Life Sciences Commons^™

Mytrials: Clinical Trial Application Concept, Katie Hollister

Graphic Communication

A clinical trial’s success is dependent upon whether a patient attends their highly-structured clinical trial visit schedule, which may include both in-person clinic visits and virtual check-in visits. MyTrials is a clinical trial journey app prototype that enables patients to schedule, reschedule, and attend join their in-person or virtual clinic visits. This product seeks to reduce the burden that scheduling places on the patient, and provides trial-provided resources and a daily and weekly timeline to help patients navigate their clinical trial journey.

Associations Between Mothers’ Use Of Food To Soothe, Feeding Mode, And Infant Weight During Early Infancy, Megan K. Hupp, Peggy C. Papathakis, Suzanne Phelan, Alison K. Ventura

Kinesiology and Public Health

Weight status and rate of weight gain in the first six months postpartum are strong predictors of later obesity; thus, infant feeding practices are an important target for obesity prevention efforts. The use of food to soothe (FTS) is associated with less-favorable eating habits and weight outcomes for older infants and children. However, few studies have examined correlates of use of FTS during early infancy. The primary aim of this cross-sectional study was to explore associations between use of FTS and infant weight status in the first 6 months postpartum. A secondary aim was to identify the combination of maternal ...

Classifying Electrocardiogram With Machine Learning Techniques, Hillal Jarrar

Master's Theses

Classifying the electrocardiogram is of clinical importance because classification can be used to diagnose patients with cardiac arrhythmias. Many industries utilize machine learning techniques that consist of feature extraction methods followed by Naive- Bayesian classification in order to detect faults within machinery. Machine learning techniques that analyze vibrational machine data in a mechanical application may be used to analyze electrical data in a physiological application. Three of the most common feature extraction methods used to prepare machine vibration data for Naive-Bayesian classification are the Fourier transform, the Hilbert transform, and the Wavelet Packet transform. Each machine learning technique consists of ...

Climate Adaptation And Water Conservation Decision-Making In Paso Robles, California Vineyards, Christopher R. Klier

Master's Theses

This paper examines vineyard perceptions and adoption of climate change adaptation and water conservation measures in the Paso Robles American Viticultural Area (AVA). A survey was distributed to all 220 vineyards and vineyard management companies that operate in the AVA, with a 53.64% response rate. The objective of the survey was to determine vineyard manager and owner attitudes towards climate change and adaptation, as well as their perceptions of how these threats would impact their operation. A second objective was to document the current level of water conservation and climate adaptation while identifying the barriers and opportunities for further ...

Not So Dystopian: A Historical Reading Of Eugenics In Science Fiction, Riley Sanders

The Forum: Journal of History

Broadly, this paper is an effort in complicating traditional readings of eugenic themes in science fiction. Two landmark novels, Wells’ The Island of Dr. Moreau (1896) and Huxley’s Brave New World (1932), are highlighted as representative of the early and late stages of eugenics. By focusing on the troubling historical context surrounding these authors, I denounce the simple reading of these works as merely “dystopian”. Scholars like Francis Fukuyama advance these simplistic readings by instinctively assuming that Wells and Huxley were against eugenics. This paper continues the tradition that David Bradshaw popularized in his book The Hidden Huxley, which ...

Phytoplankton Community Response To Changing Environmental Conditions Across Two Central California Sites, Nicholas Soares

Biological Sciences

Understanding the role that changing environmental conditions play in altering phytoplankton abundance and community composition, and in turn ecosystem structure and function, will be increasingly important for the sustainable use and management of ocean resources in a changing climate. Characterizing change in nearshore ecosystems requires long-term studies with a broad spatial extent, with most studies sacrificing spatial extent for temporal duration. However, phytoplankton and ecosystem response can vary substantially over small spatial scales due to local oceanographic forcing and anthropogenic influence, making the application of long-term data from one site to another in the same geographic vicinity potentially challenging. In ...

Assessing Cryptic Dispersal And Movement In The Lompoc Kangaroo Rat, Katherine A. Belnick

Biological Sciences

Lompoc kangaroo rats (LKR, Dipodomys heermanni arenae) are small rodents that reside in sand dunes from Pismo to Orcutt, including the Oceano Dunes State Vehicular Recreation Area (SVRA), in Oceano, CA. In the SVRA, some of these individuals live in habitat islands, which are habitat fragments of dense vegetation disrupted by empty, bare sand in between them. Recreational vehicle activity is permitted in the Oceano Dunes, which has caused persistence habitat fragmentation. Kangaroo rats are known to disperse between habitat islands and are suspected to do so via a special type of dispersal: cryptic dispersal. This dispersal mode, if it ...

