Biomedical Engineering and Bioengineering Commons^™

Piezoelectric Scaffolds For Osteochondral Defect Repair, Sita Mahalakshmi Damaraju

Dissertations

Osteoarthritis is one of the most prevalent causes of disability affecting nearly 27 million Americans. Osteoarthritis is caused when extensive damage occurs to the articular cartilage later spreading to the underlying subchondral bone, resulting in osteochondral defects. The current clinical therapies aim at regenerating the hyaline cartilage, but instead fibrocartilage forms at the osteochondral defect site, which is inferior in structure and function and fails to integrate with the surrounding tissue. A biomimetic scaffold, which can provide cues similar to the native extracellular matrix, may facilitate osteochondral defect repair. Articular cartilage and bone extracellular matrix have been shown to produce …

Monitoring Of Cerebellar Injury Using Micro Ecog Signals In Ketamine/Xylazine Treated Rats, Gokhan Ordek

Dissertations

Much of the cerebellar research has been conducted in anesthetized animals, particularly using ketamine/xylazine combination in rats, and yet the absolute impact of the anesthesia on the neural circuit remains unanswered . In the current study, spontaneous electrical activity and sensory evoked potentials from the cerebellar surface with chronically implanted, flexible-substrate, multielectrode arrays in rats were collected and analyzed with the motor cortex signals. The power spectra and the intercontact coherence plots of the spontaneous activity in the awake-quiet animals extended up to 800 Hz in the cerebellum and only up to 200 Hz in the motor cortex. Ketamine/xylazine anesthesia …

Developing An Insulin Producing Tissue Using Mouse Embryonic Stem Cells, Neha Mahendrakumar Jain

Dissertations

This thesis describes derivation of pancreatic insulin producing cells (IPCs) from mouse embryonic stem cells and development of three-dimensional (3D) engineered tissue system to provide physiologic culture conditions for IPCs. Upon using a previously established protocol, IPCs have been successfully derived from mouse embryonic stem cells and characterized in vitro . IPCs not only express classical markers of pancreatic beta cells but also exhibit glucose responsive behavior. Interestingly while deriving IPCs from mouse embryonic stem cells, islet endothelial cells have also been identified and successfully isolated from the culture. Derivation of a pure population of endothelial cells expressing specific markers …

Fabrication, Testing And Analysis Of A Fatigue Sensor For Structural Health Monitoring, Subash Gokanakonda

Dissertations

A novel fatigue monitoring sensor (FMS) is designed, fabricated and tested for detecting and monitoring the fatigue damage and estimating the remaining life of structures and components subjected to cyclic loads. The concept is based on the characteristics of stress / strain life cycle relationship of engineering materials. Sensor consists of alternate slots and strips having different strain magnification factor with respect to the nominal strain. The sensor is designed in such a way that the strips will experience the strain which closely resemble the actual strain distribution in the notch or critical area of the component. The sensor can …

Characterizing Motor Control Signals In The Spinal Cord, Yi Guo

Dissertations

The main goal of this project is to develop a rodent model to study the central command signals generated in the brain and spinal cord for the control of motor function in the forearms. The nature of the central command signal has been debated for many decades with only limited progress. This thesis presents a project that investigated this problem using novel techniques. Rats are instrumented to record the control signals in their spinal cord while they are performing lever press task they are trained in. A haptic interface and wireless neural data amplifier system simultaneously collects dynamic and neural …

Rate Alterable Traumatic Brain Injury Device For Rodent Models, Radia Abdul Wahab

Dissertations

Traumatic Brain Injury (TBI) is a physical impact to the head resulting in functional deficits in memory and motor systems. TBI is a prevalent problem occurring in 1.7 million people annually in the United States (Faul et al. 2010). TBIs can differ greatly in terms of the biomechanics of the impact such as magnitude, direction and rate. Indeed, it is likely that the wide range of TBI outcomes may be due to the physical characteristics of the trauma. Studies to date on impact have used injury devices with limited alterable parameters. Therefore, the existing impact studies have considered the effect …

The Effect Of Mechanical Vestibular Stimulation On Muscle Tone And Spasticity In Individuals With Neurological Impairment, Ghaith J. Androwis

Dissertations

In the desire to better understand spasticity mainly in Cerebral Palsy (CP) and to examine vestibular stimulation as a future intervention for .muscle tone reduction, and to be able to describe the change in level of spasticity in subjects with disability and describe interventions effects, a series of experiments are done on children with spasticity. In addition to understanding the otoliths in the vestibular system and their projections, properties and pathways a more important major objective of this work is to validate the changes in otoliths signal caused by vestibular stimulation based on the Equilibrium Point Hypothesis and the inclusion …

Construction And Assessment Of A Computer Graphics-Based Model For Wheelchair Propulsion, Brooke Marie Odle

