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Full-Text Articles in Biomedical Engineering and Bioengineering

Neural Correlates Of Multisensory Integration For Feedback Stabilization Of The Wrist, Aaron J. Suminski, Raymond C. Doudlah, Robert A. Scheidt May 2022

Neural Correlates Of Multisensory Integration For Feedback Stabilization Of The Wrist, Aaron J. Suminski, Raymond C. Doudlah, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

Robust control of action relies on the ability to perceive, integrate, and act on information from multiple sensory modalities including vision and proprioception. How does the brain combine sensory information to regulate ongoing mechanical interactions between the body and its physical environment? Some behavioral studies suggest that the rules governing multisensory integration for action may differ from the maximum likelihood estimation rules that appear to govern multisensory integration for many perceptual tasks. We used functional magnetic resonance (MR) imaging techniques, a MR-compatible robot, and a multisensory feedback control task to test that hypothesis by investigating how neural mechanisms involved in …


Eeg And Fmri Coupling And Decoupling Based On Joint Independent Component Analysis (Jica), Nicholas Heugel, Scott A. Beardsley, Einat Liebenthal Mar 2022

Eeg And Fmri Coupling And Decoupling Based On Joint Independent Component Analysis (Jica), Nicholas Heugel, Scott A. Beardsley, Einat Liebenthal

Biomedical Engineering Faculty Research and Publications

Background

Meaningful integration of functional magnetic resonance imaging (fMRI) and electroencephalography (EEG) requires knowing whether these measurements reflect the activity of the same neural sources, i.e., estimating the degree of coupling and decoupling between the neuroimaging modalities.

New method

This paper proposes a method to quantify the coupling and decoupling of fMRI and EEG signals based on the mixing matrix produced by joint independent component analysis (jICA). The method is termed fMRI/EEG-jICA.

Results

fMRI and EEG acquired during a syllable detection task with variable syllable presentation rates (0.25–3 Hz) were separated with jICA into two spatiotemporally distinct components, a primary …


Comparison Of Whole-Head Functional Near-Infrared Spectroscopy With Functional Magnetic Resonance Imaging And Potential Application In Pediatric Neurology, Julie C. Wagner, Anthony Zinos, Wei-Liang Chen, Lisa Conant, Marsha Malloy, Joseph Heffernan, Brendan Quirk, Jeffrey Sugar, Robert W. Prost, Julian B. Whelan, Scott A. Beardsley, Harry T. Whelan Sep 2021

Comparison Of Whole-Head Functional Near-Infrared Spectroscopy With Functional Magnetic Resonance Imaging And Potential Application In Pediatric Neurology, Julie C. Wagner, Anthony Zinos, Wei-Liang Chen, Lisa Conant, Marsha Malloy, Joseph Heffernan, Brendan Quirk, Jeffrey Sugar, Robert W. Prost, Julian B. Whelan, Scott A. Beardsley, Harry T. Whelan

Biomedical Engineering Faculty Research and Publications

Background

Changes in cerebral blood flow in response to neuronal activation can be measured by time-dependent fluctuations in hemoglobin species within the brain; this is the basis of functional magnetic resonance imaging (fMRI) and functional near-infrared spectroscopy (fNIRS). There is a clinical need for portable neural imaging systems, such as fNIRS, to accommodate patients who are unable to tolerate an MR environment.

Objective

Our objective was to compare task-related full-head fNIRS and fMRI signals across cortical regions.

Methods

Eighteen healthy adults completed a same-day fNIRS-fMRI study, in which they performed right- and left-hand finger tapping tasks and a semantic-decision tones-decision …


Characterization Of Neuroimage Coupling Between Eeg And Fmri Using Within-Subject Joint Independent Component Analysis, Nicholas Heugel Apr 2020

Characterization Of Neuroimage Coupling Between Eeg And Fmri Using Within-Subject Joint Independent Component Analysis, Nicholas Heugel

Dissertations (1934 -)

The purpose of this dissertation was to apply joint independent component analysis (jICA) to electroencephalography (EEG) and functional magnetic resonance imaging (fMRI) to characterize the neuroimage coupling between the two modalities. EEG and fMRI are complimentary imaging techniques which have been used in conjunction to investigate neural activity. Understanding how these two imaging modalities relate to each other not only enables better multimodal analysis, but also has clinical implications as well. In particular, Alzheimer’s, Parkinson’s, hypertension, and ischemic stroke are all known to impact the cerebral blood flow, and by extension alter the relationship between EEG and fMRI. By characterizing …


Method For Spatial Overlap Estimation Of Electroencephalography And Functional Magnetic Resonance Imaging Responses, N. Heugel, E. Liebenthal, Scott A. Beardsley Dec 2019

Method For Spatial Overlap Estimation Of Electroencephalography And Functional Magnetic Resonance Imaging Responses, N. Heugel, E. Liebenthal, Scott A. Beardsley

Biomedical Engineering Faculty Research and Publications

Background

Simultaneous functional magnetic resonance imaging (fMRI) and electroencephalography (EEG) measurements may represent activity from partially divergent neural sources, but this factor is seldom modeled in fMRI-EEG data integration.