Will Oakland Burn Again: Understanding The Fire Hazard In An Urban Park System, Alessandra M. Zambrano

Master's Theses

Though almost thirty years have passed since the 1991 Tunnel Fire, the wildfire hazard is still present in the Oakland Hills. This study was conducted to determine if the vegetation in the Oakland Hills had reverted back to fuel conditions that contributed to the Tunnel Fire, examine how the fire hazard has changed since 1991, and evaluate planned wildfire mitigation. The goal was to determine how fuel conditions have changed since 1991 and compare potential fire behavior to that of the Tunnel Fire. Additionally, the study examined the effectiveness of the mitigation actions described in the East Bay Regional Park ...

Rapid Warming Events In A Small Coastal Upwelling Embayment, Tatjana E. Ellis

Physics

Temperature variability in the nearshore coastal ocean influences various biological processes and can drive changes in biodiversity and habitat range. Despite recent progress, there are still significant gaps in the understanding of drivers of temperature variability in upwelling bays, particularly at higher frequencies. In this study, we analyzed a decade of nearshore temperature measurements both inside and outside a small coastal embayment located in central California [San Luis Obispo (SLO) bay], as well as temperature data from satellites, to characterize rapid warming events. We found that rapid warming events, defined using rates of temperature change across different thresholds, occurred more ...

Effects Of Plant Growth-Promoting Bacteria And Fungi On Strawberry Plant Health, Fruit Yield, And Disease Susceptibility, Mary Maher

Master's Theses

Studies on plant growth-promoting rhizobacteria (PGPR) and fungi (PGPF) as biostimulants have shown significant positive effects on plant health, fruit yield, or pest management. However, very few published studies to date have been specific regarding their effects on strawberries (Fragaria × ananassa), particularly on soilborne disease prevalence in organically grown strawberries. Empirical data on the results of using these products in commercial growing applications under various conditions would be highly valuable, especially for organic growers who have limited synthetic chemical pesticides, herbicides and fertilizers registered for use. The objective of this study is to evaluate the efficacy of biostimulant supplementation on ...

Development Of A Portable Low-Moisture Food Pasteurization Device Using Rf Heating, Eric Jason Ohata

Master's Theses

Bacterial presence in low-moisture foods such as flour, cereals, baby formula, and spices, have become a concern due to sanitizing challenges. The food industry currently focuses on wet food sanitation as opposed to low-moisture foods because of bacteria’s inability to reproduce in low water activity media. Traditionally, food processing RF heating pasteurizes in mass quantities while an equivalent consumer device does not exist the market today. A consumer product would help eliminate food waste by providing an easy way to sanitize food and extend shelf life. The Portable Food Pasteurization (PFP) project is an interdisciplinary project involving the Electrical ...

Habitat Heterogeneity Affects The Thermal Ecology Of The Federally Endangered Blunt-Nosed Leopard Lizard, Nicole Gaudenti

Master's Theses

Global climate change is already contributing to the extirpation of numerous species worldwide, and sensitive species will continue to face challenges associated with rising temperatures throughout this century and beyond. It is especially important to evaluate the thermal ecology of endangered ectotherm species now so that mitigation measures can be taken as early as possible. A recent study of the thermal ecology of the federally endangered Blunt-Nosed Leopard Lizard (Gambelia sila) suggested that they face major activity restrictions due to thermal constraints in their desert habitat, but that large shade-providing shrubs act as thermal buffers to allow them to maintain ...

Mother–Infant Interactions And Infant Intake During Breastfeeding Versus Bottle-Feeding Expressed Breast Milk, Alison K. Ventura, Megan Hupp, Joseph Lavond

