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Full-Text Articles in Life Sciences

Nitrogen Isotopes In Deep Sea Corals; A Potential Tracer Of Paleoceanographic Conditions, Sylvia Bergerud Jan 2023

Nitrogen Isotopes In Deep Sea Corals; A Potential Tracer Of Paleoceanographic Conditions, Sylvia Bergerud

Scripps Senior Theses

Abstract

In the face of anthropogenic climate change, increasing pressure is being mounted on contextualizing current climate altercations compared to those of the past. One key tracer of climate variation is the isotopic ratio of 15N compared to 14N, which tracks biological and chemical reactions throughout the N cycle. However, it is difficult to find accurate palaeoceanographic records of N isotope fractionation, as most sedimentary and organic samples are subject to extensive diagenesis, degradation, and erosive processes. Scleractinian corals present a potential solution to this lack of accurate data. Multiple studies indicate that, due to their protective aragonite skeletons and …


The Impact Of Tidal Elevation And Climate Change On The Growth And Performance Of Balanus Glandula, Sam Martin Jan 2021

The Impact Of Tidal Elevation And Climate Change On The Growth And Performance Of Balanus Glandula, Sam Martin

Pitzer Senior Theses

Tidal elevation affects the survival, growth, and performance of intertidal organisms because it regulates their exposure to heat, waves, food availability, and a variety of other abiotic factors. While previous research has explored the relationship between temperature and the performance of the barnacle Balanus glandula, there are unanswered questions about how tidal elevation affects B. glandula performance and growth. I compared the growth of B. glandula at three tidal elevations in Friday Harbor, Washington, and estimated the metabolic cost of emersion at each tidal elevation using a cost equation gained from thermal performance curves and average daily maximum temperatures. …


Heat Stress During Larval Stages On Coral Survivorship For M. Capitata, Sarah Woo Jan 2021

Heat Stress During Larval Stages On Coral Survivorship For M. Capitata, Sarah Woo

Pitzer Senior Theses

Very little is known about how heat stress during larvae stages effect larvae survivorship, early coral recruit settlement, and later stage coral survivorship. We focused on determining how heat stress during larvae stages effected Montipora capitata survivorship over time. After thermally stressing larvae, we asked how many larvae survived the treatment, how the treatment affected settlement, how many larvae survived the heat treatment but did not settle, and later stage coral survivorship experienced residual effects from the heat stress treatment. We exposed coral larvae to ambient seawater temperatures at 30°C and heated seawater temperatures to 34°C for an hour and …


Assessing The Significance Of Substrate Color And Temperature On Balanus Glandula Growth And Survivorship, Nhi Phan Jan 2021

Assessing The Significance Of Substrate Color And Temperature On Balanus Glandula Growth And Survivorship, Nhi Phan

CMC Senior Theses

The body temperatures of intertidal species are strongly dependent on the temperature of their external environment. This study sought to understand the impact of a substrate’s color and subsequent temperature on Balanus glandula in order to predict the potential effects of warming temperatures from climate change on intertidal species. Barnacles were allowed to settle and grow on three differently colored plates and were photographically monitored over the course of eleven weeks. Settlement and survivorship were recorded on-site, while growth was tracked utilizing digital imaging software. It was hypothesized that barnacles on peach plates would perform the best since the ambient …


Evolution Of Island, Dominique Kongsli Dec 2020

Evolution Of Island, Dominique Kongsli

The STEAM Journal

Evolution of Island emerged from the depths of an ocean of blue paint. My process involves observation of nature: I remember scuba diving in Thailand in the Andaman Sea and having a spiritual experience underwater while observing Christmas-tree worms pop in and out of the coral.


The Chumash Heritage National Marine Sanctuary: An Exploration Of Changing The Discourse On Conservation, Arielle Ben-Hur Jan 2020

The Chumash Heritage National Marine Sanctuary: An Exploration Of Changing The Discourse On Conservation, Arielle Ben-Hur

Pitzer Senior Theses

In 2015, the Northern Chumash Tribal Council submitted a National Marine Sanctuary Nomination to establish the Chumash Heritage National Marine Sanctuary– a means by which to ensure the protection of one of the most culturally and biologically diverse coastlines in the world. On October 5, 2015, John Armor of the National Oceanic and Atmospheric Administration (NOAA) responded to the nomination, adding it to the inventory of areas NOAA may consider in the future for national marine sanctuary designation.