New method

This paper proposes an approach to estimate the spatial overlap between sources of activity measured simultaneously with fMRI and EEG. Following the extraction of task-related activity, the key steps include, 1) distributed source reconstruction of the task-related ERP activity (ERP source model), 2) transformation of fMRI activity to the ERP spatial scale by forward modelling of the scalp potential field distribution and backward source reconstruction (fMRI source simulation) …


A Fourier Description Of Covariance, And Separation Of Simultaneously Encoded Slices With In-Plane Acceleration In Fmri, Mary C. Kociuba Oct 2016

A Fourier Description Of Covariance, And Separation Of Simultaneously Encoded Slices With In-Plane Acceleration In Fmri, Mary C. Kociuba

Dissertations (1934 -)

Functional magnetic resonance imaging (fMRI) studies aim to identify localized neural regions associated with a cognitive task performed by the subject. An indirect measure of the brain activity is the blood oxygenation level dependent (BOLD) signal fluctuations observed within the complex-valued spatial frequencies measured over time. The standard practice in fMRI is to discard the phase information after image reconstruction, even with evidence of biological task-related change in the phase time-series. In the first aim of this dissertation, a complex-valued time-series covariance is derived as a linear combination of second order temporal Fourier frequency coefficients. As opposed to magnitude-only analysis, …


Alterations In Cortical Sensorimotor Connectivity Following Complete Cervical Spinal Cord Injury: A Prospective Resting-State Fmri Study, Akinwunmi Oni-Orisan, Mayank Kaushal, Wenjun Li, Jack Leschke, B. Douglas Ward, Aditya Vedantam, Benjamin Kalinosky, Matthew D. Budde, Brian D. Schmit, Shi-Jiang Li, Viashnavi Muqeet, Shekar N. Kurpad Mar 2016

Alterations In Cortical Sensorimotor Connectivity Following Complete Cervical Spinal Cord Injury: A Prospective Resting-State Fmri Study, Akinwunmi Oni-Orisan, Mayank Kaushal, Wenjun Li, Jack Leschke, B. Douglas Ward, Aditya Vedantam, Benjamin Kalinosky, Matthew D. Budde, Brian D. Schmit, Shi-Jiang Li, Viashnavi Muqeet, Shekar N. Kurpad

Biomedical Engineering Faculty Research and Publications

Functional magnetic resonance imaging (fMRI) studies have demonstrated alterations during task-induced brain activation in spinal cord injury (SCI) patients. The interruption to structural integrity of the spinal cord and the resultant disrupted flow of bidirectional communication between the brain and the spinal cord might contribute to the observed dynamic reorganization (neural plasticity). However, the effect of SCI on brain resting-state connectivity patterns remains unclear. We undertook a prospective resting-state fMRI (rs-fMRI) study to explore changes to cortical activation patterns following SCI. With institutional review board approval, rs-fMRI data was obtained in eleven patients with complete cervical SCI (>2 years …


A Novel Fmri Paradigm Suggests That Pedaling-Related Brain Activation Is Altered After Stroke, Nutta-On Promjunyakul, Brian D. Schmit, Sheila M. Schindler-Ivens Jan 2015

A Novel Fmri Paradigm Suggests That Pedaling-Related Brain Activation Is Altered After Stroke, Nutta-On Promjunyakul, Brian D. Schmit, Sheila M. Schindler-Ivens

Physical Therapy Faculty Research and Publications

The purpose of this study was to examine the feasibility of using functional magnetic resonance imaging (fMRI) to measure pedaling-related brain activation in individuals with stroke and age-matched controls. We also sought to identify stroke-related changes in brain activation associated with pedaling. Fourteen stroke and 12 control subjects were asked to pedal a custom, MRI-compatible device during fMRI. Subjects also performed lower limb tapping to localize brain regions involved in lower limb movement. All stroke and control subjects were able to pedal while positioned for fMRI. Two control subjects were withdrawn due to claustrophobia, and one control data set was …