Dissertations

Upper limb overuse injuries are common in manual wheelchair using persons with spinal cord injury (SCI), especially those with tetraplegia. Biomechanical analyses involving kinetics, kinematics, and muscle mechanics provide an opportunity to identify modifiable risk factors associated with wheelchair propulsion and upper limb overuse injuries that may be used toward developing prevention and treatment interventions. However, these analyses are limited because they cannot estimate muscle forces in vivo. Patient-specific computer graphics-based models have enhanced biomechanical analyses by determining in vivo estimates of shoulder muscle and joint contact forces. Current models do not include deep shoulder muscles. Also, patient-specific models …

Fabrication And Evaluation Of A Collagen-Based Fiber-Gel Three-Dimensional Construct For Peripheral Nerve Repair, Mevan Lakmal Siriwardane

Dissertations

Nerve regeneration following a peripheral nerve injury often relies on growth cone- mediated guidance and the presence of Schwann cells to support the regenerating axons and remyelinate portions of denervated nerve pathways. The emphasis of this work is to develop a synthetic nervous tissue construct that contains similar basal lamina or extracellular matrix to peripheral nerve in order to achieve a level of effectiveness in nerve repair and future peripheral nerve regeneration applications. To this end, three- dimensional nervous tissue constructs consisting of type I collagen are fabricated into a composite biomaterial scaffold to promote contact-guided growth of neuronal and …

Quantification Of Neural Substrates Of Vergence System Via Fmri, Yelda Alkan

Dissertations

Vergence eye movement is one of the oculomotor systems which allow depth perception via disconjugate movement of the eyes. Neuroimaging methods such as functional magnetic resonance imaging (fMRI) measure neural activity changes activity in the brain while subjects perform experimental tasks. A rich body of primate investigations on vergence is already established in the neurophysiology literature; on the other hand, there are a limited number of fMRI studies on neural mechanisms behind the vergence system.

The results demonstrated that vergence system shares neural sources and also shows differentiation within the boundaries of frontal eye fields (FEF) and midbrain of the …

Virtual Reality Visual Feedback And Its Effect On Brain Excitability, Soha Saleh

Dissertations

This dissertation examines manipulation of visual feedback in virtual reality (VR) to increase excitability of distinct neural networks in the sensorimotor cortex. The objective is to explore neural responses to visual feedback of motor activities performed in complex virtual environments during functional magnetic resonance imaging (fMRI), and to identify sensory manipulations that could further optimize VR rehabilitation of persons with hemiparesis. In addition, the effects of VR therapy on brain reorganization are investigated. An MRI-compatible VR system is used to provide subjects with online visual feedback of their hand movement. First, the author develops a protocol to analyze variability in …

Upper Extremity Rehabilitation Using Interactive Virtual Environments, Qinyin Qiu

Dissertations

Stroke affects more than 700,000 people annually in the U.S. It is the leading cause of major disability. Recovery of upper extremity function remains particularly resistant to intervention, with 80% to 95% of persons demonstrating residual upper extremity impairments lasting beyond six months after the stroke. The NJIT Robot Assistive Virtual Rehabilitation (NJIT-RAVR) system has been developed to study optimal strategies for rehabilitation of arm and hand function. Several commercial available devices, such as HapticMaster™, Cyberglove™, trakSTAR™ and Cybergrasp™, have been integrated and 11 simulations were developed to allow users to interact with virtual environments. Visual interfaces used in these …

Cerebral Spasticity Modeled As Disorded Equilibrium Point Control, Darnell Simon

Dissertations

Spasticity is a highly complex phenomenon, which has not been defined in precise and quantifiable terms. Although the muscle stretch reflex is thought to play an important role in spasticity generation, the pathophysiologic basis of spasticity is not completely understood. A valid measure of spasticity is one that is chosen within the context of a theory describing the physiological mechanisms underlying the control of posture and movement in healthy individuals and possible impairments of these mechanisms leading to motor disorders. This research’s goal was to determine the role of stretch reflex threshold in the regulation of impaired motor control through …

The Impact Of Dynamic And Passive Standing On Bone Mineral Density And Appositional Growth In Immobilized Children, Megan Diane Damcott

Dissertations

The first discovery of the potential role that mechanical loading has on determining the strength of bone occurred in 1892. However, for almost a century after this discovery, the specific mechanisms influenced by mechanical loading remained locked in a mysterious 'black box'. Then in the 1960s, the 'black box' was opened and continued work has now unlocked the basic mechanisms involved in mechanical loading and whole-bone strength. This increased knowledge has spurred clinicians and researchers to investigate the impact of weight-bearing interventions on individuals with an increased risk of osteoporosis. The most common weight-bearing clinical intervention used in non-ambulant populations …

A 3-Dimensional Vascularized Cardiac Tri-Culture Model Using Chitosan Nanofiber Scaffolds, Ali Hussain

Dissertations

The development of an in vitro tissue model that can mimic the 3-dimenisonal (3-D) cellular architecture and mosaic of myocardial tissue holds great value for cardiac tissue engineering, modeling, and cardiovascular drug screening applications. The main objective of this project was to develop a 3-D vascularized cardiac tissue model in vitro for improved survival and function.

