recombination Systems In Transgene Expression And Marker Gene Removal, Mehmet Aydin Akbudak

Graduate Theses and Dissertations

Site Specific Recombination systems, such as FLP-FRT and Cre-lox, have been successfully used for site-specific gene integration and marker-gene deletion in plant systems. They are very useful tools in the integration of single-copy full-length transgene cassettes into the genome because the transgene integration via conventional methods often generate multi-copy locus. Such complex locus containing direct and inverted repeats of full-length and truncated copies of the transgene cassette generate aberrant RNA resulting in gene silencing. Therefore, for stable gene expression, a single copy transgene locus is preferred. However, even single copy locus sometimes succumbs to gene silencing. Although the mechanism is …

Intraspecific Variation In Two Cosmopolitan Myxomycetes, Didymium Squamulosum And Didymium Difforme (Physarales: Didymiaceae), Katherine Elizabeth Winsett

Graduate Theses and Dissertations

The myxomycetes (plasmodial slime molds or myxogastrids) are one of three groups considered to be true slime molds (class Eumycetozoa sensu Olive 1975). Two vegetative states--amoebae and plasmodia--along with a spore-producing fruiting body characterize the life cycle of the myxomycetes. These organisms are associated with decaying plant material and are found in all terrestrial habitats worldwide. A number of species are considered cosmopolitan, being found worldwide, where they are associated with a diversity of microhabitats and substrates. A review of the literature, including molecular investigations in all three groups of slime molds, is presented, and this is followed by four …

Pharmacokinetic Evaluation Of The Blood: Tissue Relationship In Poultry: Screening For Antibiotic Residues In Chicken Muscle, Ixchel Reyes Herrera

Graduate Theses and Dissertations

During their life, humans are exposed to numerous substances that are naturally present in the environment or that are the result of man made processes, including heavy metals, persistent organic pollutants, pesticides and veterinary drugs. Some of these substances can leave residues in food products and possibly expose consumers to their potential toxic effects. To address these problems extensive regulatory efforts are devoted to prevent, detect and control these substances from reaching the food supply. However, given the vast diversity of food products that requires monitoring and the immense diversity of potential chemical contaminants, the need for an efficient and …

Arkansas Animal Science Department Report 2010, David L. Kreider

Arkansas Agricultural Experiment Station Research Series

No abstract provided.

Analysis Of The Response Of Medicago Truncatula Calcium Oxalate Mutants To Abiotic Stress, Wayra Gabriela Navia-Gine

Graduate Theses and Dissertations

Calcium oxalate crystals are found in most plant species. In Medicago truncatula wild-type A17, crystals accumulate in leaves along the secondary veins and the only role attributed to them so far is defense against chewing insects. Calcium oxalate deficient (cod) mutants were isolated in M. truncatula; the cod mutants include cod5, which completely lack crystals in the leaves and cod6 that accumulates fewer and smaller crystals compared to A17. We analyzed gene expression in the cod mutants and A17 using GeneChip® Medicago Genome Arrays and found important differences in transcriptome between the three genotypes. In particular, we found a gene …

Characterization Of Neuronal Groups Regulating Sexual And Agonistic Behavior In Male Chicken (Gallus Gallus), Jingjing Xie

Graduate Theses and Dissertations

The study aimed to understand the neuronal regulation of male sexual and agonistic behavior in broiler breeders. First, brain structures associated with sexual and agonistic behavior were identified by mapping Fos expression. The ventromedial subnucleus of medial portion of bed nucleus of the stria teriminalis (BSTM2) was specifically activated by male courtship behavior. The medial preoptic nucleus (POM) and lateral septum (SL) were associated with both sexual and agonistic behaviors. The bed nucleus of the pallial commissure (NCPa) and the paraventricular nucleus (PVN) were closely related to stress. Second, Fos-ir neurons were phenotyped by double labeling Fos with aromatase (ARO) …

Factors That Influence The Adoption Of Agricultural Conservation Programs In Northwest Arkansas, Edison Anthony Froelich