Supraspinal Control Of Unilateral Locomotor Performance: An Fmri Study Using A Custom Pedaling Device, Brett Arand Oct 2013

Supraspinal Control Of Unilateral Locomotor Performance: An Fmri Study Using A Custom Pedaling Device, Brett Arand

Master's Theses (2009 -)

This study aimed to develop a novel unilateral pedaling device, validate its function, and use it in an fMRI study of bilateral vs. unilateral locomotor control. The new device is MRI compatible and allows for conventional coupled bilateral pedaling, along with decoupled unilateral pedaling. It was designed with an assistance mechanism to simulate the presence of the non-contributing leg while pedaling unilaterally. During coupled bilateral pedaling, the two legs work in unison: while one leg is extending in the downstroke, it provides support to lift the other leg back up as it is flexing in the upstroke. The device uses …


Changes In Hemodynamic Responses In Chronic Stroke Survivors Do Not Affect Fmri Signal Detection In A Block Experimental Design, Nutta-On Promjunyakul, Brian D. Schmit, Sheila Schindler-Ivens Sep 2013

Changes In Hemodynamic Responses In Chronic Stroke Survivors Do Not Affect Fmri Signal Detection In A Block Experimental Design, Nutta-On Promjunyakul, Brian D. Schmit, Sheila Schindler-Ivens

Physical Therapy Faculty Research and Publications

The use of canonical functions to model BOLD-fMRI data in people post-stroke may lead to inaccurate descriptions of task-related brain activity. The purpose of this study was to determine whether the spatiotemporal profile of hemodynamic responses (HDRs) obtained from stroke survivors during an event-related experiment could be used to develop individualized HDR functions that would enhance BOLD-fMRI signal detection in block experiments. Our long term goal was to use this information to develop individualized HDR functions for stroke survivors that could be used to analyze brain activity associated with locomotor-like movements. We also aimed to examine the reproducibility of HDRs …


The Effects Of Separating Visual And Motor Workspaces On The Generalization Of Visuomotor Adaptation Across Movement Conditions, Yuming Lei Jul 2013

The Effects Of Separating Visual And Motor Workspaces On The Generalization Of Visuomotor Adaptation Across Movement Conditions, Yuming Lei

Master's Theses (2009 -)

Separating visual and proprioceptive information in terms of workspace locations during reaching movement has been shown to disturb transfer of visuomotor adaptation across the arms. Here, we investigated whether separating visual and motor workspaces would also disturb generalization of visuomotor adaptation across movement conditions within the same arm. In our behavioral study, subjects were divided into four experimental groups (plus three control groups). The first two groups adapted to a visual rotation under a "dissociation" condition in which the targets for reaching movement were presented in midline while their arm performed reaching movement laterally. Following that, they were tested in …


Comparison Of Randomized Multifocal Mapping And Temporal Phase Mapping Of Visual Cortex For Clinical Use, Yan Ma, B. Douglas Ward, Kristina M. Ropella, Edgar A. Deyoe Jan 2013

Comparison Of Randomized Multifocal Mapping And Temporal Phase Mapping Of Visual Cortex For Clinical Use, Yan Ma, B. Douglas Ward, Kristina M. Ropella, Edgar A. Deyoe

Biomedical Engineering Faculty Research and Publications

fMRI is becoming an important clinical tool for planning and guidance of surgery to treat brain tumors, arteriovenous malformations, and epileptic foci. For visual cortex mapping, the most popular paradigm by far is temporal phase mapping, although random multifocal stimulation paradigms have drawn increased attention due to their ability to identify complex response fields and their random properties. In this study we directly compared temporal phase and multifocal vision mapping paradigms with respect to clinically relevant factors including: time efficiency, mapping completeness, and the effects of noise. Randomized, multifocal mapping accurately decomposed the response of single voxels to multiple stimulus …


Pedaling-Related Brain Activation In People Post-Stroke: An Fmri Study, Nutta-On Promjunyakul Oct 2012

Pedaling-Related Brain Activation In People Post-Stroke: An Fmri Study, Nutta-On Promjunyakul

Dissertations (1934 -)

This study aimed to enhance our understanding of supraspinal control of locomotion in stroke survivors and its relationship to locomotor impairment. We focused mainly on the locomotor component of walking, which involves rhythmic, reciprocal, flexion and extension movements of multiple joints in both legs. Functional magnetic resonance imaging (fMRI) was used to record human brain activity while pedaling was used as a model of locomotion. First, we examined the spatiotemporal characteristics of hemodynamic responses recorded with fMRI and found that they were different in stroke survivors and control subjects. However, these differences were not substantial enough to require altering the …