In my thesis, I explore how the nomination of the Chumash Heritage National Marine Sanctuary acts as a platform from which Traditional …


Krill Watching, Michael J. Leach Dec 2019

Krill Watching, Michael J. Leach

The STEAM Journal

This is a concrete, or visual, found poem about the scientific activity of observing krill in the deep sea. I discovered this concrete found poem in prose that Nicol (2019, p. 200) quoted from Ommanney (1938).

  • Nicol, S 2019 ‘Oceans of krill’, in B Nogrady (ed) The best Australian science writing 2019, Sydney: NewSouth Publishing.
  • Ommanney, FD 1938 South latitude, London: Longmans, Green & Co.


Changing Oceanic Conditions On The Foraging Patterns Of Cassin’S Auklets, Ptychoramphus Aleuticuschanging Oceanic Conditions On The Foraging Patterns Of Cassin’S Auklets, Ptychoramphus Aleuticus, Clare Flynn Jan 2019

Changing Oceanic Conditions On The Foraging Patterns Of Cassin’S Auklets, Ptychoramphus Aleuticuschanging Oceanic Conditions On The Foraging Patterns Of Cassin’S Auklets, Ptychoramphus Aleuticus, Clare Flynn

Pomona Senior Theses

Cassin’s auklet (Ptychoramphus aleuticus) reproductive success has been monitored on Southeast Farallon Island (SEFI) for the past 45 years. Their productivity has varied with oceanic conditions. The purpose of this study is to connect how oceanic conditions affect Cassin’s auklet foraging behaviors. The California Current System (CCS) can normally maintain high plankton productivity, and thus high seabird productivity, because of coastal upwelling. I hypothesized that lower upwelling and/or higher sea surface temperatures (SSTs) lead Cassin’s auklets to spend more time on intensive foraging behaviors such as flying and diving, and have less time to spend resting. I also hypothesized that …


In The Eye Of The Storm: Houston After Hurricane Harvey, Brandon Tolentino-Serrano Jan 2019

In The Eye Of The Storm: Houston After Hurricane Harvey, Brandon Tolentino-Serrano

Pomona Senior Theses

Situated in one of the wettest climates in America, Houston, TX has had a long history of heavy rains and unprecedented floods. Unfortunately, floods have become more common over the last few decades as climate change increases the frequency and intensity of hurricanes around the globe. To complicate matters further, Houston has quickly sprawled to accommodate over 2.5 billion people. Rapid urbanization has rendered the landscape even more susceptible to floods through excess concretization and watershed disturbance. This thesis traces the history of the Bayou City in relation to the damages caused by Hurricane Harvey. By mapping out the original …


Island Invasion: The Silent Crisis In Hawaii, Sophia Janssen Jan 2019

Island Invasion: The Silent Crisis In Hawaii, Sophia Janssen

Pomona Senior Theses

Keeping out invasive species may, upon first review, seem like a trivial environmental cry from ecologists and deep environmentalists; a belated wish to return to an undeveloped world where nature was pristine. However invasive species create problems that impact all of us and can have far more severe consequences than changing a stunning landscape. These problems are heightened in islands like Hawaii, where the fragile ecosystems have developed over centuries of evolution and adaptation. The introduction of a disease-carrying mosquito can put the people of Hawaii at risk to many vector-born illnesses and create an epidemic, taking human life. The …


Role Of Managed Marine Areas On The Diversity And Individual Responses Of Rocky Intertidal Shore Grazers In Central Chile, Kathy Liu Jan 2019

Role Of Managed Marine Areas On The Diversity And Individual Responses Of Rocky Intertidal Shore Grazers In Central Chile, Kathy Liu