Kinesiology and Public Health

Bottle-fed infants are at higher risk for rapid weight gain compared with breastfed infants. Few studies have attempted to disentangle effects of feeding mode, milk composition and relevant covariates on feeding interactions and outcomes. The objective of the present study was to compare effects of breastfeeding directly at the breast versus bottle-feeding expressed breast milk on feeding interactions. Mothers with <6-month-old infants (n = 47) participated in two counterbalanced, feeding observations. Mothers breastfed their infants directly from the breast during one visit (breast condition) and bottle-fed their infants expressed breast milk during the other (bottle condition). Masked raters later coded videos using the Nursing Child Assessment Parent–Child Interaction Feeding Scale. Infant intake was assessed. Mothers self-reported sociodemographic characteristics, infant feeding patterns (i.e. percentage of daily feedings from bottles) and level of pressuring feeding style. Mother and infant behaviours were similar during breast and bottle conditions. Percent bottle-feeding moderated effects of condition on intake (P = 0.032): greater percent bottle-feeding predicted greater intake during the bottle compared with breast condition. Effects of feeding mode were not moderated by parity or pressuring feeding style, but, regardless of condition, multiparous mothers fed their infants more than primiparous mothers (P = 0.028), and pressuring feeding style was positively associated with infant intake (P = 0.045). Findings from the present study do not support the hypothesis that feeding mode directly impacts dyadic interaction for predominantly breastfeeding mothers and infants, but rather suggest between-subject differences in feeding experiences and styles predict feeding outcomes for this population.

Occupancy Modeling Of Western Monarch Thanksgiving Counts: Negative Impacts Of Incomplete Resurveys And Uneven Sampling Efforts, Keegan M. Mclean

Biological Sciences

Western monarch butterflies (sp. Danaus plexippus) are undergoing a severe decline that rivals those occurring among insects across the globe. Despite the estimation of population abundance, growth rates, and extinction probabilities, no analyses have investigated spatiotemporal patterns of decline in the western monarch population. I performed occupancy modeling of Western Monarch Thanksgiving Count (WMTC) data. The data was constrained spatially and temporally, with sites grouped into occupancy bins by latitude and year. Occupancy probabilities (psi) were estimated for each intersection of a latitude and time bin and detection probabilities (p) were estimated for each time bin. Psi increased slightly and ...

Lotus: A Web-Based Computational Tool For The Preliminary Investigation Of A Novel Mst Method Utilizing A Library Of 16s Rrna Bacteroides Otus, Ginger Dewitte

Master's Theses

Microbial Source Tracking (MST) is a field of study that attempts to identify the source of fecal contamination in waterways in order to assist with development of remediation strategies. Biologists at Cal Poly Center for Applications in Biotechnology (CAB) are developing a new MST method using microbes from the genus Bacteroides. Bacteroides species are host-specific microorganisms that can theoretically be used to trace back to a single host species. After fecal samples are collected, biologists use Next-Generation Sequencing (NGS) techniques to obtain only the genetic sequences of microorganisms belonging to the phylum Bacteroidetes. Investigators hypothesize that similar sequences belong to ...

Associations Between Maternal Technology Use, Perceptions Of Infant Temperament, And Indicators Of Mother-To-Infant Attachment Quality, Shawnee Alvarez Guitierrez, Alison K. Ventura

Kinesiology and Public Health

Background: Previous research suggests parents' use of technological devices, such as TV and mobile devices, within family contexts may decrease the quality of parent-child interactions. During early infancy, mothers report engaging with technological devices during infant feeding and care interactions, however, few studies have explored potential associations between maternal technology use and the quality of mother-to-infant attachment.

Aim: To examine associations between maternal technology use during mother-infant interactions and indicators of mother-to-infant attachment during early infancy.

Study design: Cross-sectional survey.

Methods: Mothers (n = 332) of infants aged 2 to 6 months were recruited via MTurk, a crowdsourcing platform, to participate ...

Early Wildfire Detection With Line Sensors, Virginia Yan

Master's Theses

Over the last few years, wildfires have become more devastating to communities as the fires are inevitably destructive to many homes, businesses, and ecosystems. Frequent wildfires also pose a significant threat to power grids and nearby residents as they can damage transmission lines and other electrical equipment, which in turn can cause major power shutdowns. Especially in western U.S., severe drought conditions and weather variability cause residents to become more vulnerable to wildfire disasters as their safety is threatened. We are incompetent to control the wildfires effectively despite existing advanced technologies. Hence, an algorithm based on energy conservation and ...

Natural And Experimental Noise Affects Acoustic Communication In Songbirds, Veronica Arlene Reed

Master's Theses

Background noise is ubiquitous and can impair acoustic communication and influence signaling behavior in animals. Despite evidence demonstrating myriad effects of anthropogenic noise on animal communication, precisely how natural background noise influences communication and behavior remains unclear. Yet, natural sources of background noise, such as rushing rivers or crashing ocean surf, share similar power spectra to sources of anthropogenic noise and can occur at high amplitudes, potentially masking acoustic signals.

To investigate the effects of water-generated noise on songbird behavior, we experimentally broadcast landscape-level playbacks of ocean surf and river noise in coastal California, USA, and riparian habitat in Idaho ...