Graduate Theses and Dissertations

A survey was developed and administered to agricultural producers in Northwest Arkansas in order to better understand producer awareness of, application for and participation in six federal and state conservation programs available in Arkansas: the Environmental Quality Incentives Program, the Conservation Reserve Enhancement Program, the Arkansas Revolving Loan Program, the Arkansas Nonpoint Pollution Management Program , the Arkansas Soil Nutrient and Poultry Litter Application and Management Program, and the Surplus Poultry Litter Removal Incentives Cost Share Program. Survey results found that less than half of the sample was aware of any one of the programs. A logit model was developed …

Arkansas Corn And Grain Sorghum Performance Tests 2010, R. D. Bond, D. G. Dombek, J. A. Still, R. M. Pryor

Arkansas Agricultural Experiment Station Research Series

Corn and grain sorghum performance tests are conducted each year in Arkansas by the University of Arkansas Division of Agriculture. The tests provide information to companies marketing seed within the state and aid the Arkansas Cooperative Extension Service in formulating recommendations for producers.

Economic Contribution Of The Agricultural Sector To The Arkansas Economy In 2008, Jennie Popp, Nathan Kemper, Wayne Miller, Katherine Mcgraw, Kyle Karr

Research Reports and Research Bulletins

This report is the fifth in a series of reports examining agriculture’s economic contribution to the Arkansas economy. Utilizing data from the United States Bureau of Economic Analysis (BEA), USDA Economics Research Service (ERS), USDA National Agricultural Statistics Service (NASS), and Minnesota IMPLAN Group, Inc. (MIG), the economic contribution of agriculture on the Arkansas economy was estimated for the most recent year available, 2008. Gross Domestic Product (GDP) by State information for Arkansas was compared with those of other states in the southeast U.S. to give a measure of the relative importance of agriculture in Arkansas.2 The total economic contribution …

Arkansas Wheat Cultivar Performance Tests 2009-2010, J. T. Kelly, R. G. Miller, R. D. Bond, E. A. Milus, R. K. Bacon

Arkansas Agricultural Experiment Station Research Series

Wheat cultivar performance tests are conducted each year in Arkansas by the Arkansas Agricultural Experiment Station, Department of Crop, Soil and Environmental Sciences. The tests provide information to companies developing cultivars and/or marketing seed within the state and aid the Arkansas Cooperative Extension Service in formulating cultivar recommendations for small-grain producers.

Summaries Of Arkansas Cotton Research 2009, Derrick M. Oosterhuis

Arkansas Agricultural Experiment Station Research Series

No abstract provided.

B. R. Wells Rice Research Studies 2009, R. J. Norman, K. A. K. Moldenhauer

Arkansas Agricultural Experiment Station Research Series

No abstract provided.

Biogeography And Microhabitat Distribution Of Myxomycetes In High-Elevation Areas Of The Neotropics, Carlos Alonso Rojas-Alvarado

Graduate Theses and Dissertations

Myxomycetes are a group of amoeboid organisms with the capacity of forming fruiting bodies that resemble some macrofungi. The ecology and global distribution of species within the group have been studied only during the last half century. For this reason, a number of questions regarding the nature of the interactions that exist between myxomycetes and their environment still lack the empirical evidence required to obtain complete answers. In the Neotropical region, species assemblages have been moderately well studied, but their biogeography and macroecology have received little attention. In high-elevation areas of this region, the situation is especially precarious, due the …

Arkansas Turfgrass Report 2009, Douglas Karcher, Aaron Patton, Michael Richardson

Arkansas Agricultural Experiment Station Research Series

No abstract provided.

Wayne E. Sabbe Arkansas Soil Fertility Studies 2009, Nathan A. Slaton

Arkansas Agricultural Experiment Station Research Series

Rapid technological changes in crop management and production require that the research efforts also be presented in an expeditious manner. The contributions of soil fertility and fertilizers are major production factors in all Arkansas crops. The studies described within will allow producers to compare their practices with the university’s research efforts.