Scripps Senior Theses

Many different types of marine benthic herbivores or “grazers” inhabit coastal intertidal zones and play a crucial role in inter- and shallow subtidal ecosystems. Chile has one of the most diverse intertidal zones, but many intertidal grazers are exploited for human consumption. Marine protected areas (MPAs) and marine management and exploitation areas (MEAs) are promising tools for Chile to combat over exploitation of these grazer and other marine resources. This study surveyed the impact of sites with contrasting management on the diversity and abundance of all intertidal grazers and their impact on the size frequency and shell length-body weight allometry …


An Examination Of El Niño's And Agricultural Runoff's Effect On Harmful Algal Blooms And California Sea Lion (Zalophus Californianus) Health In Monterey Bay, Nadine Lafeber Jan 2015

An Examination Of El Niño's And Agricultural Runoff's Effect On Harmful Algal Blooms And California Sea Lion (Zalophus Californianus) Health In Monterey Bay, Nadine Lafeber

Scripps Senior Theses

An increase in marine mammal stranding and die-off events has been observed along the California coast. The exact cause to explain for these recent events is unknown, but El Niño and harmful algal blooms are established sources for temporary decreases in marine mammal health. To determine whether El Niño could be causing and amplifying harmful algal blooms, particularly in Monterey Bay where they occur frequently, data was analyzed from the Marine Mammal Center in Sausalito, California. Data analysis focused on California sea lions (Zalophus californianus), because they have the largest data set and are directly affected by harmful …


Stem Art Learning Outcomes, Emily Gottlieb Feb 2014

Stem Art Learning Outcomes, Emily Gottlieb

The STEAM Journal

No abstract provided.


A Revision Of The Octocoral Genus Ovabunda Alderslade, 2001 (Anthozoa, Octocorallia, Xeniidae), Catherine S. Mcfadden, Yehuda Benayahu, Anna Halász, Dafna Aharonovich, Robert Toonen Jan 2014

A Revision Of The Octocoral Genus Ovabunda Alderslade, 2001 (Anthozoa, Octocorallia, Xeniidae), Catherine S. Mcfadden, Yehuda Benayahu, Anna Halász, Dafna Aharonovich, Robert Toonen

All HMC Faculty Publications and Research

The family Xeniidae (Octocorallia) constitutes an abundant benthic component on many Indo-West Pacific coral reefs and is ecologically important in the Red Sea. The genus Ovabunda Alderslade, 2001 was recently established to accommodate previous Xenia species with sclerites comprised of a mass of minute corpuscle-shaped microscleres. The aim of the present study was to examine type material of Xenia species in order to verify their generic affiliation. We present here a comprehensive account of the genus Ovabunda, using scanning electron microscopy to depict sclerite microstructure. We assign three Xenia species to the genus: O. ainex comb. n., O. …


A New Species Of Ovabunda (Octocorallia, Xeniidae) From The Andaman Sea, Thailand With Notes On The Biogeography Of This Genus, Catherine S. Mcfadden, Michael P. Janes, Thanongsak Chanmethakul Jan 2014

A New Species Of Ovabunda (Octocorallia, Xeniidae) From The Andaman Sea, Thailand With Notes On The Biogeography Of This Genus, Catherine S. Mcfadden, Michael P. Janes, Thanongsak Chanmethakul

All HMC Faculty Publications and Research

A survey of xeniid octocorals was carried out in the waters off Southwestern Thailand in September, 2007. Microscopic investigation of the colonies revealed that three specimens belonged to the genus Ovabunda. Gross morphological examination is presented here accompanied by scanning electron micrographs of the sclerites. Molecular phylogenetic analysis showed identical genotypes at mtMutS, COI, and 28S rDNA for all three specimens and supports their generic assignment. Colony size and shape, sclerite size, and pinnule arrangement differ from nominal species of Ovabunda and thus a new species, O. andamanensis is introduced here. This work also presents a new …


The Impact Of Sea Surface Temperature On Outbreaks Of Acanthaster Planci On The Great Barrier Reef, Laura A. Grossman Jan 2014

The Impact Of Sea Surface Temperature On Outbreaks Of Acanthaster Planci On The Great Barrier Reef, Laura A. Grossman