The cellular mosaic of the myocardial tissue demands the intricate integration of an extracellular matrix-like scaffold, cellular constituents, and biological factors. The first aim of the research was to fabricate and characterize a biodegradable chitosan nanofiber scaffold that would resemble the extracellular matrix (ECM) …

Modeling Of Equilibrium Point Trajectory Control In Human Arm Movements, Kai Chen

Dissertations

The underlying concept of the Equilibrium Point Hypothesis (EPH) is that the CNS provides a virtual trajectory of joint motion, representing spacing and timing, with actual movement dynamics being produced by interactions of limb inertia, muscle viscosity and speed/position feedback from muscle spindles. To counter criticisms of the EPH, investigators have proposed the use of complex virtual trajectories, non-linear damping, stiffness and time varying stiffness to the EPH model. While these features allow the EPH to adequately produce human joint velocities, they conflict with the EPH’s premise of simple pre-planned monotonic control of movement trajectory. As a result, this study …

Direct Forcing And Heating Immersed Boundary- Lattice Boltzmann Method For Arterial Wall Thermography, Oluyinka Olugbenga Bamiro

Dissertations

Vulnerable atherosclerotic plaques have high probability of rupture and are characterized by non-homogenous temperature along the arterial wall. The nonhomogeneous temperature is attributed to the accumulation of heat releasing inflammatory cells in the arterial wall. Rupture of the vulnerable plaque can lead to acute coronary syndrome and sudden cardiac death. Arterial wall thermography (AWT) can be applied to detect the presence of temperature hot spots along the arterial wall by using temperature measurement devices and provide an early detection of a vulnerable atherosclerotic plaque. AWT, however, is invasive in nature.

Computational fluid and heat transport models provide a more efficient …

Sensorimotor Experience In Virtual Environments, Katherine Grace August

Dissertations

The goal of rehabilitation is to reduce impairment and provide functional improvements resulting in quality participation in activities of life, Plasticity and motor learning principles provide inspiration for therapeutic interventions including movement repetition in a virtual reality environment, The objective of this research work was to investigate functional specific measurements (kinematic, behavioral) and neural correlates of motor experience of hand gesture activities in virtual environments stimulating sensory experience (VE) using a hand agent model. The fMRI compatible Virtual Environment Sign Language Instruction (VESLI) System was designed and developed to provide a number of rehabilitation and measurement features, to identify optimal …

Novel Model Of Cerebrospinal Fluid Dynamics Based On Hemodynamically Driven Cyclic Brain Compliance Variation, Bruno A. Mantilla

Dissertations

This study provides a novel explanation for the CerebrQ-Spinal Fluid (CSF) flow pattern observed in phase contrast cine-MRJ studies. CSF dynamics has been traditionally explained as a bulk flow from the site of production to the site of absorption. Studies done with phase contrast cine-MRI show a more complex CSF movement, that is not explainable by the bulk flow paradigm. This study describes a mechanism explaining how the energy delivered by the heart in each cycle is responsible not only for the blood flow, but also for the CSF circulation. This mechanism is based on a cyclic variation of brain …

Central And Peripheral Autonomic Influences : Analysis Of Cardio-Pulmonary Dynamics Using Novel Wavelet Statistical Methods, Anne Marie Petrock

Dissertations

The development and implementation of novel signal processing techniques, particularly with regard to applications in the clinical environment, is critical to bringing computer-aided diagnoses of disease to reality. One of the most confounding factors in the field of cardiac autonomic response (CAR) research is the influence of the coupling of respiratory oscillations with cardiac oscillations.

This research had three objectives. The first was the assessment of central autonomic influence over heart rate oscillations when the pulmonary system is damaged. The second was to assess the link between peripheral and central autonomic control schema by evaluating the heart rate variability (HRV) …

Characterization Of Hypertension Through Multivariate Analysis Utilizing Linear And Nonlinear Methods, Diane L. Donnelly

Dissertations

Analysis of blood pressure by nonlinear methods is vastly underutilized in current research. As such, 24-hour ambulatory blood pressure data from a small cohort of borderline hypertensive and normotensive subjects were analyzed using linear and nonlinear methods. Data were collected and provided by researchers from Columbia University. The cohort size was twelve subjects, consisting of two groups of six each. Although disease state was known, group membership for individual subjects was not. Therefore, one aspect of this research was to separate the cohort, a-priori, into two distinct, evenly sized groups, based solely on analysis results. Separation was accomplished by the …

Characterization Of Mismatch Between Behavioral Stimuli And Frmi Data Using The Kalman Filter, Jason Steffener

Dissertations

The advance of blood oxygen level dependent function magnetic resonance imaging, (BOLD fMRI), allows researchers to non-invasively investigate the functioning human brain. The BOLD fMRI response to brief stimuli is called the hemodynamic response function (HRF), which can vary across brain regions and across subjects.

Models of the HRF are used to increase sensitivity of statistical maps; however, they often don't account for spatial and temporal variance. Physiological effects, such as learning, fatigue or habituation, introduce mismatch between statistical models and the data. Methods that use minimal a priori information and track time varying signals are able to show the …