Arkansas Cotton Variety Test 2009, Fred M. Bourland, A. B. Beach, D. P. Roberts Jr.

Arkansas Agricultural Experiment Station Research Series

The primary goal of the Arkansas Cotton Variety Test is to provide unbiased data regarding the agronomic performance of cotton varieties and advanced breeding lines in the major cotton-growing areas of Arkansas. This information helps seed companies establish marketing strategies and assists producers in choosing varieties to plant.

Instructions For Authors, Discovery Editors

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

No abstract provided.

Marketing Options For Grapes And Grape Products, Pamela Brady, Michael Thomsen, Justin R. Morris

Research Reports and Research Bulletins

Many owners of small- and medium-size farms in Arkansas and across the U.S. have begun to explore the potential of juice and wine grapes as an alternative crop to increase the profitability and stability of their farming operations. Grapes are unique in that they are not only well-suited for marketing through traditional commercial channels but also are popular in direct marketing venues such as produce stands, farmers markets, community sponsored agricultural ventures, and pick-your-own operations. This publication provides an overview of the various types of market channels available for grape growers and explores their potential as outlets for regional grape …

Evaluation Of Fish And Macroinvertebrate Indices Of Biotic Integrity In The Bioassessment Of The Illinois River Basin, Rebekah Hotz

Inquiry: The University of Arkansas Undergraduate Research Journal

Evaluating performances of the fish and invertebrate Indices of Biotic Integrity (IBIs) for a region is important to maintain rigorous assessment of the environmental quality of streams, especially with increasing urbanization. Timing of the assessment is considered important, with the critical season (low flow, high temperature) preferred, but the primary season (spring– summer) may be as efficient. I assisted with the collection and analysis of fish and macroinvertebrates using methods developed by the United States Environmental Protection Agency’s (USEPA) Rapid Bioassessment Protocols (RBPs) and the Arkansas Department of Environmental Quality (ADEQ), along with obtaining habitat and chemical assessments during primary …

Industry Professionals’ Perceptions Of Crisis Communications Educational Needs For New Professionals And Best Practices For Second Life© Simulations, Kristin M. Pennington, Leslie D. Edgar

Discovery, The Student Journal of Dale Bumpers College of Agricultural, Food and Life Sciences

Crises impacting agriculture cost the nation billions of dollars in expenses and lost revenues annually. Organizations and governmental agencies continue to refocus energies on improving crisis communication plans in an effort to lessen economic impacts of unanticipated events. This study brought together an advisory team of agricultural communications professionals to gather perceptions of crisis communications educational needs for new professionals and to identify the best practices for using Second Life© (SL), a 3-D virtual world, simulations for training. Advisory team members represented the human, crop, animal, and environmental sectors of the agricultural industry. Perceptions were gathered during a roundtable, open-ended …

New Records And Notes On The Natural History Of Selected Invertebrates From Southern Arkansas, C. Renn Tumlison, Henry W. Robison

Journal of the Arkansas Academy of Science

No abstract provided.

Stand Conditions Immediately Following A Restoration Harvest In An Old-Growth Pine-Hardwood Remnant, Don C. Bragg

Journal of the Arkansas Academy of Science

Portions of the Levi Wilcoxon Demonstration Forest (LWDF), a privately owned parcel of old growth pine and hardwoods in Ashley County, Arkansas, were recently treated to restore conditions similar to some historic accounts of the virgin forest. Following a hardwood-only cut, a post-harvest inventory showed that the number of tree species in the sample area declined from 24 in 2006 (the most recent pre-harvest inventory) to 12 in 2009. Loblolly (Pinus taeda L.) and shortleaf (Pinus echinata Mill.) pine now comprise 59.2% of the remaining live trees, up from 16.2% in 2006. Between 2006 and 2009, basal area dropped from …