Scripps Senior Theses

The causes of increasing outbreaks of Acanthaster planci on the Great Barrier Reef have been a point of hot debate in recent years. It is unknown whether the increased success is due to nutrient runoff, salinity levels, or a decrease in predation, among other possibilities. In this paper I argue that the primary influence on outbreak status is sea surface temperature. From existing literature, I demonstrate that sea surface temperature in the Great Barrier Reef has increased by 0.4°C per year over the past three decades. I attempt to tie this increase with an increase in frequency of A. planci …


Family Matters: An Analysis Of Genetic Relatedness Of Tetraclita Rubescens (The Pink Volcano Barnacle) Over Several Spatial Scales At Monterey And Bodega Bay, California, Kelly N. Chang Jan 2013

Family Matters: An Analysis Of Genetic Relatedness Of Tetraclita Rubescens (The Pink Volcano Barnacle) Over Several Spatial Scales At Monterey And Bodega Bay, California, Kelly N. Chang

Scripps Senior Theses

Inbreeding involves the mating of closely related individuals at a higher frequency than at random; this can decrease the average fitness of populations and individuals by reducing the presence of heterozygotes and augmenting the expression of deleterious genes. Since marine invertebrates exhibit widespread dispersal, their potential for inbreeding is often disregarded. The adult sessile state of barnacles creates the potential for inbreeding as a result of necessary copulation between neighboring individuals. Depending on the degree of mixing that occurs during dispersal, closely related individuals or siblings may settle in close proximity, generating the possibility of kin aggregation and consequent inbreeding. …


Deep-Sea Origin And In-Situ Diversification Of Chrysogorgiid Octocorals, Catherine S. Mcfadden, Eric Pante, Scott C. France, Arnaud Couloux, Corinne Cruaud, Sarah Samadi, Les Watling Jan 2012

Deep-Sea Origin And In-Situ Diversification Of Chrysogorgiid Octocorals, Catherine S. Mcfadden, Eric Pante, Scott C. France, Arnaud Couloux, Corinne Cruaud, Sarah Samadi, Les Watling

All HMC Faculty Publications and Research

The diversity, ubiquity and prevalence in deep waters of the octocoral family Chrysogorgiidae Verrill, 1883 make it noteworthy as a model system to study radiation and diversification in the deep sea. Here we provide the first comprehensive phylogenetic analysis of the Chrysogorgiidae, and compare phylogeny and depth distribution. Phylogenetic relationships among 10 of 14 currently-described Chrysogorgiidae genera were inferred based on mitochondrial (mtMutS, cox1) and nuclear (18S) markers. Bathymetric distribution was estimated from multiple sources, including museum records, a literature review, and our own sampling records (985 stations, 2345 specimens). Genetic analyses suggest that the Chrysogorgiidae as currently described is …


The Phylum Cnidaria: A Review Of Phylogenetic Patterns And Diversity 300 Years After Linnaeus, Catherine S. Mcfadden, Marymegan Daly, Mercer R. Brugler, Paulyn Cartwright, Allen G. Collins, Michael N. Dawson, Daphne G. Fautin, Scott C. France, Dennis M. Opresko, Estefania Rodriguez, Sandra L. Romano, Joel L. Stake Jan 2007

The Phylum Cnidaria: A Review Of Phylogenetic Patterns And Diversity 300 Years After Linnaeus, Catherine S. Mcfadden, Marymegan Daly, Mercer R. Brugler, Paulyn Cartwright, Allen G. Collins, Michael N. Dawson, Daphne G. Fautin, Scott C. France, Dennis M. Opresko, Estefania Rodriguez, Sandra L. Romano, Joel L. Stake

All HMC Faculty Publications and Research

Systema Naturae includes representatives of every major lineage of the animal phylum Cnidaria. However, Linnaeus did not classify the members of the phylum as is now done, and the diversity of the group is not well represented. We contrast the Linnaean perspective on cnidarian diversity with the modern, phylogenetic perspective. For each order, we detail diversity at the family level, providing phylogenetic context where possible.