Integration Of Eeg-Fmri In An Auditory Oddball Paradigm Using Joint Independent Component Analysis, Jain Mangalathu Arumana Jul 2012

Integration Of Eeg-Fmri In An Auditory Oddball Paradigm Using Joint Independent Component Analysis, Jain Mangalathu Arumana

Dissertations (1934 -)

The integration of event-related potential (ERP) and functional magnetic resonance imaging (fMRI) can contribute to characterizing neural networks with high temporal and spatial resolution. The overall objective of this dissertation is to determine the sensitivity and limitations of joint independent component analysis (jICA) within-subject for integration of ERP and fMRI data collected simultaneously in a parametric auditory oddball paradigm. The main experimental finding in this work is that jICA revealed significantly stronger and more extensive activity in brain regions associated with the auditory P300 ERP than a P300 linear regression analysis, both at the group level and within-subject. The results …


Within-Subject Joint Independent Component Analysis Of Simultaneous Fmri/Erp In An Auditory Oddball Paradigm, Jain Mangalathu-Arumana, Scott A. Beardsley, E. Liebenthal May 2012

Within-Subject Joint Independent Component Analysis Of Simultaneous Fmri/Erp In An Auditory Oddball Paradigm, Jain Mangalathu-Arumana, Scott A. Beardsley, E. Liebenthal

Biomedical Engineering Faculty Research and Publications

The integration of event-related potential (ERP) and functional magnetic resonance imaging (fMRI) can contribute to characterizing neural networks with high temporal and spatial resolution. This research aimed to determine the sensitivity and limitations of applying joint independent component analysis (jICA) within-subjects, for ERP and fMRI data collected simultaneously in a parametric auditory frequency oddball paradigm. In a group of 20 subjects, an increase in ERP peak amplitude ranging 1–8 μV in the time window of the P300 (350–700 ms), and a correlated increase in fMRI signal in a network of regions including the right superior temporal and supramarginal gyri, was …


Investigation Of Spatio-Temporal Effects Of Fmri Visual Field Mapping Techniques On V1, John J. Janik Oct 2011

Investigation Of Spatio-Temporal Effects Of Fmri Visual Field Mapping Techniques On V1, John J. Janik

Dissertations (1934 -)

Blood oxygenation level dependent functional magnetic resonance imaging has been used extensively for mapping the representation of the visual field within the human brain. Visual field mapping using fMRI has been used clinically to assess patients with cortical pathology and to plan surgical treatment impacting the visual system. The accuracy of fMRI-based visual field mapping methods needs to be better understood for clinical use. This accuracy can be important for presurgical mapping of brain function near a tumor resection site since inaccurate rendition of the underlying neural function could lead to inappropriate resection of viable brain tissue. The most widely …


Design And Validation Of An Mr Conditional Upper Extremity Evaluation System To Study Brain Activation Patterns After Stroke, Rubing Xu Aug 2010

Design And Validation Of An Mr Conditional Upper Extremity Evaluation System To Study Brain Activation Patterns After Stroke, Rubing Xu

Master's Theses (2009 -)

Stroke is the third leading cause of death and second most frequent cause of disability in the United States. Stroke rehabilitation methods have been developed to induce the cortical reorganization and motor-relearning that leads to stroke recovery. In this thesis, we designed and developed an MR conditional upper extremity reach and grasp movement evaluation system for the stroke survivors to study their kinematic performances in reach and grasp movement and the relationship between kinematic metrics and the recovery level measured by clinical assessment methods. We also applied the system into the functional MRI experiments to identify the ability to study …


Design And Validation Of A Mr-Compatible Pneumatic Manipulandum, Aaron J. Suminski, Janice L. Zimbelman, Robert A. Scheidt Jul 2007

Design And Validation Of A Mr-Compatible Pneumatic Manipulandum, Aaron J. Suminski, Janice L. Zimbelman, Robert A. Scheidt

Biomedical Engineering Faculty Research and Publications

The combination of functional MR imaging and novel robotic tools may provide unique opportunities to probe the neural systems underlying motor control and learning. Here, we describe the design and validation of a MR-compatible, 1 degree-of-freedom pneumatic manipulandum along with experiments demonstrating its safety and efficacy. We first validated the robot's ability to apply computer-controlled loads about the wrist, demonstrating that it possesses sufficient bandwidth to simulate torsional spring-like loads during point-to-point flexion movements. Next, we verified the MR-compatibility of the device by imaging a head phantom during robot operation. We observed no systematic differences in two measures of MRI …