Cargo Of Birds To Arkansas, The Hurricanes In 2008 And The Swept Clean Hypothesis, Douglas A. James, Kimberly G. Smith, Joseph C. Neal, John G. Hehr

Journal of the Arkansas Academy of Science

Three hurricanes in the hurricane season of 2008 brought to Arkansas several unusual marine and other birds from southerly locations. There were 10 species noted, totaling 44 individual birds. Sooty Terns, numbering 15, were the most numerous. Laughing Gulls were next in abundance. In the mix of birds there was only 1 new species for the state, a Least Grebe. The hurricanes brought vastly different cargos of birds, and two hypotheses relating to how hurricanes transport birds are proposed. The findings supported the "swept clean" hypothesis over the "blown through" hypothesis.

Comparative Leaf Decomposition Rates Including A Non-Native Species In An Urban Ozark Stream, Sarah E. Lewis, Arthur V. Brown

Journal of the Arkansas Academy of Science

Leaf decomposition of three species of native Ozark vegetation was compared to that of one nonnative invasive species. Leaves were placed in an urban gravel-bed stream for 23 days. Changes in mass and condition of the leaves were assessed along with stream temperature, flow, width, depth and discharge. Species native to Eastern North American forests were sycamore (Platanus occidentalis), dogwood (Cornus florida), and redbud (Cercis canadensis). The nonnative species, Japanese (Amur) honeysuckle (Lonicera maackii) comprised approximately 80% of the understory vegetation within the riparian zone of the study reach. After 23 days, Sycamore lost 24.6% mass, dogwood lost 30%, redbud …

Distribution Of The Southeastern Shrew (Sorex Longirostris Longirostris) In Arkansas, G. A. Mikel, Gary A. Heidt, David W. Clark

Journal of the Arkansas Academy of Science

The southeastern shrew (Sorex longirostris longirostris) is considered uncommon and, due to a lack of knowledge, a Species of Greatest Conservation Need in Arkansas. Also, eastern Arkansas may represent a gap in the species’ distribution. Therefore, we evaluated persistence at previous capture sites, surveyed additional counties, quantified microhabitat at our capture locations, and compiled occurrences. Since Sealander and Heidt’s (1990) Arkansas Mammals detailed its occurrence, additional captures by Huston and Nelson (1994), Showen (2006), and this study document new counties (Pope and Searcy) and a new ecoregion (Arkansas Valley). Number of specimens in Arkansas has increased to 17 in 11 …

Population Status Of The Southern Cavefish, Typhlichthys Subterraneus In Arkansas, A. Romero, M. S. Connor, G. L. Vaughan

Journal of the Arkansas Academy of Science

We summarize the results of our study on the status of the southern cavefish (Typhlichthys subterraneus) in Arkansas. Its presence in the state represents the western-southern limits of its distribution. Four localities have been confirmed that contain individuals of this species: Richardson Cave (Fulton County), Alexander Cave/Clark Spring (Stone County), Ennis Cave (Stone County), and Lake Norfork (Baxter County). A fifth locality has been cited as a well in Randolph County, but because the exact location is unknown, its presence has not been confirmed. A number of unconfirmed localities for “cavefishes” in the region has not been included in this …

Status And Distribution Of The Gapped Ringed Crayfish, Orconectes Neglectus Chaenodactylus, In Arkansas, Brian K. Wagner, C. A. Taylor, Mark D. Kottmyer

Journal of the Arkansas Academy of Science

Orconectes neglectus chaenodactylus, the gapped ringed crayfish, is an uncommon and poorly-known, stream-dwelling crayfish that is endemic to the central White River basin of Arkansas and Missouri. This study surveyed a semi-random selection of stream sites in the Arkansas portion of this range in order to characterize the crayfish communities and evaluate the status of O. n. chaenodactylus in Arkansas. Collections of a total of 1,107 individual crayfish specimens were made at 45 sites, including 497 O. n. chaenodactylus from 21 sites. Orconectes punctimanus was the crayfish species most commonly associated with O. n. chaenodactylus, occurring at 71% of sites …