The Effects Of Wort Oxygenation Scenarios On Fermentation Performance, Volatile Flavor Compound Development, And Flavor Stability In High Gravity Brewing, Ben Jabson

Master's Theses

High gravity (HG) brewing has become the most used strategy for maximizing fermenter productivity in commercial brewing. While HG brewing has many benefits, the additional stress placed on the yeast due to the higher concentration of fermentable sugars in the wort can negatively impact fermentation performance and flavor compound formation. A proper dissolved oxygen (DO) level is vital to guarantee adequate yeast performance during HG fermentations. Dissolved oxygen is vital to yeast viability throughout the fermentation process, as yeast requires oxygen to synthesize vital cell membrane components needed for continued anaerobic growth and cell division. Previous research has demonstrated the ...

Seasonal Controls On Nearshore Hypoxia In A Small Coastal Embayment, Stephen Alexander Huie

Physics

Dissolved oxygen (DO) is an important biogeochemical factor that strongly influences nearshore coastal ecosystems. Low DO (hypoxic) events can cause physiological stressful environments for ecological and economically important species, potentially leading to mass mortalities. In order to better assess drivers of coastal hypoxia, we collected data from monthly cruises on the inner shelf and nearshore moorings inside and outside a small coastal embayment (San Luis Obispo Bay on the Central California Coast) across the full upwelling season (March to August). During the late spring and early summer, we found that the nearshore near-bottom temperature-DO (T-DO) relationship aligned with the shelf ...

Effect Of Prenatal Lifestyle Intervention On Maternal Postpartum Weight Retention And Child Body Massindex Z-Score At 36 Months, Suzanne Phelan, Chantelle N. Hart, Elissa Jelalian, Karen Muñoz-Christian, Noemi Alarcon, Angelica Mchugh, Alison K. Ventura, Rena R. Wing

Kinesiology and Public Health

Background/Objectives We previously reported results from a randomized trial showing that a behavioral intervention during pregnancy reduced excess gestational weight gain but did not impact maternal weight at 12 months. We now examine the longer-term effects of this prenatal intervention on maternal postpartum weight retention and toddler body-mass-index z scores (BMIz) over 36 months.

Subjects/Methods Pregnant women (N = 264; 13.7 weeks’ gestation; 41.6% Hispanic) with overweight or obesity were randomized into usual care or prenatal intervention. Anthropometric assessments in mothers and toddlers occurred at baseline, 35 weeks’ gestation and after delivery at 6, 12, 18, 24 ...

The Future Of Organic Insect Pest Management: Be A Better Entomologist Or Pay For Someone Who Is, David H. Headrick

Horticulture and Crop Science

Insect pest management in certified organic production systems presents considerable challenges for growers. The Federal National Organic Program (NOP) guidelines list acceptable tactics, but their effective use requires a considerable knowledgebase in entomology. The range of tactics allowed by the NOP are viewed as limiting by many growers and there are important elements missing from the list such as pest monitoring and identification. Educational programs must consider utilizing instructional methods and additional means of outreach that introduce new pest management tactics that are individualized, regionally appropriate and emphasize grower adoption and collaboration with local professionals. This review describes the challenges ...

Comparative Effects Of Chemical And Physical Sunscreen On Fertilization Of Purple Sea Urchins (Strongylocentrotus Purpuratus), Marilla Lippert, Maurice Codespoti Goodman, Nikki Adams

Biological Sciences

Organic compound-based “chemical” sunscreens dominate the commercial sunscreen market, but recent research has revealed the ingredients of these products are detrimental to the health of marine organisms. This revelation has led to increased popularity of mineral-based “physical” sunscreens, primarily containing zinc-oxide (ZnO), as environmentally safe alternatives. While they are marketed as environmentally safe, these claims are largely untested, and it is important to consider potential effects of ZnO-based sunscreens on the development of marine organisms. Though Zn is a necessary micronutrient in the ocean, excess Zn is released into marine environments from anthropogenic sources has negative effects on marine life ...

Suspicion Encoded: Women Of Color And Biometric Technology In The United States, Lilith A. Saylor

sprinkle: an undergraduate journal of feminist and queer studies

This paper explores the commodification of privacy through biometric technology in the United States. It examines the impact of this technology on poor women of color (WOC), arguing that poor WOC face intersectional discrimination based on the convergence of sex, race, and class in their identities. I highlight the unique and powerful intrusion of biometric technology into the lives of poor WOC, and argue that the connection between data and the physical body created through biometric data has formed an environment in which the state wields unrestricted control in all spheres over the privacy of poor WOC.

Eelgrass (Zostera Marina) Population Decline In Morro Bay, Ca: A Meta-Analysis Of Herbicide Application In San Luis Obispo County And Morro Bay Watershed, Tyler King Sinnott

Master's Theses

The endemic eelgrass (Zostera marina) community of Morro Bay Estuary, located on the central coast of California, has experienced an estimated decline of 95% in occupied area (reduction of 344 acres to 20 acres) from 2008 to 2017 for reasons that are not yet definitively clear. One possible driver of degradation that has yet to be investigated is the role of herbicides from agricultural fields in the watershed that feeds into the estuary. Thus, the primary research goal of this project was to better understand temporal and spatial trends of herbicide use within the context of San Luis Obispo (SLO ...

Study Of Plants Used Against Infections By California Native American Tribes, Maria J. Rojas

Master's Theses

The objectives of this research were to evaluate the antibacterial activity and to determine the chemical composition of a list of medicinal plants used by Native Americans in California. Artemisia californica, Mimulus aurantiacus, Equisetum telmateia, Equisetum hyemale, and Marah fabacea were selected from a list of plants reported as having been used for ailments related to infections by tribes located in California. The extracts obtained through steam distillation from E. telmateia, E. hyemale and M. fabacea were assayed for in vitro antibacterial activity against 16 Gram-negative and 6 Gram-positive bacteria using disk diffusion assays and measuring the diameters of inhibition ...

Potential Overfeeding Among Formula Fed Special Supplemental Nutrition Program For Women, Infants And Children Participants And Associated Factors, Christopher E. Anderson, Catherine E. Martinez, Alison K. Ventura, Shannon E. Whaley

Kinesiology and Public Health

Background: The Special Supplemental Nutrition Program for Women, Infants and Children (WIC) provides enough formula to meet the known nutritional needs of infants up to 6 months of age whose mothers report not breastfeeding, but many mothers report WIC providing insufficient formula, indicating potential overfeeding.

Objective: To estimate the prevalence of potential overfeeding among formula-feeding WIC participants and identify associated factors.

Methods: Potential overfeeding was identified among participants of the longitudinal Infant and Toddler Feeding Practices Study-2 (ITFPS-2) receiving the fully formula feeding WIC infant package at 1 month of age (n = 1235, weighted n = 197 079). Associations of potential ...

Positive Parenting Approaches And Their Association With Child Eating And Weight: A Narrative Review From Infancy To Adolescence, Katherine N. Balantekin, Stephanie Anzman-Frasca, Lori A. Francis, Alison K. Ventura, Jennifer O. Fisher, Susan L. Johnson

Kinesiology and Public Health

Parents play a critical role in the development of children's eating behaviours and weight status, serving as providers, models and regulators of the food environment. Many research reviews have focused on the robust body of evidence on coercive control in feeding: how parenting practices such as restriction and pressure to eat increase children's risk for developing undesirable eating behaviours and unhealthy weight outcomes. Fewer reviews adopt a strengths-based perspective focusing on the ways that parents can actively support the development of healthy eating behaviours and weight trajectories. Emerging research on such positive parenting styles and practices offers solutions ...

A Naturalistic Ethic Supporting A Vegan Diet, Michael Morris

Between the Species

Nutritional evidence suggests that a vegan diet is the most adaptive one for humans. An ethical principle based on following our biological nature (naturalistic ethic) could therefore provide additional support for a vegan diet. However, some argue that humans in the natural world could not eat a vegan diet, since it relies on supplements, particularly vitamin B12. This leads to the conclusion that humans are naturally omnivores, and therefore our natural diet should include small amounts of animal products.

Three approaches to this conclusion are discussed. The first rejects a naturalistic ethic in favour of normative principles based on animal ...

Pressure Driven Desalination Utilizing Nanomaterials, Fangyou Xie

Master's Theses

Nanomaterials such as graphene oxide and carbon nanotubes, have demonstrated excellent properties for membrane desalination, including decrease of maintenance, increase of flux rate, simple solution casting, and impressive chemical inertness. Here, two projects are studied to investigate nanocarbon based membrane desalination. The first project is to prepare hybrid membranes with amyloid fibrils intercalated with graphene oxide sheets. The addition of protein amyloid fibrils expands the interlayer spacing between graphene oxide nanosheets and introduces additional functional groups in the diffusion pathways, resulting in increase of flux rate and rejection rate for the organic dyes. Amyloid fibrils also provide structural assistance to ...